RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 ZNF428Q96B54 188 aa18.99■□□□□ 0.63
SNF8-203ENST00000504000 CABP2Q9NPB3 220 aa18.99■□□□□ 0.63
SNF8-203ENST00000504000 SMC4Q9NTJ3 1288 aa18.99■□□□□ 0.63
SNF8-203ENST00000504000 CDC42BPGQ6DT37 1551 aa18.98■□□□□ 0.63
SNF8-203ENST00000504000 PTPRMP28827 1452 aa18.98■□□□□ 0.63
SNF8-203ENST00000504000 EXOSC9Q06265 439 aaKnown RBP18.98■□□□□ 0.63
SNF8-203ENST00000504000 KIF16BQ96L93 1317 aa18.98■□□□□ 0.63
SNF8-203ENST00000504000 BRPF1P55201 1214 aaPredicted RBP18.97■□□□□ 0.63
SNF8-203ENST00000504000 ALDH1L2Q3SY69 923 aa18.97■□□□□ 0.63
SNF8-203ENST00000504000 DIP2CQ9Y2E4 1556 aa18.97■□□□□ 0.63
SNF8-203ENST00000504000 IPO8O15397 1037 aaKnown RBP18.97■□□□□ 0.63
SNF8-203ENST00000504000 SSH1Q8WYL5 1049 aa18.97■□□□□ 0.63
SNF8-203ENST00000504000 CD163L1Q9NR16 1453 aa18.96■□□□□ 0.63
SNF8-203ENST00000504000 L1TD1Q5T7N2 865 aaKnown RBP18.96■□□□□ 0.63
SNF8-203ENST00000504000 FAM43AQ8N2R8 423 aa18.96■□□□□ 0.63
SNF8-203ENST00000504000 RTN4Q9NQC3 1192 aaKnown RBP18.96■□□□□ 0.63
SNF8-203ENST00000504000 FYB1O15117 783 aa18.95■□□□□ 0.62
SNF8-203ENST00000504000 PPIP5K1Q6PFW1 1433 aa18.95■□□□□ 0.62
SNF8-203ENST00000504000 TSR2Q969E8 191 aaKnown RBP18.94■□□□□ 0.62
SNF8-203ENST00000504000 SLKQ9H2G2 1235 aaPredicted RBP18.94■□□□□ 0.62
SNF8-203ENST00000504000 ZBTB40Q9NUA8 1239 aa18.94■□□□□ 0.62
SNF8-203ENST00000504000 IDI1Q13907 227 aa18.94■□□□□ 0.62
SNF8-203ENST00000504000 C22orf23Q9BZE7 217 aa18.94■□□□□ 0.62
SNF8-203ENST00000504000 TMEM131LA2VDJ0 1609 aa18.93■□□□□ 0.62
SNF8-203ENST00000504000 U2SURPO15042 1029 aaKnown RBP18.92■□□□□ 0.62
SNF8-203ENST00000504000 FCHSD2O94868 740 aa18.92■□□□□ 0.62
SNF8-203ENST00000504000 SRPK2P78362 688 aaKnown RBP18.92■□□□□ 0.62
SNF8-203ENST00000504000 POGKQ9P215 609 aa18.92■□□□□ 0.62
SNF8-203ENST00000504000 DIAPH1O60610 1272 aaKnown RBP18.92■□□□□ 0.62
SNF8-203ENST00000504000 CHMP4BQ9H444 224 aaKnown RBP18.92■□□□□ 0.62
SNF8-203ENST00000504000 GGNBP2Q9H3C7 697 aa18.91■□□□□ 0.62
SNF8-203ENST00000504000 CHMP5Q9NZZ3 219 aa18.91■□□□□ 0.62
SNF8-203ENST00000504000 NOB1Q9ULX3 412 aaKnown RBP18.91■□□□□ 0.62
SNF8-203ENST00000504000 YTHDC2Q9H6S0 1430 aaKnown RBP18.91■□□□□ 0.62
SNF8-203ENST00000504000 RIPK4P57078 832 aa18.9■□□□□ 0.62
SNF8-203ENST00000504000 ITPRIPQ8IWB1 547 aa18.9■□□□□ 0.62
SNF8-203ENST00000504000 ARHGEF40Q8TER5 1519 aa18.89■□□□□ 0.61
SNF8-203ENST00000504000 NUCB1Q02818 461 aa18.89■□□□□ 0.61
SNF8-203ENST00000504000 HDGFL2Q7Z4V5 671 aaPredicted RBP18.89■□□□□ 0.61
SNF8-203ENST00000504000 RBM25P49756 843 aaKnown RBP18.88■□□□□ 0.61
SNF8-203ENST00000504000 TMEM57Q8N5G2 664 aa18.88■□□□□ 0.61
SNF8-203ENST00000504000 ANO8Q9HCE9 1232 aaPredicted RBP18.88■□□□□ 0.61
SNF8-203ENST00000504000 PREX1Q8TCU6 1659 aa18.88■□□□□ 0.61
SNF8-203ENST00000504000 MCM4P33991 863 aa18.88■□□□□ 0.61
SNF8-203ENST00000504000 ARHGAP45Q92619 1136 aa18.88■□□□□ 0.61
SNF8-203ENST00000504000 KIF20BQ96Q89 1820 aa18.87■□□□□ 0.61
SNF8-203ENST00000504000 NCOA3Q9Y6Q9 1424 aa18.87■□□□□ 0.61
SNF8-203ENST00000504000 RICTORQ6R327 1708 aa18.87■□□□□ 0.61
SNF8-203ENST00000504000 SNX21Q969T3 373 aa18.87■□□□□ 0.61
SNF8-203ENST00000504000 FAM135BQ49AJ0 1406 aa18.87■□□□□ 0.61
SNF8-203ENST00000504000 PIK3R4Q99570 1358 aa18.87■□□□□ 0.61
SNF8-203ENST00000504000 DLC1Q96QB1 1528 aa18.86■□□□□ 0.61
SNF8-203ENST00000504000 CALD1Q05682 793 aaKnown RBP18.86■□□□□ 0.61
SNF8-203ENST00000504000 NUTM2DQ5VT03 806 aaPredicted RBP18.86■□□□□ 0.61
SNF8-203ENST00000504000 ATP7BP35670 1465 aa18.85■□□□□ 0.61
SNF8-203ENST00000504000 FSD2A1L4K1 749 aa18.85■□□□□ 0.61
SNF8-203ENST00000504000 PRAM1Q96QH2 718 aa18.85■□□□□ 0.61
SNF8-203ENST00000504000 MFAP1P55081 439 aaKnown RBP18.84■□□□□ 0.61
SNF8-203ENST00000504000 ALKQ9UM73 1620 aa18.84■□□□□ 0.61
SNF8-203ENST00000504000 REREQ9P2R6 1566 aa18.84■□□□□ 0.61
SNF8-203ENST00000504000 BMP2KLQ5H9B9 411 aa18.84■□□□□ 0.61
SNF8-203ENST00000504000 GCC1Q96CN9 775 aa18.84■□□□□ 0.61
SNF8-203ENST00000504000 LRRC7Q96NW7 1537 aa18.84■□□□□ 0.61
SNF8-203ENST00000504000 MYO5BQ9ULV0 1848 aa18.83■□□□□ 0.61
SNF8-203ENST00000504000 RAPGEF3O95398 923 aa18.83■□□□□ 0.6
SNF8-203ENST00000504000 DDIT3P35638 169 aa18.83■□□□□ 0.6
SNF8-203ENST00000504000 SAFB2Q14151 953 aaKnown RBP eCLIP18.83■□□□□ 0.6
SNF8-203ENST00000504000 HSCBQ8IWL3 235 aa18.83■□□□□ 0.6
SNF8-203ENST00000504000 RSPH6AQ9H0K4 717 aa18.83■□□□□ 0.6
SNF8-203ENST00000504000 STK26Q9P289 416 aa18.83■□□□□ 0.6
SNF8-203ENST00000504000 ISY1Q9ULR0 285 aaKnown RBP18.83■□□□□ 0.6
SNF8-203ENST00000504000 PTCH1Q13635 1447 aa18.82■□□□□ 0.6
SNF8-203ENST00000504000 CHD1LQ86WJ1 897 aa18.82■□□□□ 0.6
SNF8-203ENST00000504000 ZNF692Q9BU19 519 aaPredicted RBP18.82■□□□□ 0.6
SNF8-203ENST00000504000 CIZ1Q9ULV3 898 aaPredicted RBP18.82■□□□□ 0.6
SNF8-203ENST00000504000 MINK1Q8N4C8 1332 aaPredicted RBP18.81■□□□□ 0.6
SNF8-203ENST00000504000 CDK19Q9BWU1 502 aa18.81■□□□□ 0.6
SNF8-203ENST00000504000 DDX11L8A8MPP1 907 aa18.8■□□□□ 0.6
SNF8-203ENST00000504000 EIF5BO60841 1220 aaKnown RBP18.8■□□□□ 0.6
SNF8-203ENST00000504000 GOLGA6L3A6NEY3 463 aa18.8■□□□□ 0.6
SNF8-203ENST00000504000 ZBTB7BO15156 539 aaPredicted RBP18.8■□□□□ 0.6
SNF8-203ENST00000504000 NFE2L2Q16236 605 aa18.8■□□□□ 0.6
SNF8-203ENST00000504000 OSCARQ8IYS5 282 aa18.79■□□□□ 0.6
SNF8-203ENST00000504000 IFT57Q9NWB7 429 aa18.78■□□□□ 0.6
SNF8-203ENST00000504000 CABP1Q9NZU7 370 aa18.78■□□□□ 0.6
SNF8-203ENST00000504000 POLKQ9UBT6 870 aa18.78■□□□□ 0.6
SNF8-203ENST00000504000 KIF24Q5T7B8 1368 aa18.78■□□□□ 0.6
SNF8-203ENST00000504000 VAMP4O75379 141 aa18.77■□□□□ 0.6
SNF8-203ENST00000504000 GNAI1P63096 354 aa18.77■□□□□ 0.6
SNF8-203ENST00000504000 TRAK2O60296 914 aa18.77■□□□□ 0.6
SNF8-203ENST00000504000 ZNF853P0CG23 659 aa18.77■□□□□ 0.6
SNF8-203ENST00000504000 MRPL50Q8N5N7 158 aaKnown RBP18.77■□□□□ 0.6
SNF8-203ENST00000504000 PPP6R1Q9UPN7 881 aa18.77■□□□□ 0.6
SNF8-203ENST00000504000 AATKQ6ZMQ8 1374 aa18.77■□□□□ 0.59
SNF8-203ENST00000504000 PTMSP20962 102 aa18.76■□□□□ 0.59
SNF8-203ENST00000504000 PRKAR2BP31323 418 aa18.76■□□□□ 0.59
SNF8-203ENST00000504000 YEATS2Q9ULM3 1422 aa18.76■□□□□ 0.59
SNF8-203ENST00000504000 CFAP44Q96MT7 982 aa18.75■□□□□ 0.59
SNF8-203ENST00000504000 ABCC4O15439 1325 aa18.75■□□□□ 0.59
SNF8-203ENST00000504000 CDK12Q9NYV4 1490 aaPredicted RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms