RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 RBM6P78332 1123 aaKnown RBP29.98■■■□□ 2.39
TRAPPC11-203ENST00000504526 TRPC5Q9UL62 973 aaPredicted RBP29.98■■■□□ 2.39
TRAPPC11-203ENST00000504526 BRD4O60885 1362 aaPredicted RBP29.98■■■□□ 2.39
TRAPPC11-203ENST00000504526 CDK12Q9NYV4 1490 aaPredicted RBP29.98■■■□□ 2.39
TRAPPC11-203ENST00000504526 ATAD2Q6PL18 1390 aa29.96■■■□□ 2.39
TRAPPC11-203ENST00000504526 CABP1Q9NZU7 370 aa29.96■■■□□ 2.39
TRAPPC11-203ENST00000504526 ABCA3Q99758 1704 aa29.96■■■□□ 2.39
TRAPPC11-203ENST00000504526 CCER1Q8TC90 406 aaPredicted RBP29.95■■■□□ 2.39
TRAPPC11-203ENST00000504526 PLEKHG5O94827 1062 aa29.94■■■□□ 2.38
TRAPPC11-203ENST00000504526 BCL9LQ86UU0 1499 aa29.93■■■□□ 2.38
TRAPPC11-203ENST00000504526 SLIT2O94813 1529 aa29.93■■■□□ 2.38
TRAPPC11-203ENST00000504526 ATRNO75882 1429 aa29.93■■■□□ 2.38
TRAPPC11-203ENST00000504526 SLC24A1O60721 1099 aa29.92■■■□□ 2.38
TRAPPC11-203ENST00000504526 UNC5CLQ8IV45 518 aa29.9■■■□□ 2.38
TRAPPC11-203ENST00000504526 USP6P35125 1406 aa29.88■■■□□ 2.37
TRAPPC11-203ENST00000504526 ZNF692Q9BU19 519 aaPredicted RBP29.88■■■□□ 2.37
TRAPPC11-203ENST00000504526 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.88■■■□□ 2.37
TRAPPC11-203ENST00000504526 ABTB2Q8N961 1025 aa29.87■■■□□ 2.37
TRAPPC11-203ENST00000504526 PUS7Q96PZ0 661 aaKnown RBP29.87■■■□□ 2.37
TRAPPC11-203ENST00000504526 CRYBG1Q9Y4K1 1723 aa29.85■■■□□ 2.37
TRAPPC11-203ENST00000504526 ST20-MTHFSA0A0A6YYL1 179 aa29.85■■■□□ 2.37
TRAPPC11-203ENST00000504526 FAM83GA6ND36 823 aa29.84■■■□□ 2.37
TRAPPC11-203ENST00000504526 NWD2Q9ULI1 1742 aa29.83■■■□□ 2.37
TRAPPC11-203ENST00000504526 NLRP13Q86W25 1043 aa29.83■■■□□ 2.37
TRAPPC11-203ENST00000504526 RGS12O14924 1447 aa29.82■■■□□ 2.36
TRAPPC11-203ENST00000504526 NUTM2GQ5VZR2 741 aa29.82■■■□□ 2.36
TRAPPC11-203ENST00000504526 GJD4Q96KN9 370 aaPredicted RBP29.82■■■□□ 2.36
TRAPPC11-203ENST00000504526 TESK2Q96S53 571 aa29.82■■■□□ 2.36
TRAPPC11-203ENST00000504526 USP47Q96K76 1375 aa29.81■■■□□ 2.36
TRAPPC11-203ENST00000504526 PLCH1Q4KWH8 1693 aa29.81■■■□□ 2.36
TRAPPC11-203ENST00000504526 SSH2Q76I76 1423 aa29.8■■■□□ 2.36
TRAPPC11-203ENST00000504526 COL14A1Q05707 1796 aaKnown RBP29.8■■■□□ 2.36
TRAPPC11-203ENST00000504526 USP19O94966 1318 aa29.8■■■□□ 2.36
TRAPPC11-203ENST00000504526 PHRF1Q9P1Y6 1649 aaKnown RBP29.8■■■□□ 2.36
TRAPPC11-203ENST00000504526 CPSF1Q10570 1443 aaKnown RBP29.79■■■□□ 2.36
TRAPPC11-203ENST00000504526 PRDM11Q9NQV5 511 aa29.79■■■□□ 2.36
TRAPPC11-203ENST00000504526 VPS72Q15906 364 aa29.78■■■□□ 2.36
TRAPPC11-203ENST00000504526 AKAP12Q02952 1782 aa29.77■■■□□ 2.36
TRAPPC11-203ENST00000504526 BTG4Q9NY30 223 aa29.76■■■□□ 2.35
TRAPPC11-203ENST00000504526 KTN1Q86UP2 1357 aaKnown RBP29.76■■■□□ 2.35
TRAPPC11-203ENST00000504526 KIAA0232Q92628 1395 aa29.76■■■□□ 2.35
TRAPPC11-203ENST00000504526 TTC21AQ8NDW8 1320 aa29.75■■■□□ 2.35
TRAPPC11-203ENST00000504526 TTC21BQ7Z4L5 1316 aa29.74■■■□□ 2.35
TRAPPC11-203ENST00000504526 NLRP6P59044 892 aa29.74■■■□□ 2.35
TRAPPC11-203ENST00000504526 TMC1Q8TDI8 760 aa29.74■■■□□ 2.35
TRAPPC11-203ENST00000504526 ZC3H6P61129 1189 aaKnown RBP29.73■■■□□ 2.35
TRAPPC11-203ENST00000504526 HDGFL2Q7Z4V5 671 aaPredicted RBP29.73■■■□□ 2.35
TRAPPC11-203ENST00000504526 NINLQ9Y2I6 1382 aa29.73■■■□□ 2.35
TRAPPC11-203ENST00000504526 NRKQ7Z2Y5 1582 aa29.73■■■□□ 2.35
TRAPPC11-203ENST00000504526 GCP02774 474 aa29.72■■■□□ 2.35
TRAPPC11-203ENST00000504526 TMF1P82094 1093 aa29.72■■■□□ 2.35
TRAPPC11-203ENST00000504526 CPDO75976 1380 aa29.72■■■□□ 2.35
TRAPPC11-203ENST00000504526 TERF2IPQ9NYB0 399 aa29.71■■■□□ 2.35
TRAPPC11-203ENST00000504526 CCDC9Q9Y3X0 531 aaKnown RBP29.71■■■□□ 2.35
TRAPPC11-203ENST00000504526 GLI3P10071 1580 aa29.71■■■□□ 2.35
TRAPPC11-203ENST00000504526 NRAPQ86VF7 1730 aa29.71■■■□□ 2.35
TRAPPC11-203ENST00000504526 SLC12A5Q9H2X9 1139 aa29.7■■■□□ 2.35
TRAPPC11-203ENST00000504526 CD163L1Q9NR16 1453 aa29.68■■■□□ 2.34
TRAPPC11-203ENST00000504526 MON2Q7Z3U7 1717 aa29.68■■■□□ 2.34
TRAPPC11-203ENST00000504526 PIK3C2AO00443 1686 aa29.68■■■□□ 2.34
TRAPPC11-203ENST00000504526 SLIT3O75094 1523 aa29.67■■■□□ 2.34
TRAPPC11-203ENST00000504526 CHRNA2Q15822 529 aa29.67■■■□□ 2.34
TRAPPC11-203ENST00000504526 CDCA8Q53HL2 280 aa29.67■■■□□ 2.34
TRAPPC11-203ENST00000504526 ONECUT3O60422 494 aaPredicted RBP29.64■■■□□ 2.34
TRAPPC11-203ENST00000504526 KCNH5Q8NCM2 988 aa29.64■■■□□ 2.34
TRAPPC11-203ENST00000504526 UPF1Q92900 1129 aaKnown RBP eCLIP29.64■■■□□ 2.34
TRAPPC11-203ENST00000504526 EDC4Q6P2E9 1401 aaKnown RBP29.63■■■□□ 2.33
TRAPPC11-203ENST00000504526 A0A1W2PP64 1363 aa29.63■■■□□ 2.33
TRAPPC11-203ENST00000504526 SPATA31A5Q5VU36 1347 aa29.61■■■□□ 2.33
TRAPPC11-203ENST00000504526 SPATA31A7Q8IWB4 1347 aa29.61■■■□□ 2.33
TRAPPC11-203ENST00000504526 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.6■■■□□ 2.33
TRAPPC11-203ENST00000504526 USP31Q70CQ4 1352 aa29.6■■■□□ 2.33
TRAPPC11-203ENST00000504526 SEPT12Q8IYM1 358 aa29.59■■■□□ 2.33
TRAPPC11-203ENST00000504526 EVA1CP58658 441 aa29.58■■■□□ 2.33
TRAPPC11-203ENST00000504526 LMO7Q8WWI1 1683 aa29.58■■■□□ 2.33
TRAPPC11-203ENST00000504526 STRN4Q9NRL3 753 aa29.58■■■□□ 2.33
TRAPPC11-203ENST00000504526 AATKQ6ZMQ8 1374 aa29.57■■■□□ 2.32
TRAPPC11-203ENST00000504526 CAMTA1Q9Y6Y1 1673 aa29.56■■■□□ 2.32
TRAPPC11-203ENST00000504526 ANKRD36BQ8N2N9 1353 aa29.56■■■□□ 2.32
TRAPPC11-203ENST00000504526 EIF4G2P78344 907 aaKnown RBP eCLIP29.55■■■□□ 2.32
TRAPPC11-203ENST00000504526 FAM98CQ17RN3 349 aaKnown RBP29.54■■■□□ 2.32
TRAPPC11-203ENST00000504526 NME9Q86XW9 330 aa29.54■■■□□ 2.32
TRAPPC11-203ENST00000504526 USP54Q70EL1 1684 aa29.53■■■□□ 2.32
TRAPPC11-203ENST00000504526 SPATA31A1Q5TZJ5 1347 aa29.53■■■□□ 2.32
TRAPPC11-203ENST00000504526 ZBTB7CA1YPR0 619 aa29.53■■■□□ 2.32
TRAPPC11-203ENST00000504526 A0A0G2JS52 829 aa29.52■■■□□ 2.32
TRAPPC11-203ENST00000504526 MYT1Q01538 1121 aa29.52■■■□□ 2.32
TRAPPC11-203ENST00000504526 ARHGEF25Q86VW2 580 aa29.52■■■□□ 2.32
TRAPPC11-203ENST00000504526 COL5A2P05997 1499 aaPredicted RBP29.5■■■□□ 2.31
TRAPPC11-203ENST00000504526 NFAT5O94916 1531 aa29.5■■■□□ 2.31
TRAPPC11-203ENST00000504526 ZRANB1Q9UGI0 708 aa29.49■■■□□ 2.31
TRAPPC11-203ENST00000504526 SOX12O15370 315 aa29.48■■■□□ 2.31
TRAPPC11-203ENST00000504526 LARP1Q6PKG0 1096 aaKnown RBP29.48■■■□□ 2.31
TRAPPC11-203ENST00000504526 KRT27Q7Z3Y8 459 aa29.48■■■□□ 2.31
TRAPPC11-203ENST00000504526 OVOS2A0A0J9YW53 1432 aa29.46■■■□□ 2.31
TRAPPC11-203ENST00000504526 OVOS2Q6IE36 1432 aa29.46■■■□□ 2.31
TRAPPC11-203ENST00000504526 ABCC6O95255 1503 aa29.46■■■□□ 2.31
TRAPPC11-203ENST00000504526 HSPA5P11021 654 aaKnown RBP29.46■■■□□ 2.31
TRAPPC11-203ENST00000504526 BARGINQ6ZT62 677 aa29.46■■■□□ 2.31
TRAPPC11-203ENST00000504526 CCDC125Q86Z20 511 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms