RNA–Protein interactions for RNA: ENST00000504223.1

SH3TC1-208, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 3

Gene SH3TC1, Length 698 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-208ENST00000504223 PLEKHG3A1L390 1219 aa25.77■■□□□ 1.72
SH3TC1-208ENST00000504223 CABP2Q9NPB3 220 aa25.76■■□□□ 1.71
SH3TC1-208ENST00000504223 CRYBG1Q9Y4K1 1723 aa25.76■■□□□ 1.71
SH3TC1-208ENST00000504223 ACEP12821 1306 aa25.75■■□□□ 1.71
SH3TC1-208ENST00000504223 PCGF6Q9BYE7 350 aa25.75■■□□□ 1.71
SH3TC1-208ENST00000504223 PLCH1Q4KWH8 1693 aa25.74■■□□□ 1.71
SH3TC1-208ENST00000504223 SRPK2P78362 688 aaKnown RBP25.74■■□□□ 1.71
SH3TC1-208ENST00000504223 GJD4Q96KN9 370 aaPredicted RBP25.74■■□□□ 1.71
SH3TC1-208ENST00000504223 PAK3O75914 559 aaPredicted RBP25.73■■□□□ 1.71
SH3TC1-208ENST00000504223 NWD2Q9ULI1 1742 aa25.73■■□□□ 1.71
SH3TC1-208ENST00000504223 GLI3P10071 1580 aa25.73■■□□□ 1.71
SH3TC1-208ENST00000504223 PPIP5K1Q6PFW1 1433 aa25.72■■□□□ 1.71
SH3TC1-208ENST00000504223 FAM83GA6ND36 823 aa25.72■■□□□ 1.71
SH3TC1-208ENST00000504223 CARD11Q9BXL7 1154 aa25.69■■□□□ 1.7
SH3TC1-208ENST00000504223 VPS72Q15906 364 aa25.68■■□□□ 1.7
SH3TC1-208ENST00000504223 EVC2Q86UK5 1308 aa25.66■■□□□ 1.7
SH3TC1-208ENST00000504223 COL14A1Q05707 1796 aaKnown RBP25.66■■□□□ 1.7
SH3TC1-208ENST00000504223 PHRF1Q9P1Y6 1649 aaKnown RBP25.66■■□□□ 1.7
SH3TC1-208ENST00000504223 NRAPQ86VF7 1730 aa25.66■■□□□ 1.7
SH3TC1-208ENST00000504223 EP400Q96L91 3159 aa25.65■■□□□ 1.7
SH3TC1-208ENST00000504223 ATAD2Q6PL18 1390 aa25.65■■□□□ 1.7
SH3TC1-208ENST00000504223 CABP1Q9NZU7 370 aa25.64■■□□□ 1.7
SH3TC1-208ENST00000504223 SBNO2Q9Y2G9 1366 aa25.63■■□□□ 1.69
SH3TC1-208ENST00000504223 NUTM2GQ5VZR2 741 aa25.62■■□□□ 1.69
SH3TC1-208ENST00000504223 BTG4Q9NY30 223 aa25.62■■□□□ 1.69
SH3TC1-208ENST00000504223 BRD4O60885 1362 aaPredicted RBP25.61■■□□□ 1.69
SH3TC1-208ENST00000504223 USP6P35125 1406 aa25.61■■□□□ 1.69
SH3TC1-208ENST00000504223 KIAA0232Q92628 1395 aa25.6■■□□□ 1.69
SH3TC1-208ENST00000504223 NRKQ7Z2Y5 1582 aa25.6■■□□□ 1.69
SH3TC1-208ENST00000504223 ONECUT3O60422 494 aaPredicted RBP25.59■■□□□ 1.69
SH3TC1-208ENST00000504223 ABTB2Q8N961 1025 aa25.59■■□□□ 1.69
SH3TC1-208ENST00000504223 PRDM11Q9NQV5 511 aa25.59■■□□□ 1.69
SH3TC1-208ENST00000504223 USP19O94966 1318 aa25.59■■□□□ 1.69
SH3TC1-208ENST00000504223 AKAP12Q02952 1782 aa25.59■■□□□ 1.69
SH3TC1-208ENST00000504223 SSH2Q76I76 1423 aa25.58■■□□□ 1.69
SH3TC1-208ENST00000504223 CCDC9Q9Y3X0 531 aaKnown RBP25.56■■□□□ 1.68
SH3TC1-208ENST00000504223 CLSPNQ9HAW4 1339 aa25.56■■□□□ 1.68
SH3TC1-208ENST00000504223 SEPT12Q8IYM1 358 aa25.55■■□□□ 1.68
SH3TC1-208ENST00000504223 ZC3H6P61129 1189 aaKnown RBP25.54■■□□□ 1.68
SH3TC1-208ENST00000504223 PIK3C2AO00443 1686 aa25.53■■□□□ 1.68
SH3TC1-208ENST00000504223 CHRNA2Q15822 529 aa25.53■■□□□ 1.68
SH3TC1-208ENST00000504223 TESK2Q96S53 571 aa25.53■■□□□ 1.68
SH3TC1-208ENST00000504223 CPDO75976 1380 aa25.53■■□□□ 1.68
SH3TC1-208ENST00000504223 NLRP13Q86W25 1043 aa25.52■■□□□ 1.68
SH3TC1-208ENST00000504223 CPSF1Q10570 1443 aaKnown RBP25.52■■□□□ 1.68
SH3TC1-208ENST00000504223 SPATA31A5Q5VU36 1347 aa25.51■■□□□ 1.67
SH3TC1-208ENST00000504223 SPATA31A7Q8IWB4 1347 aa25.51■■□□□ 1.67
SH3TC1-208ENST00000504223 BRWD3Q6RI45 1802 aa25.51■■□□□ 1.67
SH3TC1-208ENST00000504223 ST20-MTHFSA0A0A6YYL1 179 aa25.5■■□□□ 1.67
SH3TC1-208ENST00000504223 MON2Q7Z3U7 1717 aa25.5■■□□□ 1.67
SH3TC1-208ENST00000504223 SLIT3O75094 1523 aa25.49■■□□□ 1.67
SH3TC1-208ENST00000504223 CD163L1Q9NR16 1453 aa25.49■■□□□ 1.67
SH3TC1-208ENST00000504223 GCP02774 474 aa25.49■■□□□ 1.67
SH3TC1-208ENST00000504223 ZNF692Q9BU19 519 aaPredicted RBP25.49■■□□□ 1.67
SH3TC1-208ENST00000504223 LMO7Q8WWI1 1683 aa25.48■■□□□ 1.67
SH3TC1-208ENST00000504223 FAM98CQ17RN3 349 aaKnown RBP25.48■■□□□ 1.67
SH3TC1-208ENST00000504223 CAMTA1Q9Y6Y1 1673 aa25.47■■□□□ 1.67
SH3TC1-208ENST00000504223 TTC21BQ7Z4L5 1316 aa25.46■■□□□ 1.67
SH3TC1-208ENST00000504223 NLRP6P59044 892 aa25.46■■□□□ 1.67
SH3TC1-208ENST00000504223 USP47Q96K76 1375 aa25.45■■□□□ 1.67
SH3TC1-208ENST00000504223 SPATA31A1Q5TZJ5 1347 aa25.45■■□□□ 1.66
SH3TC1-208ENST00000504223 TIMELESSQ9UNS1 1208 aa25.45■■□□□ 1.66
SH3TC1-208ENST00000504223 THSD7AQ9UPZ6 1657 aa25.45■■□□□ 1.66
SH3TC1-208ENST00000504223 KRT27Q7Z3Y8 459 aa25.44■■□□□ 1.66
SH3TC1-208ENST00000504223 CCDC125Q86Z20 511 aa25.44■■□□□ 1.66
SH3TC1-208ENST00000504223 KTN1Q86UP2 1357 aaKnown RBP25.44■■□□□ 1.66
SH3TC1-208ENST00000504223 STRN4Q9NRL3 753 aa25.43■■□□□ 1.66
SH3TC1-208ENST00000504223 CCER1Q8TC90 406 aaPredicted RBP25.42■■□□□ 1.66
SH3TC1-208ENST00000504223 SLC12A5Q9H2X9 1139 aa25.42■■□□□ 1.66
SH3TC1-208ENST00000504223 TTC21AQ8NDW8 1320 aa25.41■■□□□ 1.66
SH3TC1-208ENST00000504223 BLMP54132 1417 aaPredicted RBP25.41■■□□□ 1.66
SH3TC1-208ENST00000504223 PUS7Q96PZ0 661 aaKnown RBP25.41■■□□□ 1.66
SH3TC1-208ENST00000504223 A0A0G2JS52 829 aa25.4■■□□□ 1.66
SH3TC1-208ENST00000504223 MYT1Q01538 1121 aa25.4■■□□□ 1.66
SH3TC1-208ENST00000504223 COL5A2P05997 1499 aaPredicted RBP25.39■■□□□ 1.65
SH3TC1-208ENST00000504223 LARP1Q6PKG0 1096 aaKnown RBP25.38■■□□□ 1.65
SH3TC1-208ENST00000504223 TMC1Q8TDI8 760 aa25.38■■□□□ 1.65
SH3TC1-208ENST00000504223 AATKQ6ZMQ8 1374 aa25.38■■□□□ 1.65
SH3TC1-208ENST00000504223 EVA1CP58658 441 aa25.37■■□□□ 1.65
SH3TC1-208ENST00000504223 COL18A1P39060 1754 aa25.36■■□□□ 1.65
SH3TC1-208ENST00000504223 USP54Q70EL1 1684 aa25.36■■□□□ 1.65
SH3TC1-208ENST00000504223 A0A1W2PP64 1363 aa25.36■■□□□ 1.65
SH3TC1-208ENST00000504223 ZRANB1Q9UGI0 708 aa25.36■■□□□ 1.65
SH3TC1-208ENST00000504223 NFAT5O94916 1531 aa25.34■■□□□ 1.65
SH3TC1-208ENST00000504223 BARGINQ6ZT62 677 aa25.34■■□□□ 1.65
SH3TC1-208ENST00000504223 USP31Q70CQ4 1352 aa25.33■■□□□ 1.65
SH3TC1-208ENST00000504223 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.33■■□□□ 1.65
SH3TC1-208ENST00000504223 KCNH5Q8NCM2 988 aa25.33■■□□□ 1.65
SH3TC1-208ENST00000504223 USP35Q9P2H5 1018 aa25.33■■□□□ 1.65
SH3TC1-208ENST00000504223 SLC24A1O60721 1099 aa25.32■■□□□ 1.64
SH3TC1-208ENST00000504223 ARHGEF25Q86VW2 580 aa25.32■■□□□ 1.64
SH3TC1-208ENST00000504223 EDC4Q6P2E9 1401 aaKnown RBP25.31■■□□□ 1.64
SH3TC1-208ENST00000504223 ZBTB7CA1YPR0 619 aa25.31■■□□□ 1.64
SH3TC1-208ENST00000504223 HDGFL2Q7Z4V5 671 aaPredicted RBP25.31■■□□□ 1.64
SH3TC1-208ENST00000504223 NME9Q86XW9 330 aa25.31■■□□□ 1.64
SH3TC1-208ENST00000504223 TCP11L2Q8N4U5 519 aa25.31■■□□□ 1.64
SH3TC1-208ENST00000504223 NINLQ9Y2I6 1382 aa25.31■■□□□ 1.64
SH3TC1-208ENST00000504223 CRB1P82279 1406 aa25.3■■□□□ 1.64
SH3TC1-208ENST00000504223 TERF2IPQ9NYB0 399 aa25.3■■□□□ 1.64
SH3TC1-208ENST00000504223 AXIN2Q9Y2T1 843 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms