RNA–Protein interactions for RNA: ENST00000504208.5

KLHL3-204, Transcript of kelch like family member 3, humanhuman

TSL 2

Gene KLHL3, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-204ENST00000504208 RBM33Q96EV2 1170 aaKnown RBP12.58□□□□□ -0.4
KLHL3-204ENST00000504208 CDK19Q9BWU1 502 aa12.58□□□□□ -0.4
KLHL3-204ENST00000504208 KIF20BQ96Q89 1820 aa12.58□□□□□ -0.4
KLHL3-204ENST00000504208 KIF1AQ12756 1690 aa12.58□□□□□ -0.4
KLHL3-204ENST00000504208 DCCP43146 1447 aa12.57□□□□□ -0.4
KLHL3-204ENST00000504208 NCOA3Q9Y6Q9 1424 aa12.57□□□□□ -0.4
KLHL3-204ENST00000504208 A0A1W2PP64 1363 aa12.57□□□□□ -0.4
KLHL3-204ENST00000504208 NRKQ7Z2Y5 1582 aa12.57□□□□□ -0.4
KLHL3-204ENST00000504208 RRP1P56182 461 aaKnown RBP12.56□□□□□ -0.4
KLHL3-204ENST00000504208 C14orf37Q86TY3 774 aa12.56□□□□□ -0.4
KLHL3-204ENST00000504208 TRMT2AQ8IZ69 625 aaKnown RBP12.56□□□□□ -0.4
KLHL3-204ENST00000504208 WASLO00401 505 aaPredicted RBP12.56□□□□□ -0.4
KLHL3-204ENST00000504208 CD163L1Q9NR16 1453 aa12.55□□□□□ -0.4
KLHL3-204ENST00000504208 ANKARQ7Z5J8 1434 aa12.55□□□□□ -0.4
KLHL3-204ENST00000504208 IRX6P78412 446 aaPredicted RBP12.55□□□□□ -0.4
KLHL3-204ENST00000504208 RUNDC1Q96C34 613 aa12.55□□□□□ -0.4
KLHL3-204ENST00000504208 TSHZ2Q9NRE2 1034 aa12.55□□□□□ -0.4
KLHL3-204ENST00000504208 ANKRD26Q9UPS8 1709 aa12.55□□□□□ -0.4
KLHL3-204ENST00000504208 MSH6P52701 1360 aa12.54□□□□□ -0.4
KLHL3-204ENST00000504208 E9PSI1 815 aa12.54□□□□□ -0.4
KLHL3-204ENST00000504208 MTHFSP49914 203 aa12.54□□□□□ -0.4
KLHL3-204ENST00000504208 SLFN5Q08AF3 891 aa12.54□□□□□ -0.4
KLHL3-204ENST00000504208 CCDC27Q2M243 656 aa12.54□□□□□ -0.4
KLHL3-204ENST00000504208 PPIP5K1Q6PFW1 1433 aa12.54□□□□□ -0.4
KLHL3-204ENST00000504208 FYB1O15117 783 aa12.53□□□□□ -0.4
KLHL3-204ENST00000504208 DUSP27Q5VZP5 1158 aa12.53□□□□□ -0.4
KLHL3-204ENST00000504208 CDCA7LQ96GN5 454 aa12.53□□□□□ -0.4
KLHL3-204ENST00000504208 PRR36Q9H6K5 1346 aa12.53□□□□□ -0.4
KLHL3-204ENST00000504208 IQSEC2Q5JU85 1478 aa12.53□□□□□ -0.4
KLHL3-204ENST00000504208 PNNQ9H307 717 aaKnown RBP12.52□□□□□ -0.4
KLHL3-204ENST00000504208 SALL2Q9Y467 1007 aaPredicted RBP12.52□□□□□ -0.4
KLHL3-204ENST00000504208 MST1RQ04912 1400 aa12.52□□□□□ -0.41
KLHL3-204ENST00000504208 CPSF1Q10570 1443 aaKnown RBP12.52□□□□□ -0.41
KLHL3-204ENST00000504208 APAF1O14727 1248 aa12.52□□□□□ -0.41
KLHL3-204ENST00000504208 ZNF692Q9BU19 519 aaPredicted RBP12.52□□□□□ -0.41
KLHL3-204ENST00000504208 CABP1Q9NZU7 370 aa12.52□□□□□ -0.41
KLHL3-204ENST00000504208 NUTM2FA1L443 756 aa12.51□□□□□ -0.41
KLHL3-204ENST00000504208 WDR63Q8IWG1 891 aa12.51□□□□□ -0.41
KLHL3-204ENST00000504208 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.51□□□□□ -0.41
KLHL3-204ENST00000504208 CCDC61Q9Y6R9 512 aa12.51□□□□□ -0.41
KLHL3-204ENST00000504208 PNPLA6Q8IY17 1366 aa12.51□□□□□ -0.41
KLHL3-204ENST00000504208 EDC4Q6P2E9 1401 aaKnown RBP12.5□□□□□ -0.41
KLHL3-204ENST00000504208 NUDT16Q96DE0 195 aaKnown RBP12.5□□□□□ -0.41
KLHL3-204ENST00000504208 NHSL1Q5SYE7 1610 aa12.49□□□□□ -0.41
KLHL3-204ENST00000504208 TRPM3Q9HCF6 1732 aaPredicted RBP12.49□□□□□ -0.41
KLHL3-204ENST00000504208 C19orf44Q9H6X5 657 aa12.49□□□□□ -0.41
KLHL3-204ENST00000504208 C1orf167Q5SNV9 1468 aa12.49□□□□□ -0.41
KLHL3-204ENST00000504208 ROBO1Q9Y6N7 1651 aa12.49□□□□□ -0.41
KLHL3-204ENST00000504208 ATF3P18847 181 aa12.48□□□□□ -0.41
KLHL3-204ENST00000504208 CCDC136Q96JN2 1154 aa12.48□□□□□ -0.41
KLHL3-204ENST00000504208 SHPRHQ149N8 1683 aa12.48□□□□□ -0.41
KLHL3-204ENST00000504208 WWC1Q8IX03 1113 aa12.47□□□□□ -0.41
KLHL3-204ENST00000504208 MARF1Q9Y4F3 1742 aaKnown RBP12.47□□□□□ -0.41
KLHL3-204ENST00000504208 AATKQ6ZMQ8 1374 aa12.47□□□□□ -0.41
KLHL3-204ENST00000504208 CCDC146Q8IYE0 955 aa12.47□□□□□ -0.41
KLHL3-204ENST00000504208 GGNBP2Q9H3C7 697 aa12.47□□□□□ -0.41
KLHL3-204ENST00000504208 PIK3C2AO00443 1686 aa12.47□□□□□ -0.41
KLHL3-204ENST00000504208 USP54Q70EL1 1684 aa12.47□□□□□ -0.41
KLHL3-204ENST00000504208 PLEKHG3A1L390 1219 aa12.46□□□□□ -0.42
KLHL3-204ENST00000504208 TNNT2P45379 298 aaPredicted RBP12.46□□□□□ -0.42
KLHL3-204ENST00000504208 B4GALNT3Q6L9W6 998 aa12.46□□□□□ -0.42
KLHL3-204ENST00000504208 CADPS2Q86UW7 1296 aa12.46□□□□□ -0.42
KLHL3-204ENST00000504208 TCP11L2Q8N4U5 519 aa12.46□□□□□ -0.42
KLHL3-204ENST00000504208 COL3A1P02461 1466 aaPredicted RBP12.45□□□□□ -0.42
KLHL3-204ENST00000504208 ALS2Q96Q42 1657 aa12.45□□□□□ -0.42
KLHL3-204ENST00000504208 SENP3-EIF4A1A0A087X0R7 540 aa12.44□□□□□ -0.42
KLHL3-204ENST00000504208 DIAPH1O60610 1272 aaKnown RBP12.44□□□□□ -0.42
KLHL3-204ENST00000504208 CT47B1P0C2W7 299 aaPredicted RBP12.44□□□□□ -0.42
KLHL3-204ENST00000504208 USP6P35125 1406 aa12.44□□□□□ -0.42
KLHL3-204ENST00000504208 FCHSD2O94868 740 aa12.43□□□□□ -0.42
KLHL3-204ENST00000504208 U2AF1L5P0DN76 240 aaPredicted RBP12.43□□□□□ -0.42
KLHL3-204ENST00000504208 U2AF1Q01081 240 aaKnown RBP eCLIP12.43□□□□□ -0.42
KLHL3-204ENST00000504208 PMFBP1Q8TBY8 1022 aa12.43□□□□□ -0.42
KLHL3-204ENST00000504208 PLEKHF1Q96S99 279 aa12.43□□□□□ -0.42
KLHL3-204ENST00000504208 PHF8Q9UPP1 1060 aa12.43□□□□□ -0.42
KLHL3-204ENST00000504208 ACEP12821 1306 aa12.42□□□□□ -0.42
KLHL3-204ENST00000504208 IL16Q14005 1332 aa12.42□□□□□ -0.42
KLHL3-204ENST00000504208 AAMPQ13685 434 aa12.42□□□□□ -0.42
KLHL3-204ENST00000504208 ESCO1Q5FWF5 840 aa12.42□□□□□ -0.42
KLHL3-204ENST00000504208 MYH16Q9H6N6 1097 aa12.42□□□□□ -0.42
KLHL3-204ENST00000504208 PHLPP1O60346 1717 aa12.42□□□□□ -0.42
KLHL3-204ENST00000504208 AHDC1Q5TGY3 1603 aaPredicted RBP12.41□□□□□ -0.42
KLHL3-204ENST00000504208 EXOC6Q8TAG9 804 aa12.41□□□□□ -0.42
KLHL3-204ENST00000504208 ORAI2Q96SN7 254 aa12.41□□□□□ -0.42
KLHL3-204ENST00000504208 POLKQ9UBT6 870 aa12.41□□□□□ -0.42
KLHL3-204ENST00000504208 ABCA3Q99758 1704 aa12.41□□□□□ -0.42
KLHL3-204ENST00000504208 CRYBG1Q9Y4K1 1723 aa12.41□□□□□ -0.42
KLHL3-204ENST00000504208 NGDNQ8NEJ9 315 aaKnown RBP12.4□□□□□ -0.42
KLHL3-204ENST00000504208 COG3Q96JB2 828 aa12.4□□□□□ -0.42
KLHL3-204ENST00000504208 PXDNQ92626 1479 aa12.4□□□□□ -0.42
KLHL3-204ENST00000504208 PHRF1Q9P1Y6 1649 aaKnown RBP12.4□□□□□ -0.42
KLHL3-204ENST00000504208 PDE3AQ14432 1141 aa12.39□□□□□ -0.43
KLHL3-204ENST00000504208 SPINK5Q9NQ38 1064 aaPredicted RBP12.39□□□□□ -0.43
KLHL3-204ENST00000504208 RBM19Q9Y4C8 960 aaKnown RBP12.39□□□□□ -0.43
KLHL3-204ENST00000504208 MAPK8IP3Q9UPT6 1336 aa12.39□□□□□ -0.43
KLHL3-204ENST00000504208 LTN1O94822 1766 aa12.39□□□□□ -0.43
KLHL3-204ENST00000504208 NEFMP07197 916 aa12.39□□□□□ -0.43
KLHL3-204ENST00000504208 SSH2Q76I76 1423 aa12.39□□□□□ -0.43
KLHL3-204ENST00000504208 CDK12Q9NYV4 1490 aaPredicted RBP12.39□□□□□ -0.43
KLHL3-204ENST00000504208 MAP2P11137 1827 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms