RNA–Protein interactions for RNA: ENST00000504417.1

ITGA3-203, Transcript of integrin subunit alpha 3, humanhuman

TSL 3

Gene ITGA3, Length 227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-203ENST00000504417 NBPF8Q3BBV2 869 aa10.36□□□□□ -0.75
ITGA3-203ENST00000504417 PHF8Q9UPP1 1060 aa10.36□□□□□ -0.75
ITGA3-203ENST00000504417 LMO7Q8WWI1 1683 aa10.36□□□□□ -0.75
ITGA3-203ENST00000504417 BCL9LQ86UU0 1499 aa10.36□□□□□ -0.75
ITGA3-203ENST00000504417 WNK3Q9BYP7 1800 aa10.35□□□□□ -0.75
ITGA3-203ENST00000504417 RGS12O14924 1447 aa10.35□□□□□ -0.75
ITGA3-203ENST00000504417 HIRIP3Q9BW71 556 aaPredicted RBP10.35□□□□□ -0.75
ITGA3-203ENST00000504417 AFF2P51816 1311 aa10.34□□□□□ -0.75
ITGA3-203ENST00000504417 COL18A1P39060 1754 aa10.34□□□□□ -0.75
ITGA3-203ENST00000504417 XPCQ01831 940 aaPredicted RBP10.34□□□□□ -0.75
ITGA3-203ENST00000504417 POGKQ9P215 609 aa10.34□□□□□ -0.75
ITGA3-203ENST00000504417 SBNO2Q9Y2G9 1366 aa10.34□□□□□ -0.75
ITGA3-203ENST00000504417 RGPD5Q99666 1765 aa10.34□□□□□ -0.75
ITGA3-203ENST00000504417 MYOM1P52179 1685 aa10.32□□□□□ -0.76
ITGA3-203ENST00000504417 THSD7AQ9UPZ6 1657 aa10.32□□□□□ -0.76
ITGA3-203ENST00000504417 ARHGEF10O15013 1369 aa10.32□□□□□ -0.76
ITGA3-203ENST00000504417 KRT28Q7Z3Y7 464 aa10.32□□□□□ -0.76
ITGA3-203ENST00000504417 FNBP4Q8N3X1 1017 aaPredicted RBP10.32□□□□□ -0.76
ITGA3-203ENST00000504417 SLIT3O75094 1523 aa10.32□□□□□ -0.76
ITGA3-203ENST00000504417 SSH2Q76I76 1423 aa10.32□□□□□ -0.76
ITGA3-203ENST00000504417 CENPJQ9HC77 1338 aaPredicted RBP10.32□□□□□ -0.76
ITGA3-203ENST00000504417 NUTM2BA6NNL0 878 aaPredicted RBP10.31□□□□□ -0.76
ITGA3-203ENST00000504417 NUTM2EB1AL46 878 aaPredicted RBP10.31□□□□□ -0.76
ITGA3-203ENST00000504417 ZNF772Q68DY9 489 aaPredicted RBP10.31□□□□□ -0.76
ITGA3-203ENST00000504417 NUTM2AQ8IVF1 878 aaPredicted RBP10.31□□□□□ -0.76
ITGA3-203ENST00000504417 CD163L1Q9NR16 1453 aa10.3□□□□□ -0.76
ITGA3-203ENST00000504417 ROCK2O75116 1388 aaKnown RBP10.3□□□□□ -0.76
ITGA3-203ENST00000504417 PLEKHG3A1L390 1219 aa10.3□□□□□ -0.76
ITGA3-203ENST00000504417 CAPN15O75808 1086 aa10.3□□□□□ -0.76
ITGA3-203ENST00000504417 MEX3CQ5U5Q3 659 aaKnown RBP10.29□□□□□ -0.76
ITGA3-203ENST00000504417 PMFBP1Q8TBY8 1022 aa10.29□□□□□ -0.76
ITGA3-203ENST00000504417 NUDT16Q96DE0 195 aaKnown RBP10.29□□□□□ -0.76
ITGA3-203ENST00000504417 C8orf37Q96NL8 207 aa10.29□□□□□ -0.76
ITGA3-203ENST00000504417 CDK19Q9BWU1 502 aa10.29□□□□□ -0.76
ITGA3-203ENST00000504417 PPIP5K1Q6PFW1 1433 aa10.29□□□□□ -0.76
ITGA3-203ENST00000504417 LTN1O94822 1766 aa10.29□□□□□ -0.76
ITGA3-203ENST00000504417 USP6P35125 1406 aa10.28□□□□□ -0.76
ITGA3-203ENST00000504417 NEUROD1Q13562 356 aa10.28□□□□□ -0.76
ITGA3-203ENST00000504417 CPSF1Q10570 1443 aaKnown RBP10.27□□□□□ -0.77
ITGA3-203ENST00000504417 ADAMTS2O95450 1211 aa10.27□□□□□ -0.77
ITGA3-203ENST00000504417 MKRN4PQ13434 485 aaPredicted RBP10.27□□□□□ -0.77
ITGA3-203ENST00000504417 POLA2Q14181 598 aa10.27□□□□□ -0.77
ITGA3-203ENST00000504417 USP19O94966 1318 aa10.27□□□□□ -0.77
ITGA3-203ENST00000504417 NFAT5O94916 1531 aa10.27□□□□□ -0.77
ITGA3-203ENST00000504417 TONSLQ96HA7 1378 aa10.26□□□□□ -0.77
ITGA3-203ENST00000504417 PSME1Q06323 249 aa10.26□□□□□ -0.77
ITGA3-203ENST00000504417 TNS1Q9HBL0 1735 aaKnown RBP10.26□□□□□ -0.77
ITGA3-203ENST00000504417 ACEP12821 1306 aa10.26□□□□□ -0.77
ITGA3-203ENST00000504417 KIF20BQ96Q89 1820 aa10.26□□□□□ -0.77
ITGA3-203ENST00000504417 BRD4O60885 1362 aaPredicted RBP10.26□□□□□ -0.77
ITGA3-203ENST00000504417 PARP4Q9UKK3 1724 aaKnown RBP10.25□□□□□ -0.77
ITGA3-203ENST00000504417 CCDC61Q9Y6R9 512 aa10.25□□□□□ -0.77
ITGA3-203ENST00000504417 SBF2Q86WG5 1849 aa10.25□□□□□ -0.77
ITGA3-203ENST00000504417 ABCC6O95255 1503 aa10.24□□□□□ -0.77
ITGA3-203ENST00000504417 RXRBP28702 533 aa10.24□□□□□ -0.77
ITGA3-203ENST00000504417 RBM6P78332 1123 aaKnown RBP10.24□□□□□ -0.77
ITGA3-203ENST00000504417 CABLES1Q8TDN4 633 aa10.24□□□□□ -0.77
ITGA3-203ENST00000504417 CABP2Q9NPB3 220 aa10.24□□□□□ -0.77
ITGA3-203ENST00000504417 CLSPNQ9HAW4 1339 aa10.24□□□□□ -0.77
ITGA3-203ENST00000504417 CAMTA1Q9Y6Y1 1673 aa10.24□□□□□ -0.77
ITGA3-203ENST00000504417 NGLY1Q96IV0 654 aa10.23□□□□□ -0.77
ITGA3-203ENST00000504417 QTRT2Q9H974 415 aaKnown RBP10.23□□□□□ -0.77
ITGA3-203ENST00000504417 USP21Q9UK80 565 aa10.23□□□□□ -0.77
ITGA3-203ENST00000504417 TRPC5Q9UL62 973 aaPredicted RBP10.23□□□□□ -0.77
ITGA3-203ENST00000504417 CPDO75976 1380 aa10.23□□□□□ -0.77
ITGA3-203ENST00000504417 ATAD2Q6PL18 1390 aa10.23□□□□□ -0.77
ITGA3-203ENST00000504417 TESK2Q96S53 571 aa10.22□□□□□ -0.77
ITGA3-203ENST00000504417 EVC2Q86UK5 1308 aa10.22□□□□□ -0.77
ITGA3-203ENST00000504417 RGPD1P0DJD0 1748 aa10.21□□□□□ -0.77
ITGA3-203ENST00000504417 PEAK1Q9H792 1746 aa10.21□□□□□ -0.77
ITGA3-203ENST00000504417 FAM83GA6ND36 823 aa10.21□□□□□ -0.77
ITGA3-203ENST00000504417 UNC5CLQ8IV45 518 aa10.21□□□□□ -0.77
ITGA3-203ENST00000504417 NGDNQ8NEJ9 315 aaKnown RBP10.21□□□□□ -0.77
ITGA3-203ENST00000504417 LRRC37A3O60309 1634 aa10.21□□□□□ -0.78
ITGA3-203ENST00000504417 ANKRD26Q9UPS8 1709 aa10.21□□□□□ -0.78
ITGA3-203ENST00000504417 RGPD2P0DJD1 1756 aa10.2□□□□□ -0.78
ITGA3-203ENST00000504417 KIAA0232Q92628 1395 aa10.2□□□□□ -0.78
ITGA3-203ENST00000504417 UPF1Q92900 1129 aaKnown RBP eCLIP10.2□□□□□ -0.78
ITGA3-203ENST00000504417 FAM208AQ9UK61 1670 aaKnown RBP10.2□□□□□ -0.78
ITGA3-203ENST00000504417 COL5A2P05997 1499 aaPredicted RBP10.19□□□□□ -0.78
ITGA3-203ENST00000504417 SRPK2P78362 688 aaKnown RBP10.19□□□□□ -0.78
ITGA3-203ENST00000504417 VPS72Q15906 364 aa10.19□□□□□ -0.78
ITGA3-203ENST00000504417 GJD4Q96KN9 370 aaPredicted RBP10.19□□□□□ -0.78
ITGA3-203ENST00000504417 CARD11Q9BXL7 1154 aa10.19□□□□□ -0.78
ITGA3-203ENST00000504417 OVOS2A0A0J9YW53 1432 aa10.18□□□□□ -0.78
ITGA3-203ENST00000504417 OVOS2Q6IE36 1432 aa10.18□□□□□ -0.78
ITGA3-203ENST00000504417 USP47Q96K76 1375 aa10.18□□□□□ -0.78
ITGA3-203ENST00000504417 ONECUT3O60422 494 aaPredicted RBP10.18□□□□□ -0.78
ITGA3-203ENST00000504417 PUS7Q96PZ0 661 aaKnown RBP10.18□□□□□ -0.78
ITGA3-203ENST00000504417 CABP1Q9NZU7 370 aa10.18□□□□□ -0.78
ITGA3-203ENST00000504417 SHANK3Q9BYB0 1731 aa10.18□□□□□ -0.78
ITGA3-203ENST00000504417 RREB1Q92766 1687 aa10.18□□□□□ -0.78
ITGA3-203ENST00000504417 A0A1W2PP64 1363 aa10.17□□□□□ -0.78
ITGA3-203ENST00000504417 USP31Q70CQ4 1352 aa10.17□□□□□ -0.78
ITGA3-203ENST00000504417 RGPD3A6NKT7 1758 aaPredicted RBP10.17□□□□□ -0.78
ITGA3-203ENST00000504417 RGPD4Q7Z3J3 1758 aa10.17□□□□□ -0.78
ITGA3-203ENST00000504417 EDC4Q6P2E9 1401 aaKnown RBP10.16□□□□□ -0.78
ITGA3-203ENST00000504417 SPATA31A5Q5VU36 1347 aa10.16□□□□□ -0.78
ITGA3-203ENST00000504417 TTC21BQ7Z4L5 1316 aa10.16□□□□□ -0.78
ITGA3-203ENST00000504417 SPATA31A7Q8IWB4 1347 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms