RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 ATF7IPQ6VMQ6 1270 aa30.99■■■□□ 2.55
DDX41-202ENST00000503078 U2SURPO15042 1029 aaKnown RBP30.99■■■□□ 2.55
DDX41-202ENST00000503078 ITPRIPQ8IWB1 547 aa30.99■■■□□ 2.55
DDX41-202ENST00000503078 NEXMIFQ5QGS0 1516 aa30.98■■■□□ 2.55
DDX41-202ENST00000503078 MFAP1P55081 439 aaKnown RBP30.98■■■□□ 2.55
DDX41-202ENST00000503078 COL3A1P02461 1466 aaPredicted RBP30.98■■■□□ 2.55
DDX41-202ENST00000503078 IL16Q14005 1332 aa30.97■■■□□ 2.55
DDX41-202ENST00000503078 A0A1W2PP64 1363 aa30.97■■■□□ 2.55
DDX41-202ENST00000503078 RIMBP3CA6NJZ7 1639 aa30.97■■■□□ 2.55
DDX41-202ENST00000503078 RIMBP3BA6NNM3 1639 aa30.97■■■□□ 2.55
DDX41-202ENST00000503078 RIMBP3Q9UFD9 1639 aa30.97■■■□□ 2.55
DDX41-202ENST00000503078 NUTM2DQ5VT03 806 aaPredicted RBP30.96■■■□□ 2.55
DDX41-202ENST00000503078 SMC5Q8IY18 1101 aa30.96■■■□□ 2.55
DDX41-202ENST00000503078 PIK3C2BO00750 1634 aa30.96■■■□□ 2.55
DDX41-202ENST00000503078 MCM4P33991 863 aa30.95■■■□□ 2.55
DDX41-202ENST00000503078 SPRYD3Q8NCJ5 442 aa30.95■■■□□ 2.55
DDX41-202ENST00000503078 SIGLEC1Q9BZZ2 1709 aa30.94■■■□□ 2.54
DDX41-202ENST00000503078 CHMP5Q9NZZ3 219 aa30.94■■■□□ 2.54
DDX41-202ENST00000503078 NOB1Q9ULX3 412 aaKnown RBP30.94■■■□□ 2.54
DDX41-202ENST00000503078 GGNBP2Q9H3C7 697 aa30.92■■■□□ 2.54
DDX41-202ENST00000503078 YEATS2Q9ULM3 1422 aa30.91■■■□□ 2.54
DDX41-202ENST00000503078 SAFB2Q14151 953 aaKnown RBP eCLIP30.91■■■□□ 2.54
DDX41-202ENST00000503078 PRKCSHP14314 528 aaPredicted RBP30.9■■■□□ 2.54
DDX41-202ENST00000503078 TMEM57Q8N5G2 664 aa30.9■■■□□ 2.54
DDX41-202ENST00000503078 ZBTB40Q9NUA8 1239 aa30.9■■■□□ 2.54
DDX41-202ENST00000503078 ANKRD26Q9UPS8 1709 aa30.89■■■□□ 2.53
DDX41-202ENST00000503078 SRPK2P78362 688 aaKnown RBP30.88■■■□□ 2.53
DDX41-202ENST00000503078 KIF16BQ96L93 1317 aa30.88■■■□□ 2.53
DDX41-202ENST00000503078 RIPK4P57078 832 aa30.87■■■□□ 2.53
DDX41-202ENST00000503078 MED14O60244 1454 aa30.87■■■□□ 2.53
DDX41-202ENST00000503078 IPO8O15397 1037 aaKnown RBP30.87■■■□□ 2.53
DDX41-202ENST00000503078 RSPH6AQ9H0K4 717 aa30.87■■■□□ 2.53
DDX41-202ENST00000503078 GOLGA6L3A6NEY3 463 aa30.86■■■□□ 2.53
DDX41-202ENST00000503078 FSD2A1L4K1 749 aa30.86■■■□□ 2.53
DDX41-202ENST00000503078 ARHGAP31Q2M1Z3 1444 aa30.86■■■□□ 2.53
DDX41-202ENST00000503078 HSCBQ8IWL3 235 aa30.85■■■□□ 2.53
DDX41-202ENST00000503078 FYB1O15117 783 aa30.85■■■□□ 2.53
DDX41-202ENST00000503078 DIP2BQ9P265 1576 aa30.85■■■□□ 2.53
DDX41-202ENST00000503078 TERF2IPQ9NYB0 399 aa30.84■■■□□ 2.53
DDX41-202ENST00000503078 ATAD2Q6PL18 1390 aa30.84■■■□□ 2.53
DDX41-202ENST00000503078 ZFYVE9O95405 1425 aa30.84■■■□□ 2.53
DDX41-202ENST00000503078 PNNQ9H307 717 aaKnown RBP30.84■■■□□ 2.53
DDX41-202ENST00000503078 NUCB1Q02818 461 aa30.83■■■□□ 2.53
DDX41-202ENST00000503078 XRCC6P12956 609 aaKnown RBP eCLIP30.82■■■□□ 2.52
DDX41-202ENST00000503078 FAM69CQ0P6D2 419 aa30.82■■■□□ 2.52
DDX41-202ENST00000503078 ALDH1L2Q3SY69 923 aa30.82■■■□□ 2.52
DDX41-202ENST00000503078 STK26Q9P289 416 aa30.82■■■□□ 2.52
DDX41-202ENST00000503078 DIAPH1O60610 1272 aaKnown RBP30.81■■■□□ 2.52
DDX41-202ENST00000503078 TRAK2O60296 914 aa30.8■■■□□ 2.52
DDX41-202ENST00000503078 RBM25P49756 843 aaKnown RBP30.8■■■□□ 2.52
DDX41-202ENST00000503078 CD163L1Q9NR16 1453 aa30.79■■■□□ 2.52
DDX41-202ENST00000503078 ZNF692Q9BU19 519 aaPredicted RBP30.79■■■□□ 2.52
DDX41-202ENST00000503078 RRAGDQ9NQL2 400 aaPredicted RBP30.79■■■□□ 2.52
DDX41-202ENST00000503078 NCOA3Q9Y6Q9 1424 aa30.79■■■□□ 2.52
DDX41-202ENST00000503078 PNPLA6Q8IY17 1366 aa30.79■■■□□ 2.52
DDX41-202ENST00000503078 GZF1Q9H116 711 aaPredicted RBP30.78■■■□□ 2.52
DDX41-202ENST00000503078 PTPRMP28827 1452 aa30.78■■■□□ 2.52
DDX41-202ENST00000503078 IDI1Q13907 227 aa30.78■■■□□ 2.52
DDX41-202ENST00000503078 CLTCQ00610 1675 aaKnown RBP30.77■■■□□ 2.52
DDX41-202ENST00000503078 EIF5BO60841 1220 aaKnown RBP30.76■■■□□ 2.51
DDX41-202ENST00000503078 SNX21Q969T3 373 aa30.76■■■□□ 2.51
DDX41-202ENST00000503078 CHD1LQ86WJ1 897 aa30.76■■■□□ 2.51
DDX41-202ENST00000503078 ARXQ96QS3 562 aa30.76■■■□□ 2.51
DDX41-202ENST00000503078 LNPKQ9C0E8 428 aa30.76■■■□□ 2.51
DDX41-202ENST00000503078 DDX11L8A8MPP1 907 aa30.75■■■□□ 2.51
DDX41-202ENST00000503078 MINK1Q8N4C8 1332 aaPredicted RBP30.75■■■□□ 2.51
DDX41-202ENST00000503078 DDIT3P35638 169 aa30.74■■■□□ 2.51
DDX41-202ENST00000503078 FCHSD2O94868 740 aa30.73■■■□□ 2.51
DDX41-202ENST00000503078 BRPF1P55201 1214 aaPredicted RBP30.73■■■□□ 2.51
DDX41-202ENST00000503078 ZNF428Q96B54 188 aa30.73■■■□□ 2.51
DDX41-202ENST00000503078 CDC42BPGQ6DT37 1551 aa30.73■■■□□ 2.51
DDX41-202ENST00000503078 HDGFL2Q7Z4V5 671 aaPredicted RBP30.72■■■□□ 2.51
DDX41-202ENST00000503078 PRAM1Q96QH2 718 aa30.72■■■□□ 2.51
DDX41-202ENST00000503078 SLC52A1Q9NWF4 448 aa30.72■■■□□ 2.51
DDX41-202ENST00000503078 LRRC7Q96NW7 1537 aa30.71■■■□□ 2.51
DDX41-202ENST00000503078 BMP2KLQ5H9B9 411 aa30.7■■■□□ 2.51
DDX41-202ENST00000503078 TSPOAP1O95153 1857 aa30.69■■■□□ 2.5
DDX41-202ENST00000503078 PPIP5K1Q6PFW1 1433 aa30.69■■■□□ 2.5
DDX41-202ENST00000503078 KIF20BQ96Q89 1820 aa30.69■■■□□ 2.5
DDX41-202ENST00000503078 PANK2Q9BZ23 570 aa30.69■■■□□ 2.5
DDX41-202ENST00000503078 YTHDC2Q9H6S0 1430 aaKnown RBP30.68■■■□□ 2.5
DDX41-202ENST00000503078 MYO5BQ9ULV0 1848 aa30.68■■■□□ 2.5
DDX41-202ENST00000503078 MRE11P49959 708 aa30.68■■■□□ 2.5
DDX41-202ENST00000503078 SENP3Q9H4L4 574 aaPredicted RBP30.68■■■□□ 2.5
DDX41-202ENST00000503078 FAM135BQ49AJ0 1406 aa30.67■■■□□ 2.5
DDX41-202ENST00000503078 PREX1Q8TCU6 1659 aa30.66■■■□□ 2.5
DDX41-202ENST00000503078 GCC1Q96CN9 775 aa30.66■■■□□ 2.5
DDX41-202ENST00000503078 CHMP4BQ9H444 224 aaKnown RBP30.66■■■□□ 2.5
DDX41-202ENST00000503078 CIZ1Q9ULV3 898 aaPredicted RBP30.66■■■□□ 2.5
DDX41-202ENST00000503078 ZBTB7BO15156 539 aaPredicted RBP30.65■■■□□ 2.5
DDX41-202ENST00000503078 PRKAR2BP31323 418 aa30.65■■■□□ 2.5
DDX41-202ENST00000503078 TMEM131LA2VDJ0 1609 aa30.64■■■□□ 2.5
DDX41-202ENST00000503078 ANKRD45Q5TZF3 282 aa30.63■■■□□ 2.49
DDX41-202ENST00000503078 ARHGAP45Q92619 1136 aa30.63■■■□□ 2.49
DDX41-202ENST00000503078 ISY1Q9ULR0 285 aaKnown RBP30.63■■■□□ 2.49
DDX41-202ENST00000503078 PIK3R4Q99570 1358 aa30.63■■■□□ 2.49
DDX41-202ENST00000503078 HSP90AB1P08238 724 aaKnown RBP30.63■■■□□ 2.49
DDX41-202ENST00000503078 CDK19Q9BWU1 502 aa30.63■■■□□ 2.49
DDX41-202ENST00000503078 REREQ9P2R6 1566 aa30.62■■■□□ 2.49
DDX41-202ENST00000503078 PTCH1Q13635 1447 aa30.62■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms