RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 MSH6P52701 1360 aa12.66□□□□□ -0.38
PDLIM5-207ENST00000503974 USP32Q8NFA0 1604 aa12.66□□□□□ -0.38
PDLIM5-207ENST00000503974 FTSJ3Q8IY81 847 aaKnown RBP12.66□□□□□ -0.38
PDLIM5-207ENST00000503974 RBM33Q96EV2 1170 aaKnown RBP12.66□□□□□ -0.38
PDLIM5-207ENST00000503974 TOPAZ1Q8N9V7 1692 aa12.65□□□□□ -0.38
PDLIM5-207ENST00000503974 SAFB2Q14151 953 aaKnown RBP eCLIP12.65□□□□□ -0.38
PDLIM5-207ENST00000503974 MINK1Q8N4C8 1332 aaPredicted RBP12.65□□□□□ -0.38
PDLIM5-207ENST00000503974 ANKARQ7Z5J8 1434 aa12.64□□□□□ -0.39
PDLIM5-207ENST00000503974 ATP7BP35670 1465 aa12.64□□□□□ -0.39
PDLIM5-207ENST00000503974 MST1RQ04912 1400 aa12.63□□□□□ -0.39
PDLIM5-207ENST00000503974 WASLO00401 505 aaPredicted RBP12.63□□□□□ -0.39
PDLIM5-207ENST00000503974 ZBTB47Q9UFB7 747 aaPredicted RBP12.63□□□□□ -0.39
PDLIM5-207ENST00000503974 GSE1Q14687 1217 aa12.63□□□□□ -0.39
PDLIM5-207ENST00000503974 CERKQ8TCT0 537 aa12.63□□□□□ -0.39
PDLIM5-207ENST00000503974 SECISBP2LQ93073 1101 aaKnown RBP12.63□□□□□ -0.39
PDLIM5-207ENST00000503974 PUS7Q96PZ0 661 aaKnown RBP12.63□□□□□ -0.39
PDLIM5-207ENST00000503974 DISP3Q9P2K9 1392 aa12.63□□□□□ -0.39
PDLIM5-207ENST00000503974 ITSN1Q15811 1721 aa12.63□□□□□ -0.39
PDLIM5-207ENST00000503974 EVC2Q86UK5 1308 aa12.62□□□□□ -0.39
PDLIM5-207ENST00000503974 CNGB1Q14028 1251 aaPredicted RBP12.61□□□□□ -0.39
PDLIM5-207ENST00000503974 CADPS2Q86UW7 1296 aa12.61□□□□□ -0.39
PDLIM5-207ENST00000503974 HIRIP3Q9BW71 556 aaPredicted RBP12.61□□□□□ -0.39
PDLIM5-207ENST00000503974 RGPD8O14715 1765 aaPredicted RBP12.61□□□□□ -0.39
PDLIM5-207ENST00000503974 C1orf167Q5SNV9 1468 aa12.6□□□□□ -0.39
PDLIM5-207ENST00000503974 MYOM1P52179 1685 aa12.6□□□□□ -0.39
PDLIM5-207ENST00000503974 TMF1P82094 1093 aa12.6□□□□□ -0.39
PDLIM5-207ENST00000503974 CDK19Q9BWU1 502 aa12.6□□□□□ -0.39
PDLIM5-207ENST00000503974 PRR36Q9H6K5 1346 aa12.59□□□□□ -0.39
PDLIM5-207ENST00000503974 KIF1AQ12756 1690 aa12.59□□□□□ -0.39
PDLIM5-207ENST00000503974 HSP90B1P14625 803 aaKnown RBP12.59□□□□□ -0.39
PDLIM5-207ENST00000503974 ATAD2Q6PL18 1390 aa12.59□□□□□ -0.39
PDLIM5-207ENST00000503974 ATF3P18847 181 aa12.58□□□□□ -0.39
PDLIM5-207ENST00000503974 PPM1GO15355 546 aaPredicted RBP12.58□□□□□ -0.4
PDLIM5-207ENST00000503974 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.58□□□□□ -0.4
PDLIM5-207ENST00000503974 IRX6P78412 446 aaPredicted RBP12.57□□□□□ -0.4
PDLIM5-207ENST00000503974 CDCA8Q53HL2 280 aa12.57□□□□□ -0.4
PDLIM5-207ENST00000503974 CABP2Q9NPB3 220 aa12.57□□□□□ -0.4
PDLIM5-207ENST00000503974 PDCL3Q9H2J4 239 aa12.56□□□□□ -0.4
PDLIM5-207ENST00000503974 ROBO1Q9Y6N7 1651 aa12.56□□□□□ -0.4
PDLIM5-207ENST00000503974 NINLQ9Y2I6 1382 aa12.56□□□□□ -0.4
PDLIM5-207ENST00000503974 NHSL1Q5SYE7 1610 aa12.55□□□□□ -0.4
PDLIM5-207ENST00000503974 SRPK2P78362 688 aaKnown RBP12.55□□□□□ -0.4
PDLIM5-207ENST00000503974 AMER1Q5JTC6 1135 aaPredicted RBP12.55□□□□□ -0.4
PDLIM5-207ENST00000503974 NUDT16Q96DE0 195 aaKnown RBP12.55□□□□□ -0.4
PDLIM5-207ENST00000503974 AKAP12Q02952 1782 aa12.55□□□□□ -0.4
PDLIM5-207ENST00000503974 ANP32AP39687 249 aaKnown RBP12.55□□□□□ -0.4
PDLIM5-207ENST00000503974 SLAIN2Q9P270 581 aa12.55□□□□□ -0.4
PDLIM5-207ENST00000503974 FBXO3Q9UK99 471 aa12.55□□□□□ -0.4
PDLIM5-207ENST00000503974 CCDC61Q9Y6R9 512 aa12.55□□□□□ -0.4
PDLIM5-207ENST00000503974 KIF7Q2M1P5 1343 aa12.55□□□□□ -0.4
PDLIM5-207ENST00000503974 CCDC7Q96M83 1385 aa12.55□□□□□ -0.4
PDLIM5-207ENST00000503974 TOM1O60784 492 aa12.54□□□□□ -0.4
PDLIM5-207ENST00000503974 PPIP5K1Q6PFW1 1433 aa12.54□□□□□ -0.4
PDLIM5-207ENST00000503974 POLR3AO14802 1390 aaPredicted RBP12.53□□□□□ -0.4
PDLIM5-207ENST00000503974 AHDC1Q5TGY3 1603 aaPredicted RBP12.53□□□□□ -0.4
PDLIM5-207ENST00000503974 RRAGDQ9NQL2 400 aaPredicted RBP12.53□□□□□ -0.4
PDLIM5-207ENST00000503974 CD163L1Q9NR16 1453 aa12.53□□□□□ -0.4
PDLIM5-207ENST00000503974 RNF216Q9NWF9 866 aaPredicted RBP12.53□□□□□ -0.4
PDLIM5-207ENST00000503974 MON2Q7Z3U7 1717 aa12.53□□□□□ -0.4
PDLIM5-207ENST00000503974 PLEKHG3A1L390 1219 aa12.53□□□□□ -0.4
PDLIM5-207ENST00000503974 CPSF1Q10570 1443 aaKnown RBP12.52□□□□□ -0.4
PDLIM5-207ENST00000503974 NUTM2FA1L443 756 aa12.52□□□□□ -0.4
PDLIM5-207ENST00000503974 BRINP3Q76B58 766 aa12.52□□□□□ -0.4
PDLIM5-207ENST00000503974 NRKQ7Z2Y5 1582 aa12.52□□□□□ -0.41
PDLIM5-207ENST00000503974 NCLP19338 710 aaKnown RBP12.52□□□□□ -0.41
PDLIM5-207ENST00000503974 CDK11BP21127 795 aaKnown RBP12.52□□□□□ -0.41
PDLIM5-207ENST00000503974 ZNF830Q96NB3 372 aaPredicted RBP12.52□□□□□ -0.41
PDLIM5-207ENST00000503974 ORAI2Q96SN7 254 aa12.52□□□□□ -0.41
PDLIM5-207ENST00000503974 TAOK2Q9UL54 1235 aa12.52□□□□□ -0.41
PDLIM5-207ENST00000503974 UBAP1LF5GYI3 381 aa12.51□□□□□ -0.41
PDLIM5-207ENST00000503974 PHF8Q9UPP1 1060 aa12.5□□□□□ -0.41
PDLIM5-207ENST00000503974 TRPM3Q9HCF6 1732 aaPredicted RBP12.5□□□□□ -0.41
PDLIM5-207ENST00000503974 ESCO1Q5FWF5 840 aa12.5□□□□□ -0.41
PDLIM5-207ENST00000503974 PXDNQ92626 1479 aa12.5□□□□□ -0.41
PDLIM5-207ENST00000503974 ANKRD36BQ8N2N9 1353 aa12.5□□□□□ -0.41
PDLIM5-207ENST00000503974 TMEM51Q9NW97 253 aa12.49□□□□□ -0.41
PDLIM5-207ENST00000503974 CABP1Q9NZU7 370 aa12.49□□□□□ -0.41
PDLIM5-207ENST00000503974 FRAT1Q92837 279 aaPredicted RBP12.49□□□□□ -0.41
PDLIM5-207ENST00000503974 SSH2Q76I76 1423 aa12.49□□□□□ -0.41
PDLIM5-207ENST00000503974 A0A1W2PP64 1363 aa12.48□□□□□ -0.41
PDLIM5-207ENST00000503974 USP6P35125 1406 aa12.48□□□□□ -0.41
PDLIM5-207ENST00000503974 SLC12A5Q9H2X9 1139 aa12.48□□□□□ -0.41
PDLIM5-207ENST00000503974 BRD4O60885 1362 aaPredicted RBP12.48□□□□□ -0.41
PDLIM5-207ENST00000503974 COL16A1Q07092 1604 aaPredicted RBP12.48□□□□□ -0.41
PDLIM5-207ENST00000503974 ACEP12821 1306 aa12.48□□□□□ -0.41
PDLIM5-207ENST00000503974 NPHP3Q7Z494 1330 aa12.47□□□□□ -0.41
PDLIM5-207ENST00000503974 PMFBP1Q8TBY8 1022 aa12.47□□□□□ -0.41
PDLIM5-207ENST00000503974 ALS2Q96Q42 1657 aa12.46□□□□□ -0.41
PDLIM5-207ENST00000503974 SOS2Q07890 1332 aaPredicted RBP12.46□□□□□ -0.41
PDLIM5-207ENST00000503974 PHLPP1O60346 1717 aa12.46□□□□□ -0.41
PDLIM5-207ENST00000503974 PPP4R2Q9NY27 417 aa12.46□□□□□ -0.41
PDLIM5-207ENST00000503974 USP54Q70EL1 1684 aa12.46□□□□□ -0.42
PDLIM5-207ENST00000503974 PLCD3Q8N3E9 789 aa12.46□□□□□ -0.42
PDLIM5-207ENST00000503974 TMC1Q8TDI8 760 aa12.46□□□□□ -0.42
PDLIM5-207ENST00000503974 EDC4Q6P2E9 1401 aaKnown RBP12.45□□□□□ -0.42
PDLIM5-207ENST00000503974 ZNF692Q9BU19 519 aaPredicted RBP12.45□□□□□ -0.42
PDLIM5-207ENST00000503974 TERF2IPQ9NYB0 399 aa12.45□□□□□ -0.42
PDLIM5-207ENST00000503974 SBNO1A3KN83 1393 aa12.44□□□□□ -0.42
PDLIM5-207ENST00000503974 FOXO3O43524 673 aa12.44□□□□□ -0.42
PDLIM5-207ENST00000503974 NGDNQ8NEJ9 315 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms