RNA–Protein interactions for RNA: ENST00000503678.5

SMN2-204, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-204ENST00000503678 J3QL48 77 aa8.16□□□□□ -1.1
SMN2-204ENST00000503678 LORP23490 312 aaPredicted RBP8.16□□□□□ -1.1
SMN2-204ENST00000503678 PPP2R2DQ66LE6 453 aa8.16□□□□□ -1.1
SMN2-204ENST00000503678 SULF1Q8IWU6 871 aa8.16□□□□□ -1.1
SMN2-204ENST00000503678 ZSCAN1Q8NBB4 408 aa8.16□□□□□ -1.1
SMN2-204ENST00000503678 ZNF777Q9ULD5 760 aaPredicted RBP8.16□□□□□ -1.1
SMN2-204ENST00000503678 RFC5P40937 340 aa8.15□□□□□ -1.1
SMN2-204ENST00000503678 BRICD5Q6PL45 260 aa8.15□□□□□ -1.1
SMN2-204ENST00000503678 CCDC97Q96F63 343 aaPredicted RBP8.15□□□□□ -1.1
SMN2-204ENST00000503678 NXF1Q9UBU9 619 aaKnown RBP8.15□□□□□ -1.1
SMN2-204ENST00000503678 SLC27A5Q9Y2P5 690 aa8.15□□□□□ -1.1
SMN2-204ENST00000503678 COG6Q9Y2V7 657 aa8.15□□□□□ -1.1
SMN2-204ENST00000503678 ZBTB7CA1YPR0 619 aa8.14□□□□□ -1.11
SMN2-204ENST00000503678 FUT2Q10981 343 aa8.14□□□□□ -1.11
SMN2-204ENST00000503678 TUSC1Q2TAM9 212 aa8.14□□□□□ -1.11
SMN2-204ENST00000503678 HPS1Q92902 700 aa8.14□□□□□ -1.11
SMN2-204ENST00000503678 MRGPRX2Q96LB1 330 aa8.14□□□□□ -1.11
SMN2-204ENST00000503678 GMPRP36959 345 aa8.13□□□□□ -1.11
SMN2-204ENST00000503678 MSS51Q4VC12 460 aa8.13□□□□□ -1.11
SMN2-204ENST00000503678 NPAS3Q8IXF0 933 aa8.13□□□□□ -1.11
SMN2-204ENST00000503678 SOCS7O14512 581 aa8.12□□□□□ -1.11
SMN2-204ENST00000503678 TRIM32Q13049 653 aa8.12□□□□□ -1.11
SMN2-204ENST00000503678 RIC3Q7Z5B4 369 aa8.12□□□□□ -1.11
SMN2-204ENST00000503678 IRF7Q92985 503 aa8.12□□□□□ -1.11
SMN2-204ENST00000503678 PRDM9Q9NQV7 894 aa8.12□□□□□ -1.11
SMN2-204ENST00000503678 SNRKQ9NRH2 765 aa8.12□□□□□ -1.11
SMN2-204ENST00000503678 LIMD1Q9UGP4 676 aa8.12□□□□□ -1.11
SMN2-204ENST00000503678 RANGAP1P46060 587 aaPredicted RBP8.11□□□□□ -1.11
SMN2-204ENST00000503678 SPTLC1O15269 473 aa8.1□□□□□ -1.11
SMN2-204ENST00000503678 CD46P15529 392 aa8.1□□□□□ -1.11
SMN2-204ENST00000503678 GCGRP47871 477 aa8.1□□□□□ -1.11
SMN2-204ENST00000503678 SUZ12Q15022 739 aaKnown RBP8.1□□□□□ -1.11
SMN2-204ENST00000503678 SPIRE2Q8WWL2 714 aa8.1□□□□□ -1.11
SMN2-204ENST00000503678 ZNF330Q9Y3S2 320 aaPredicted RBP8.1□□□□□ -1.11
SMN2-204ENST00000503678 GJA5P36382 358 aa8.09□□□□□ -1.11
SMN2-204ENST00000503678 GRIPAP1Q4V328 841 aa8.09□□□□□ -1.11
SMN2-204ENST00000503678 WWC1Q8IX03 1113 aa8.09□□□□□ -1.11
SMN2-204ENST00000503678 MMP16P51512 607 aa8.08□□□□□ -1.12
SMN2-204ENST00000503678 RSBN1LQ6PCB5 846 aaPredicted RBP8.08□□□□□ -1.12
SMN2-204ENST00000503678 NUTM1Q86Y26 1132 aa8.08□□□□□ -1.12
SMN2-204ENST00000503678 PRM3Q9NNZ6 103 aa8.08□□□□□ -1.12
SMN2-204ENST00000503678 FBXO31Q5XUX0 539 aaPredicted RBP8.07□□□□□ -1.12
SMN2-204ENST00000503678 MTMR14Q8NCE2 650 aa8.07□□□□□ -1.12
SMN2-204ENST00000503678 TRAIPQ9BWF2 469 aa8.07□□□□□ -1.12
SMN2-204ENST00000503678 RC3H1Q5TC82 1133 aaKnown RBP8.06□□□□□ -1.12
SMN2-204ENST00000503678 RNF19BQ6ZMZ0 732 aa8.06□□□□□ -1.12
SMN2-204ENST00000503678 H3BM21 787 aa8.05□□□□□ -1.12
SMN2-204ENST00000503678 KCTD17Q8N5Z5 321 aa8.04□□□□□ -1.12
SMN2-204ENST00000503678 GDPD2Q9HCC8 539 aa8.04□□□□□ -1.12
SMN2-204ENST00000503678 CCDC9Q9Y3X0 531 aaKnown RBP8.04□□□□□ -1.12
SMN2-204ENST00000503678 MOXD2PA6NHM9 499 aa8.03□□□□□ -1.12
SMN2-204ENST00000503678 LILRB3O75022 631 aa8.03□□□□□ -1.12
SMN2-204ENST00000503678 WNT7BP56706 349 aa8.03□□□□□ -1.12
SMN2-204ENST00000503678 Q3C1V9 767 aa8.03□□□□□ -1.12
SMN2-204ENST00000503678 PRPF38BQ5VTL8 546 aaKnown RBP8.02□□□□□ -1.13
SMN2-204ENST00000503678 PPP1R15AO75807 674 aaPredicted RBP8.01□□□□□ -1.13
SMN2-204ENST00000503678 ABL2P42684 1182 aa8.01□□□□□ -1.13
SMN2-204ENST00000503678 SKOR1P84550 965 aa8.01□□□□□ -1.13
SMN2-204ENST00000503678 QPCTQ16769 361 aa8.01□□□□□ -1.13
SMN2-204ENST00000503678 CSPP1Q1MSJ5 1256 aa8.01□□□□□ -1.13
SMN2-204ENST00000503678 NPM2Q86SE8 214 aaKnown RBP8.01□□□□□ -1.13
SMN2-204ENST00000503678 ERBB4Q15303 1308 aa8.01□□□□□ -1.13
SMN2-204ENST00000503678 KDM4AO75164 1064 aa8□□□□□ -1.13
SMN2-204ENST00000503678 AP1G2O75843 785 aa8□□□□□ -1.13
SMN2-204ENST00000503678 DXOO77932 396 aaKnown RBP8□□□□□ -1.13
SMN2-204ENST00000503678 ALDH1A1P00352 501 aa8□□□□□ -1.13
SMN2-204ENST00000503678 VEGFBP49765 207 aa8□□□□□ -1.13
SMN2-204ENST00000503678 USP46P62068 366 aa8□□□□□ -1.13
SMN2-204ENST00000503678 TRIM46Q7Z4K8 759 aa8□□□□□ -1.13
SMN2-204ENST00000503678 CALR3Q96L12 384 aaKnown RBP8□□□□□ -1.13
SMN2-204ENST00000503678 CAPN5O15484 640 aaPredicted RBP7.99□□□□□ -1.13
SMN2-204ENST00000503678 NDUFV2P19404 249 aa7.99□□□□□ -1.13
SMN2-204ENST00000503678 USB1Q9BQ65 265 aaKnown RBP7.99□□□□□ -1.13
SMN2-204ENST00000503678 NUTM2BA6NNL0 878 aaPredicted RBP7.98□□□□□ -1.13
SMN2-204ENST00000503678 NUTM2EB1AL46 878 aaPredicted RBP7.98□□□□□ -1.13
SMN2-204ENST00000503678 USP17L8P0C7I0 530 aa7.98□□□□□ -1.13
SMN2-204ENST00000503678 KCNMA1Q12791 1236 aa7.98□□□□□ -1.13
SMN2-204ENST00000503678 RTL5Q5HYW3 569 aaPredicted RBP7.98□□□□□ -1.13
SMN2-204ENST00000503678 NUTM2DQ5VT03 806 aaPredicted RBP7.98□□□□□ -1.13
SMN2-204ENST00000503678 NUTM2AQ8IVF1 878 aaPredicted RBP7.98□□□□□ -1.13
SMN2-204ENST00000503678 GLMNQ92990 594 aa7.98□□□□□ -1.13
SMN2-204ENST00000503678 ZBTB3Q9H5J0 574 aa7.98□□□□□ -1.13
SMN2-204ENST00000503678 TBC1D2BQ9UPU7 963 aa7.98□□□□□ -1.13
SMN2-204ENST00000503678 PCDHB15Q9Y5E8 787 aa7.98□□□□□ -1.13
SMN2-204ENST00000503678 SIAH2O43255 324 aa7.97□□□□□ -1.13
SMN2-204ENST00000503678 BMP1P13497 986 aa7.97□□□□□ -1.13
SMN2-204ENST00000503678 PDE4CQ08493 712 aa7.97□□□□□ -1.13
SMN2-204ENST00000503678 RETREG2Q8NC44 543 aa7.97□□□□□ -1.13
SMN2-204ENST00000503678 NDUFB9Q9Y6M9 179 aa7.97□□□□□ -1.13
SMN2-204ENST00000503678 CCDC24Q8N4L8 307 aa7.96□□□□□ -1.14
SMN2-204ENST00000503678 HOXA2O43364 376 aa7.95□□□□□ -1.14
SMN2-204ENST00000503678 CABLES1Q8TDN4 633 aa7.95□□□□□ -1.14
SMN2-204ENST00000503678 ACIN1Q9UKV3 1341 aaKnown RBP7.95□□□□□ -1.14
SMN2-204ENST00000503678 POM121CA8CG34 1229 aa7.94□□□□□ -1.14
SMN2-204ENST00000503678 FDX1P10109 184 aa7.94□□□□□ -1.14
SMN2-204ENST00000503678 WASHC4Q2M389 1173 aa7.94□□□□□ -1.14
SMN2-204ENST00000503678 GJD4Q96KN9 370 aaPredicted RBP7.94□□□□□ -1.14
SMN2-204ENST00000503678 WASF2Q9Y6W5 498 aa7.94□□□□□ -1.14
SMN2-204ENST00000503678 AEBP1Q8IUX7 1158 aa7.93□□□□□ -1.14
SMN2-204ENST00000503678 ZFP42Q96MM3 310 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms