RNA–Protein interactions for RNA: ENST00000504224.5

RNF4-205, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-205ENST00000504224 ALS2Q96Q42 1657 aa31.25■■■□□ 2.59
RNF4-205ENST00000504224 ARHGEF28Q8N1W1 1705 aaKnown RBP31.24■■■□□ 2.59
RNF4-205ENST00000504224 ONECUT3O60422 494 aaPredicted RBP31.24■■■□□ 2.59
RNF4-205ENST00000504224 FAM98CQ17RN3 349 aaKnown RBP31.22■■■□□ 2.59
RNF4-205ENST00000504224 CDK19Q9BWU1 502 aa31.22■■■□□ 2.59
RNF4-205ENST00000504224 DEFB132Q7Z7B7 95 aa31.21■■■□□ 2.59
RNF4-205ENST00000504224 ATP7BP35670 1465 aa31.21■■■□□ 2.59
RNF4-205ENST00000504224 PRDM11Q9NQV5 511 aa31.2■■■□□ 2.59
RNF4-205ENST00000504224 COL14A1Q05707 1796 aaKnown RBP31.19■■■□□ 2.58
RNF4-205ENST00000504224 ITSN1Q15811 1721 aa31.17■■■□□ 2.58
RNF4-205ENST00000504224 NRAPQ86VF7 1730 aa31.17■■■□□ 2.58
RNF4-205ENST00000504224 NBPF1Q3BBV0 1214 aa31.14■■■□□ 2.58
RNF4-205ENST00000504224 NUTM2GQ5VZR2 741 aa31.14■■■□□ 2.58
RNF4-205ENST00000504224 CCDC61Q9Y6R9 512 aa31.12■■■□□ 2.57
RNF4-205ENST00000504224 ACEP12821 1306 aa31.12■■■□□ 2.57
RNF4-205ENST00000504224 SPATA31A5Q5VU36 1347 aa31.12■■■□□ 2.57
RNF4-205ENST00000504224 SPATA31A7Q8IWB4 1347 aa31.12■■■□□ 2.57
RNF4-205ENST00000504224 CHRNA2Q15822 529 aa31.11■■■□□ 2.57
RNF4-205ENST00000504224 KIAA0232Q92628 1395 aa31.11■■■□□ 2.57
RNF4-205ENST00000504224 NBPF8Q3BBV2 869 aa31.1■■■□□ 2.57
RNF4-205ENST00000504224 KIAA1210Q9ULL0 1709 aa31.1■■■□□ 2.57
RNF4-205ENST00000504224 CRYBG1Q9Y4K1 1723 aa31.1■■■□□ 2.57
RNF4-205ENST00000504224 ZC3H6P61129 1189 aaKnown RBP31.09■■■□□ 2.57
RNF4-205ENST00000504224 STRN4Q9NRL3 753 aa31.08■■■□□ 2.57
RNF4-205ENST00000504224 POLR3AO14802 1390 aaPredicted RBP31.07■■■□□ 2.56
RNF4-205ENST00000504224 SRCAPQ6ZRS2 3230 aa31.06■■■□□ 2.56
RNF4-205ENST00000504224 BAG6P46379 1132 aa31.06■■■□□ 2.56
RNF4-205ENST00000504224 SRPK2P78362 688 aaKnown RBP31.06■■■□□ 2.56
RNF4-205ENST00000504224 FAM182BQ5T319 152 aa31.06■■■□□ 2.56
RNF4-205ENST00000504224 PLEKHG3A1L390 1219 aa31.05■■■□□ 2.56
RNF4-205ENST00000504224 CENPJQ9HC77 1338 aaPredicted RBP31.04■■■□□ 2.56
RNF4-205ENST00000504224 ABTB2Q8N961 1025 aa31.04■■■□□ 2.56
RNF4-205ENST00000504224 TOPAZ1Q8N9V7 1692 aa31.03■■■□□ 2.56
RNF4-205ENST00000504224 PHRF1Q9P1Y6 1649 aaKnown RBP31.02■■■□□ 2.56
RNF4-205ENST00000504224 SPATA31A1Q5TZJ5 1347 aa31■■■□□ 2.55
RNF4-205ENST00000504224 EVA1CP58658 441 aa31■■■□□ 2.55
RNF4-205ENST00000504224 CABP2Q9NPB3 220 aa31■■■□□ 2.55
RNF4-205ENST00000504224 PPIP5K1Q6PFW1 1433 aa30.98■■■□□ 2.55
RNF4-205ENST00000504224 USP35Q9P2H5 1018 aa30.98■■■□□ 2.55
RNF4-205ENST00000504224 THSD7AQ9UPZ6 1657 aa30.96■■■□□ 2.55
RNF4-205ENST00000504224 EN1Q05925 392 aaPredicted RBP30.95■■■□□ 2.55
RNF4-205ENST00000504224 L3MBTL2Q969R5 705 aa30.95■■■□□ 2.55
RNF4-205ENST00000504224 NLRP13Q86W25 1043 aa30.94■■■□□ 2.54
RNF4-205ENST00000504224 PSDA5PKW4 1024 aaPredicted RBP30.93■■■□□ 2.54
RNF4-205ENST00000504224 USP19O94966 1318 aa30.92■■■□□ 2.54
RNF4-205ENST00000504224 NRKQ7Z2Y5 1582 aa30.92■■■□□ 2.54
RNF4-205ENST00000504224 SSH2Q76I76 1423 aa30.91■■■□□ 2.54
RNF4-205ENST00000504224 SIN3AQ96ST3 1273 aa30.9■■■□□ 2.54
RNF4-205ENST00000504224 CABP1Q9NZU7 370 aa30.9■■■□□ 2.54
RNF4-205ENST00000504224 RGPD1P0DJD0 1748 aa30.9■■■□□ 2.54
RNF4-205ENST00000504224 ZBTB7CA1YPR0 619 aa30.89■■■□□ 2.54
RNF4-205ENST00000504224 GCP02774 474 aa30.89■■■□□ 2.54
RNF4-205ENST00000504224 LARP1Q6PKG0 1096 aaKnown RBP30.89■■■□□ 2.54
RNF4-205ENST00000504224 QRICH2Q9H0J4 1663 aa30.89■■■□□ 2.54
RNF4-205ENST00000504224 CPDO75976 1380 aa30.89■■■□□ 2.54
RNF4-205ENST00000504224 NEUROD1Q13562 356 aa30.88■■■□□ 2.53
RNF4-205ENST00000504224 FAM196AQ6ZSG2 479 aa30.88■■■□□ 2.53
RNF4-205ENST00000504224 CAMTA1Q9Y6Y1 1673 aa30.87■■■□□ 2.53
RNF4-205ENST00000504224 TRIM37O94972 964 aa30.86■■■□□ 2.53
RNF4-205ENST00000504224 PDE3BQ13370 1112 aa30.86■■■□□ 2.53
RNF4-205ENST00000504224 BARGINQ6ZT62 677 aa30.86■■■□□ 2.53
RNF4-205ENST00000504224 TCP11L2Q8N4U5 519 aa30.85■■■□□ 2.53
RNF4-205ENST00000504224 BRD4O60885 1362 aaPredicted RBP30.84■■■□□ 2.53
RNF4-205ENST00000504224 EVC2Q86UK5 1308 aa30.84■■■□□ 2.53
RNF4-205ENST00000504224 NLRP6P59044 892 aa30.84■■■□□ 2.53
RNF4-205ENST00000504224 USP6P35125 1406 aa30.82■■■□□ 2.52
RNF4-205ENST00000504224 EZH2Q15910 746 aaKnown RBP30.82■■■□□ 2.52
RNF4-205ENST00000504224 ROCK2O75116 1388 aaKnown RBP30.81■■■□□ 2.52
RNF4-205ENST00000504224 DISP2A7MBM2 1401 aa30.81■■■□□ 2.52
RNF4-205ENST00000504224 LMO7Q8WWI1 1683 aa30.81■■■□□ 2.52
RNF4-205ENST00000504224 TNS1Q9HBL0 1735 aaKnown RBP30.79■■■□□ 2.52
RNF4-205ENST00000504224 APBA3O96018 575 aa30.79■■■□□ 2.52
RNF4-205ENST00000504224 R3HDM1Q15032 1099 aaKnown RBP30.79■■■□□ 2.52
RNF4-205ENST00000504224 THRAP3Q9Y2W1 955 aaKnown RBP30.78■■■□□ 2.52
RNF4-205ENST00000504224 TRPM1Q7Z4N2 1603 aa30.77■■■□□ 2.52
RNF4-205ENST00000504224 COL5A2P05997 1499 aaPredicted RBP30.76■■■□□ 2.52
RNF4-205ENST00000504224 CAMKK2Q96RR4 588 aa30.75■■■□□ 2.51
RNF4-205ENST00000504224 LRP5O75197 1615 aa30.75■■■□□ 2.51
RNF4-205ENST00000504224 CRB1P82279 1406 aa30.72■■■□□ 2.51
RNF4-205ENST00000504224 AATKQ6ZMQ8 1374 aa30.71■■■□□ 2.51
RNF4-205ENST00000504224 SLIT3O75094 1523 aa30.71■■■□□ 2.51
RNF4-205ENST00000504224 ZNF692Q9BU19 519 aaPredicted RBP30.7■■■□□ 2.51
RNF4-205ENST00000504224 SOX12O15370 315 aa30.69■■■□□ 2.5
RNF4-205ENST00000504224 TOM1L2Q6ZVM7 507 aa30.69■■■□□ 2.5
RNF4-205ENST00000504224 TTC21BQ7Z4L5 1316 aa30.69■■■□□ 2.5
RNF4-205ENST00000504224 PARD3Q8TEW0 1356 aa30.67■■■□□ 2.5
RNF4-205ENST00000504224 PIK3C2AO00443 1686 aa30.67■■■□□ 2.5
RNF4-205ENST00000504224 KCNH5Q8NCM2 988 aa30.63■■■□□ 2.49
RNF4-205ENST00000504224 AXIN2Q9Y2T1 843 aa30.63■■■□□ 2.49
RNF4-205ENST00000504224 PARP4Q9UKK3 1724 aaKnown RBP30.62■■■□□ 2.49
RNF4-205ENST00000504224 TTC21AQ8NDW8 1320 aa30.62■■■□□ 2.49
RNF4-205ENST00000504224 KTN1Q86UP2 1357 aaKnown RBP30.62■■■□□ 2.49
RNF4-205ENST00000504224 C11orf95C9JLR9 678 aaPredicted RBP30.61■■■□□ 2.49
RNF4-205ENST00000504224 DDB1Q16531 1140 aa30.61■■■□□ 2.49
RNF4-205ENST00000504224 ARHGEF25Q86VW2 580 aa30.61■■■□□ 2.49
RNF4-205ENST00000504224 CPSF1Q10570 1443 aaKnown RBP30.61■■■□□ 2.49
RNF4-205ENST00000504224 CSB-PGBD3P0DP91 1061 aa30.6■■■□□ 2.49
RNF4-205ENST00000504224 NBPF14Q5TI25 921 aa30.6■■■□□ 2.49
RNF4-205ENST00000504224 WDR17Q8IZU2 1322 aa30.6■■■□□ 2.49
RNF4-205ENST00000504224 OVOS2A0A0G2JMS6 1433 aa30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms