RNA–Protein interactions for RNA: ENST00000503477.5

AFF1-204, Transcript of AF4/FMR2 family member 1, humanhuman

TSL 2

Gene AFF1, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-204ENST00000503477 ESCO1Q5FWF5 840 aa22.72■■□□□ 1.23
AFF1-204ENST00000503477 MORC1Q86VD1 984 aa22.72■■□□□ 1.23
AFF1-204ENST00000503477 SSH2Q76I76 1423 aa22.72■■□□□ 1.23
AFF1-204ENST00000503477 NRKQ7Z2Y5 1582 aa22.71■■□□□ 1.23
AFF1-204ENST00000503477 KIF1AQ12756 1690 aa22.7■■□□□ 1.22
AFF1-204ENST00000503477 TTC21BQ7Z4L5 1316 aa22.7■■□□□ 1.22
AFF1-204ENST00000503477 TTC21AQ8NDW8 1320 aa22.7■■□□□ 1.22
AFF1-204ENST00000503477 PPP2R1AP30153 589 aa22.69■■□□□ 1.22
AFF1-204ENST00000503477 MRS2Q9HD23 443 aa22.69■■□□□ 1.22
AFF1-204ENST00000503477 LTBP4Q8N2S1 1624 aa22.69■■□□□ 1.22
AFF1-204ENST00000503477 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.68■■□□□ 1.222e-6■■□□□ 12
AFF1-204ENST00000503477 ORAI2Q96SN7 254 aa22.66■■□□□ 1.22
AFF1-204ENST00000503477 GGNBP2Q9H3C7 697 aa22.66■■□□□ 1.22
AFF1-204ENST00000503477 SCAF1Q9H7N4 1312 aaKnown RBP22.65■■□□□ 1.22
AFF1-204ENST00000503477 CCDC184Q52MB2 194 aa22.65■■□□□ 1.22
AFF1-204ENST00000503477 PSME1Q06323 249 aa22.63■■□□□ 1.21
AFF1-204ENST00000503477 NME9Q86XW9 330 aa22.63■■□□□ 1.21
AFF1-204ENST00000503477 COG3Q96JB2 828 aa22.62■■□□□ 1.21
AFF1-204ENST00000503477 SLAIN2Q9P270 581 aa22.61■■□□□ 1.21
AFF1-204ENST00000503477 USP31Q70CQ4 1352 aa22.61■■□□□ 1.21
AFF1-204ENST00000503477 FOXO3O43524 673 aa22.59■■□□□ 1.21
AFF1-204ENST00000503477 OVOS2A0A0J9YW53 1432 aa22.58■■□□□ 1.21
AFF1-204ENST00000503477 OVOS2Q6IE36 1432 aa22.58■■□□□ 1.21
AFF1-204ENST00000503477 PNISRQ8TF01 805 aaKnown RBP22.58■■□□□ 1.2
AFF1-204ENST00000503477 AATKQ6ZMQ8 1374 aa22.57■■□□□ 1.2
AFF1-204ENST00000503477 USP54Q70EL1 1684 aa22.57■■□□□ 1.2
AFF1-204ENST00000503477 NPHP3Q7Z494 1330 aa22.57■■□□□ 1.2
AFF1-204ENST00000503477 TNNT2P45379 298 aaPredicted RBP22.56■■□□□ 1.2
AFF1-204ENST00000503477 PIK3C2AO00443 1686 aa22.56■■□□□ 1.2
AFF1-204ENST00000503477 KRT28Q7Z3Y7 464 aa22.55■■□□□ 1.2
AFF1-204ENST00000503477 BRINP3Q76B58 766 aa22.54■■□□□ 1.2
AFF1-204ENST00000503477 ZRANB1Q9UGI0 708 aa22.54■■□□□ 1.2
AFF1-204ENST00000503477 PAK3O75914 559 aaPredicted RBP22.54■■□□□ 1.2
AFF1-204ENST00000503477 MTHFSP49914 203 aa22.54■■□□□ 1.2
AFF1-204ENST00000503477 ABTB2Q8N961 1025 aa22.54■■□□□ 1.2
AFF1-204ENST00000503477 TRPM3Q9HCF6 1732 aaPredicted RBP22.53■■□□□ 1.2
AFF1-204ENST00000503477 CFAP53Q96M91 514 aa22.53■■□□□ 1.2
AFF1-204ENST00000503477 NLRP6P59044 892 aa22.52■■□□□ 1.2
AFF1-204ENST00000503477 SBNO1A3KN83 1393 aa22.52■■□□□ 1.19
AFF1-204ENST00000503477 FAM9BQ8IZU0 186 aa22.51■■□□□ 1.19
AFF1-204ENST00000503477 INSRP06213 1382 aa22.5■■□□□ 1.19
AFF1-204ENST00000503477 SMG6Q86US8 1419 aaKnown RBP22.49■■□□□ 1.19
AFF1-204ENST00000503477 MAP2P11137 1827 aaKnown RBP22.48■■□□□ 1.19
AFF1-204ENST00000503477 IQSEC2Q5JU85 1478 aa22.48■■□□□ 1.19
AFF1-204ENST00000503477 POLKQ9UBT6 870 aa22.48■■□□□ 1.19
AFF1-204ENST00000503477 PXDNQ92626 1479 aa22.48■■□□□ 1.19
AFF1-204ENST00000503477 PNPLA6Q8IY17 1366 aa22.48■■□□□ 1.19
AFF1-204ENST00000503477 MARF1Q9Y4F3 1742 aaKnown RBP22.47■■□□□ 1.19
AFF1-204ENST00000503477 ALS2Q96Q42 1657 aa22.46■■□□□ 1.19
AFF1-204ENST00000503477 XPCQ01831 940 aaPredicted RBP22.46■■□□□ 1.19
AFF1-204ENST00000503477 YTHDC1Q96MU7 727 aaKnown RBP22.46■■□□□ 1.19
AFF1-204ENST00000503477 SOS2Q07890 1332 aaPredicted RBP22.45■■□□□ 1.18
AFF1-204ENST00000503477 WDR43Q15061 677 aaKnown RBP eCLIP22.45■■□□□ 1.18
AFF1-204ENST00000503477 KCNH5Q8NCM2 988 aa22.44■■□□□ 1.18
AFF1-204ENST00000503477 CDK12Q9NYV4 1490 aaPredicted RBP22.44■■□□□ 1.18
AFF1-204ENST00000503477 NHSL1Q5SYE7 1610 aa22.44■■□□□ 1.18
AFF1-204ENST00000503477 TNS3Q68CZ2 1445 aa22.43■■□□□ 1.18
AFF1-204ENST00000503477 KIF24Q5T7B8 1368 aa22.43■■□□□ 1.18
AFF1-204ENST00000503477 SPATA31A3Q5VYP0 1347 aa22.43■■□□□ 1.18
AFF1-204ENST00000503477 TOM1O60784 492 aa22.42■■□□□ 1.18
AFF1-204ENST00000503477 ARHGEF10O15013 1369 aa22.42■■□□□ 1.18
AFF1-204ENST00000503477 COL3A1P02461 1466 aaPredicted RBP22.42■■□□□ 1.18
AFF1-204ENST00000503477 NUTM2GQ5VZR2 741 aa22.41■■□□□ 1.18
AFF1-204ENST00000503477 DDX17Q92841 729 aaKnown RBP22.41■■□□□ 1.18
AFF1-204ENST00000503477 USP19O94966 1318 aa22.41■■□□□ 1.18
AFF1-204ENST00000503477 FBLN1P23142 703 aa22.41■■□□□ 1.18
AFF1-204ENST00000503477 NUDCQ9Y266 331 aa22.41■■□□□ 1.18
AFF1-204ENST00000503477 EMILIN1Q9Y6C2 1016 aa22.41■■□□□ 1.18
AFF1-204ENST00000503477 SLIT3O75094 1523 aa22.4■■□□□ 1.18
AFF1-204ENST00000503477 SHPRHQ149N8 1683 aa22.4■■□□□ 1.18
AFF1-204ENST00000503477 ROBO1Q9Y6N7 1651 aa22.39■■□□□ 1.17
AFF1-204ENST00000503477 RRS1Q15050 365 aaKnown RBP22.39■■□□□ 1.17
AFF1-204ENST00000503477 LMOD2Q6P5Q4 547 aa22.39■■□□□ 1.17
AFF1-204ENST00000503477 ADAMTS8Q9UP79 889 aa22.39■■□□□ 1.17
AFF1-204ENST00000503477 PPM1GO15355 546 aaPredicted RBP22.38■■□□□ 1.17
AFF1-204ENST00000503477 DIAPH1O60610 1272 aaKnown RBP22.38■■□□□ 1.17
AFF1-204ENST00000503477 MAP3K19Q56UN5 1328 aa22.38■■□□□ 1.17
AFF1-204ENST00000503477 AHDC1Q5TGY3 1603 aaPredicted RBP22.37■■□□□ 1.17
AFF1-204ENST00000503477 NFAT5O94916 1531 aa22.37■■□□□ 1.17
AFF1-204ENST00000503477 GCP02774 474 aa22.36■■□□□ 1.17
AFF1-204ENST00000503477 BLMP54132 1417 aaPredicted RBP22.36■■□□□ 1.17
AFF1-204ENST00000503477 FLT4P35916 1363 aa22.36■■□□□ 1.17
AFF1-204ENST00000503477 HNRNPUQ00839 825 aaKnown RBP eCLIP22.35■■□□□ 1.17
AFF1-204ENST00000503477 MED1Q15648 1581 aaPredicted RBP22.35■■□□□ 1.17
AFF1-204ENST00000503477 RTL1A6NKG5 1358 aa22.34■■□□□ 1.17
AFF1-204ENST00000503477 SOX12O15370 315 aa22.34■■□□□ 1.17
AFF1-204ENST00000503477 CERKQ8TCT0 537 aa22.34■■□□□ 1.17
AFF1-204ENST00000503477 PHRF1Q9P1Y6 1649 aaKnown RBP22.33■■□□□ 1.17
AFF1-204ENST00000503477 PEAK1Q9H792 1746 aa22.33■■□□□ 1.17
AFF1-204ENST00000503477 AMPHP49418 695 aa22.33■■□□□ 1.16
AFF1-204ENST00000503477 CENPBP07199 599 aaPredicted RBP22.31■■□□□ 1.16
AFF1-204ENST00000503477 LRRC59Q96AG4 307 aaKnown RBP22.31■■□□□ 1.16
AFF1-204ENST00000503477 LTN1O94822 1766 aa22.3■■□□□ 1.16
AFF1-204ENST00000503477 IL13P35225 146 aa22.3■■□□□ 1.16
AFF1-204ENST00000503477 CRYBG1Q9Y4K1 1723 aa22.3■■□□□ 1.16
AFF1-204ENST00000503477 UBAP1LF5GYI3 381 aa22.29■■□□□ 1.16
AFF1-204ENST00000503477 U2AF1L5P0DN76 240 aaPredicted RBP22.29■■□□□ 1.16
AFF1-204ENST00000503477 U2AF1Q01081 240 aaKnown RBP eCLIP22.29■■□□□ 1.16
AFF1-204ENST00000503477 ARHGEF25Q86VW2 580 aa22.29■■□□□ 1.16
AFF1-204ENST00000503477 PNNQ9H307 717 aaKnown RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 1313.3 ms