RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 NUTM2DQ5VT03 806 aaPredicted RBP9.88□□□□□ -0.83
SUB1-204ENST00000504016 MYSM1Q5VVJ2 828 aa9.88□□□□□ -0.83
SUB1-204ENST00000504016 NUTM2AQ8IVF1 878 aaPredicted RBP9.88□□□□□ -0.83
SUB1-204ENST00000504016 TSC1Q92574 1164 aa9.88□□□□□ -0.83
SUB1-204ENST00000504016 SENP2Q9HC62 589 aa9.88□□□□□ -0.83
SUB1-204ENST00000504016 VARSP26640 1264 aaKnown RBP9.87□□□□□ -0.83
SUB1-204ENST00000504016 TREML4Q6UXN2 200 aa9.87□□□□□ -0.83
SUB1-204ENST00000504016 LIMD1Q9UGP4 676 aa9.87□□□□□ -0.83
SUB1-204ENST00000504016 MAP10Q9P2G4 905 aa9.86□□□□□ -0.83
SUB1-204ENST00000504016 PLEKHG3A1L390 1219 aa9.85□□□□□ -0.83
SUB1-204ENST00000504016 SNRPBP14678 240 aaKnown RBP9.85□□□□□ -0.83
SUB1-204ENST00000504016 QPCTQ16769 361 aa9.85□□□□□ -0.83
SUB1-204ENST00000504016 TRIM47Q96LD4 638 aa9.85□□□□□ -0.83
SUB1-204ENST00000504016 TLL2Q9Y6L7 1015 aa9.85□□□□□ -0.83
SUB1-204ENST00000504016 CAPN5O15484 640 aaPredicted RBP9.84□□□□□ -0.83
SUB1-204ENST00000504016 KIFC2Q96AC6 838 aa9.84□□□□□ -0.83
SUB1-204ENST00000504016 F12P00748 615 aaPredicted RBP9.83□□□□□ -0.84
SUB1-204ENST00000504016 TUSC1Q2TAM9 212 aa9.83□□□□□ -0.84
SUB1-204ENST00000504016 PER1O15534 1290 aaPredicted RBP9.82□□□□□ -0.84
SUB1-204ENST00000504016 LILRB3O75022 631 aa9.82□□□□□ -0.84
SUB1-204ENST00000504016 WFS1O76024 890 aa9.82□□□□□ -0.84
SUB1-204ENST00000504016 RSPH6AQ9H0K4 717 aa9.82□□□□□ -0.84
SUB1-204ENST00000504016 CLK2P49760 499 aaKnown RBP9.81□□□□□ -0.84
SUB1-204ENST00000504016 AGERQ15109 404 aa9.81□□□□□ -0.84
SUB1-204ENST00000504016 MPNDQ8N594 471 aa9.81□□□□□ -0.84
SUB1-204ENST00000504016 FAM174AQ8TBP5 190 aa9.81□□□□□ -0.84
SUB1-204ENST00000504016 FOXJ1Q92949 421 aa9.81□□□□□ -0.84
SUB1-204ENST00000504016 POLR3EQ9NVU0 708 aa9.81□□□□□ -0.84
SUB1-204ENST00000504016 HELBQ8NG08 1087 aaPredicted RBP9.8□□□□□ -0.84
SUB1-204ENST00000504016 BCANQ96GW7 911 aa9.8□□□□□ -0.84
SUB1-204ENST00000504016 BMP1P13497 986 aa9.79□□□□□ -0.84
SUB1-204ENST00000504016 NNTQ13423 1086 aa9.79□□□□□ -0.84
SUB1-204ENST00000504016 ARID5BQ14865 1188 aa9.79□□□□□ -0.84
SUB1-204ENST00000504016 RTL5Q5HYW3 569 aaPredicted RBP9.79□□□□□ -0.84
SUB1-204ENST00000504016 LCE2AQ5TA79 106 aaPredicted RBP9.79□□□□□ -0.84
SUB1-204ENST00000504016 NFX1Q12986 1120 aaKnown RBP9.77□□□□□ -0.85
SUB1-204ENST00000504016 TRIM46Q7Z4K8 759 aa9.77□□□□□ -0.85
SUB1-204ENST00000504016 BPHLQ86WA6 291 aaPredicted RBP9.77□□□□□ -0.85
SUB1-204ENST00000504016 ARMC2Q8NEN0 867 aa9.76□□□□□ -0.85
SUB1-204ENST00000504016 TERTO14746 1132 aaKnown RBP9.75□□□□□ -0.85
SUB1-204ENST00000504016 ADH1CP00326 375 aa9.75□□□□□ -0.85
SUB1-204ENST00000504016 ATP1B4Q9UN42 357 aaPredicted RBP9.75□□□□□ -0.85
SUB1-204ENST00000504016 WDR4P57081 412 aaKnown RBP9.74□□□□□ -0.85
SUB1-204ENST00000504016 CDK15Q96Q40 435 aa9.74□□□□□ -0.85
SUB1-204ENST00000504016 C4orf48Q5BLP8 95 aa9.73□□□□□ -0.85
SUB1-204ENST00000504016 TIMP2P16035 220 aa9.72□□□□□ -0.85
SUB1-204ENST00000504016 NBPF14Q5TI25 921 aa9.72□□□□□ -0.85
SUB1-204ENST00000504016 ZFP42Q96MM3 310 aa9.72□□□□□ -0.85
SUB1-204ENST00000504016 GPBP1L1Q9HC44 474 aaPredicted RBP9.72□□□□□ -0.85
SUB1-204ENST00000504016 SCARF1Q14162 830 aa9.71□□□□□ -0.86
SUB1-204ENST00000504016 SKIV2LQ15477 1246 aaKnown RBP9.71□□□□□ -0.86
SUB1-204ENST00000504016 KDM4CQ9H3R0 1056 aa9.71□□□□□ -0.86
SUB1-204ENST00000504016 CTDSPL2Q05D32 466 aa9.7□□□□□ -0.86
SUB1-204ENST00000504016 NR5A1Q13285 461 aa9.7□□□□□ -0.86
SUB1-204ENST00000504016 MRPL14Q6P1L8 145 aaKnown RBP9.7□□□□□ -0.86
SUB1-204ENST00000504016 DDRGK1Q96HY6 314 aa9.7□□□□□ -0.86
SUB1-204ENST00000504016 MAGEB6P1A0A0J9YX57 407 aa9.69□□□□□ -0.86
SUB1-204ENST00000504016 ZIC2O95409 532 aaPredicted RBP9.69□□□□□ -0.86
SUB1-204ENST00000504016 SLC16A10Q8TF71 515 aa9.69□□□□□ -0.86
SUB1-204ENST00000504016 KLF16Q9BXK1 252 aaPredicted RBP9.69□□□□□ -0.86
SUB1-204ENST00000504016 FAM117AQ9C073 453 aa9.69□□□□□ -0.86
SUB1-204ENST00000504016 NXF1Q9UBU9 619 aaKnown RBP9.69□□□□□ -0.86
SUB1-204ENST00000504016 GRM5P41594 1212 aa9.68□□□□□ -0.86
SUB1-204ENST00000504016 SH3D19Q5HYK7 790 aa9.68□□□□□ -0.86
SUB1-204ENST00000504016 PURBQ96QR8 312 aaKnown RBP9.68□□□□□ -0.86
SUB1-204ENST00000504016 NR3C2P08235 984 aa9.67□□□□□ -0.86
SUB1-204ENST00000504016 SH3BP5LQ7L8J4 393 aa9.67□□□□□ -0.86
SUB1-204ENST00000504016 SH3RF1Q7Z6J0 888 aa9.67□□□□□ -0.86
SUB1-204ENST00000504016 PROCA1Q8NCQ7 364 aaPredicted RBP9.67□□□□□ -0.86
SUB1-204ENST00000504016 ITPKCQ96DU7 683 aa9.67□□□□□ -0.86
SUB1-204ENST00000504016 CARD14Q9BXL6 1004 aa9.67□□□□□ -0.86
SUB1-204ENST00000504016 ZFAND3Q9H8U3 227 aa9.67□□□□□ -0.86
SUB1-204ENST00000504016 WIPF1O43516 503 aa9.66□□□□□ -0.86
SUB1-204ENST00000504016 VASH1Q7L8A9 365 aaPredicted RBP9.66□□□□□ -0.86
SUB1-204ENST00000504016 GPKOWQ92917 476 aaPredicted RBP eCLIP9.66□□□□□ -0.86
SUB1-204ENST00000504016 C1QTNF2Q9BXJ5 285 aa9.66□□□□□ -0.86
SUB1-204ENST00000504016 LRRN4Q8WUT4 740 aa9.65□□□□□ -0.86
SUB1-204ENST00000504016 FSHRP23945 695 aa9.64□□□□□ -0.87
SUB1-204ENST00000504016 INSM1Q01101 510 aaPredicted RBP9.64□□□□□ -0.87
SUB1-204ENST00000504016 LCE2CQ5TA81 110 aa9.64□□□□□ -0.87
SUB1-204ENST00000504016 MAP4K5Q9Y4K4 846 aa9.64□□□□□ -0.87
SUB1-204ENST00000504016 C6orf118Q5T5N4 469 aa9.63□□□□□ -0.87
SUB1-204ENST00000504016 NPAS3Q8IXF0 933 aa9.63□□□□□ -0.87
SUB1-204ENST00000504016 TRMT44Q8IYL2 757 aaKnown RBP9.63□□□□□ -0.87
SUB1-204ENST00000504016 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.63□□□□□ -0.87
SUB1-204ENST00000504016 AP1G2O75843 785 aa9.62□□□□□ -0.87
SUB1-204ENST00000504016 UPP2O95045 317 aa9.62□□□□□ -0.87
SUB1-204ENST00000504016 VEGFBP49765 207 aa9.62□□□□□ -0.87
SUB1-204ENST00000504016 NR6A1Q15406 480 aa9.62□□□□□ -0.87
SUB1-204ENST00000504016 FBXO31Q5XUX0 539 aaPredicted RBP9.62□□□□□ -0.87
SUB1-204ENST00000504016 PPP2R2DQ66LE6 453 aa9.62□□□□□ -0.87
SUB1-204ENST00000504016 FKBPLQ9UIM3 349 aa9.62□□□□□ -0.87
SUB1-204ENST00000504016 ERFEQ4G0M1 354 aa9.61□□□□□ -0.87
SUB1-204ENST00000504016 PDXDC2PQ6P474 469 aa9.61□□□□□ -0.87
SUB1-204ENST00000504016 ARHGAP9Q9BRR9 750 aa9.61□□□□□ -0.87
SUB1-204ENST00000504016 SOBPA7XYQ1 873 aa9.6□□□□□ -0.87
SUB1-204ENST00000504016 CCDC116Q8IYX3 515 aa9.6□□□□□ -0.87
SUB1-204ENST00000504016 IRF7Q92985 503 aa9.6□□□□□ -0.87
SUB1-204ENST00000504016 EMILIN1Q9Y6C2 1016 aa9.6□□□□□ -0.87
SUB1-204ENST00000504016 MAN1A2O60476 641 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms