RNA–Protein interactions for RNA: ENST00000504466.1

HMGCR-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 1,107 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-204ENST00000504466 PDE4DQ08499 809 aa9.56□□□□□ -0.88
HMGCR-204ENST00000504466 RIC3Q7Z5B4 369 aa9.56□□□□□ -0.88
HMGCR-204ENST00000504466 ZNF511Q8NB15 262 aa9.56□□□□□ -0.88
HMGCR-204ENST00000504466 BAP1Q92560 729 aa9.56□□□□□ -0.88
HMGCR-204ENST00000504466 ZBTB3Q9H5J0 574 aa9.56□□□□□ -0.88
HMGCR-204ENST00000504466 F12P00748 615 aaPredicted RBP9.54□□□□□ -0.88
HMGCR-204ENST00000504466 SNRPBP14678 240 aaKnown RBP9.54□□□□□ -0.88
HMGCR-204ENST00000504466 VARSP26640 1264 aaKnown RBP9.54□□□□□ -0.88
HMGCR-204ENST00000504466 NFX1Q12986 1120 aaKnown RBP9.53□□□□□ -0.88
HMGCR-204ENST00000504466 KIFC2Q96AC6 838 aa9.53□□□□□ -0.88
HMGCR-204ENST00000504466 ABCC9O60706 1549 aa9.52□□□□□ -0.88
HMGCR-204ENST00000504466 LINC01559Q495D7 138 aa9.52□□□□□ -0.89
HMGCR-204ENST00000504466 MYSM1Q5VVJ2 828 aa9.52□□□□□ -0.89
HMGCR-204ENST00000504466 MYO15BQ96JP2 1530 aa9.51□□□□□ -0.89
HMGCR-204ENST00000504466 WASF2Q9Y6W5 498 aa9.51□□□□□ -0.89
HMGCR-204ENST00000504466 LILRB3O75022 631 aa9.5□□□□□ -0.89
HMGCR-204ENST00000504466 WFS1O76024 890 aa9.5□□□□□ -0.89
HMGCR-204ENST00000504466 CABLES1Q8TDN4 633 aa9.5□□□□□ -0.89
HMGCR-204ENST00000504466 SLC24A3Q9HC58 644 aa9.5□□□□□ -0.89
HMGCR-204ENST00000504466 LIMD1Q9UGP4 676 aa9.5□□□□□ -0.89
HMGCR-204ENST00000504466 SHROOM4Q9ULL8 1493 aa9.49□□□□□ -0.89
HMGCR-204ENST00000504466 PLEKHG3A1L390 1219 aa9.49□□□□□ -0.89
HMGCR-204ENST00000504466 CAPN5O15484 640 aaPredicted RBP9.48□□□□□ -0.89
HMGCR-204ENST00000504466 QPCTQ16769 361 aa9.48□□□□□ -0.89
HMGCR-204ENST00000504466 TRIM46Q7Z4K8 759 aa9.48□□□□□ -0.89
HMGCR-204ENST00000504466 MAP10Q9P2G4 905 aa9.48□□□□□ -0.89
HMGCR-204ENST00000504466 PER1O15534 1290 aaPredicted RBP9.47□□□□□ -0.89
HMGCR-204ENST00000504466 CTHP32929 405 aa9.47□□□□□ -0.89
HMGCR-204ENST00000504466 CDK15Q96Q40 435 aa9.47□□□□□ -0.89
HMGCR-204ENST00000504466 TLL2Q9Y6L7 1015 aa9.47□□□□□ -0.89
HMGCR-204ENST00000504466 TERTO14746 1132 aaKnown RBP9.46□□□□□ -0.9
HMGCR-204ENST00000504466 WIPF1O43516 503 aa9.46□□□□□ -0.9
HMGCR-204ENST00000504466 LCE2CQ5TA81 110 aa9.46□□□□□ -0.9
HMGCR-204ENST00000504466 KLF16Q9BXK1 252 aaPredicted RBP9.46□□□□□ -0.9
HMGCR-204ENST00000504466 TMEM132AQ24JP5 1023 aa9.45□□□□□ -0.9
HMGCR-204ENST00000504466 FAM174AQ8TBP5 190 aa9.45□□□□□ -0.9
HMGCR-204ENST00000504466 NNTQ13423 1086 aa9.44□□□□□ -0.9
HMGCR-204ENST00000504466 CSPP1Q1MSJ5 1256 aa9.44□□□□□ -0.9
HMGCR-204ENST00000504466 FOXJ1Q92949 421 aa9.44□□□□□ -0.9
HMGCR-204ENST00000504466 RSPH6AQ9H0K4 717 aa9.44□□□□□ -0.9
HMGCR-204ENST00000504466 ADH1CP00326 375 aa9.43□□□□□ -0.9
HMGCR-204ENST00000504466 BMP1P13497 986 aa9.43□□□□□ -0.9
HMGCR-204ENST00000504466 BRPF1P55201 1214 aaPredicted RBP9.43□□□□□ -0.9
HMGCR-204ENST00000504466 C4orf48Q5BLP8 95 aa9.43□□□□□ -0.9
HMGCR-204ENST00000504466 CLK2P49760 499 aaKnown RBP9.42□□□□□ -0.9
HMGCR-204ENST00000504466 RTL5Q5HYW3 569 aaPredicted RBP9.42□□□□□ -0.9
HMGCR-204ENST00000504466 NACADO15069 1562 aa9.41□□□□□ -0.9
HMGCR-204ENST00000504466 NUTM2BA6NNL0 878 aaPredicted RBP9.41□□□□□ -0.9
HMGCR-204ENST00000504466 NUTM2EB1AL46 878 aaPredicted RBP9.41□□□□□ -0.9
HMGCR-204ENST00000504466 TIMP2P16035 220 aa9.41□□□□□ -0.9
HMGCR-204ENST00000504466 NUTM2DQ5VT03 806 aaPredicted RBP9.41□□□□□ -0.9
HMGCR-204ENST00000504466 SH3RF1Q7Z6J0 888 aa9.41□□□□□ -0.9
HMGCR-204ENST00000504466 BPHLQ86WA6 291 aaPredicted RBP9.41□□□□□ -0.9
HMGCR-204ENST00000504466 NUTM2AQ8IVF1 878 aaPredicted RBP9.41□□□□□ -0.9
HMGCR-204ENST00000504466 ARMC2Q8NEN0 867 aa9.41□□□□□ -0.9
HMGCR-204ENST00000504466 NEUROD2Q15784 382 aa9.4□□□□□ -0.9
HMGCR-204ENST00000504466 NPAS3Q8IXF0 933 aa9.4□□□□□ -0.9
HMGCR-204ENST00000504466 C1QTNF2Q9BXJ5 285 aa9.4□□□□□ -0.9
HMGCR-204ENST00000504466 GRM5P41594 1212 aa9.39□□□□□ -0.91
HMGCR-204ENST00000504466 NR5A1Q13285 461 aa9.39□□□□□ -0.91
HMGCR-204ENST00000504466 HELBQ8NG08 1087 aaPredicted RBP9.39□□□□□ -0.91
HMGCR-204ENST00000504466 WDR4P57081 412 aaKnown RBP9.38□□□□□ -0.91
HMGCR-204ENST00000504466 SH3BP5LQ7L8J4 393 aa9.38□□□□□ -0.91
HMGCR-204ENST00000504466 ZFP42Q96MM3 310 aa9.38□□□□□ -0.91
HMGCR-204ENST00000504466 NXF1Q9UBU9 619 aaKnown RBP9.38□□□□□ -0.91
HMGCR-204ENST00000504466 MRPL14Q6P1L8 145 aaKnown RBP9.37□□□□□ -0.91
HMGCR-204ENST00000504466 NBPF14Q5TI25 921 aa9.36□□□□□ -0.91
HMGCR-204ENST00000504466 TRMT44Q8IYL2 757 aaKnown RBP9.36□□□□□ -0.91
HMGCR-204ENST00000504466 TSC1Q92574 1164 aa9.36□□□□□ -0.91
HMGCR-204ENST00000504466 GPKOWQ92917 476 aaPredicted RBP eCLIP9.36□□□□□ -0.91
HMGCR-204ENST00000504466 POLR3EQ9NVU0 708 aa9.36□□□□□ -0.91
HMGCR-204ENST00000504466 MAP4K5Q9Y4K4 846 aa9.36□□□□□ -0.91
HMGCR-204ENST00000504466 NR3C2P08235 984 aa9.35□□□□□ -0.91
HMGCR-204ENST00000504466 INSM1Q01101 510 aaPredicted RBP9.35□□□□□ -0.91
HMGCR-204ENST00000504466 SKIV2LQ15477 1246 aaKnown RBP9.35□□□□□ -0.91
HMGCR-204ENST00000504466 GTF3C3Q9Y5Q9 886 aa9.35□□□□□ -0.91
HMGCR-204ENST00000504466 AGERQ15109 404 aa9.34□□□□□ -0.91
HMGCR-204ENST00000504466 CTDSPL2Q05D32 466 aa9.33□□□□□ -0.92
HMGCR-204ENST00000504466 SCARF1Q14162 830 aa9.33□□□□□ -0.92
HMGCR-204ENST00000504466 ARID5BQ14865 1188 aa9.33□□□□□ -0.92
HMGCR-204ENST00000504466 SH3D19Q5HYK7 790 aa9.33□□□□□ -0.92
HMGCR-204ENST00000504466 SLC16A10Q8TF71 515 aa9.33□□□□□ -0.92
HMGCR-204ENST00000504466 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.33□□□□□ -0.92
HMGCR-204ENST00000504466 STK17AQ9UEE5 414 aa9.33□□□□□ -0.92
HMGCR-204ENST00000504466 H3BM21 787 aa9.32□□□□□ -0.92
HMGCR-204ENST00000504466 ZIC2O95409 532 aaPredicted RBP9.32□□□□□ -0.92
HMGCR-204ENST00000504466 PPP2R2DQ66LE6 453 aa9.32□□□□□ -0.92
HMGCR-204ENST00000504466 ITPKCQ96DU7 683 aa9.32□□□□□ -0.92
HMGCR-204ENST00000504466 FBXO31Q5XUX0 539 aaPredicted RBP9.31□□□□□ -0.92
HMGCR-204ENST00000504466 PURBQ96QR8 312 aaKnown RBP9.31□□□□□ -0.92
HMGCR-204ENST00000504466 KDM4CQ9H3R0 1056 aa9.31□□□□□ -0.92
HMGCR-204ENST00000504466 ZFAND3Q9H8U3 227 aa9.31□□□□□ -0.92
HMGCR-204ENST00000504466 RB1CC1Q8TDY2 1594 aa9.3□□□□□ -0.92
HMGCR-204ENST00000504466 DDRGK1Q96HY6 314 aa9.3□□□□□ -0.92
HMGCR-204ENST00000504466 SCRIBQ14160 1630 aa9.3□□□□□ -0.92
HMGCR-204ENST00000504466 PDXDC2PQ6P474 469 aa9.29□□□□□ -0.92
HMGCR-204ENST00000504466 IRF7Q92985 503 aa9.29□□□□□ -0.92
HMGCR-204ENST00000504466 FAM117AQ9C073 453 aa9.29□□□□□ -0.92
HMGCR-204ENST00000504466 GPBP1L1Q9HC44 474 aaPredicted RBP9.29□□□□□ -0.92
HMGCR-204ENST00000504466 ERFEQ4G0M1 354 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms