RNA–Protein interactions for RNA: ENST00000502816.1

TRIO-204, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 736 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-204ENST00000502816 NWD2Q9ULI1 1742 aa35.37■■■■□ 3.25
TRIO-204ENST00000502816 EVC2Q86UK5 1308 aa35.37■■■■□ 3.25
TRIO-204ENST00000502816 PPIP5K1Q6PFW1 1433 aa35.37■■■■□ 3.25
TRIO-204ENST00000502816 SBNO2Q9Y2G9 1366 aa35.37■■■■□ 3.25
TRIO-204ENST00000502816 RGS12O14924 1447 aa35.35■■■■□ 3.25
TRIO-204ENST00000502816 UNC5CLQ8IV45 518 aa35.35■■■■□ 3.25
TRIO-204ENST00000502816 HAP1P54257 671 aaPredicted RBP35.34■■■■□ 3.25
TRIO-204ENST00000502816 CARD11Q9BXL7 1154 aa35.34■■■■□ 3.25
TRIO-204ENST00000502816 PAK3O75914 559 aaPredicted RBP35.33■■■■□ 3.25
TRIO-204ENST00000502816 BRD4O60885 1362 aaPredicted RBP35.33■■■■□ 3.25
TRIO-204ENST00000502816 PLCH1Q4KWH8 1693 aa35.33■■■■□ 3.25
TRIO-204ENST00000502816 CLSPNQ9HAW4 1339 aa35.31■■■■□ 3.24
TRIO-204ENST00000502816 FAM83GA6ND36 823 aa35.29■■■■□ 3.24
TRIO-204ENST00000502816 GJD4Q96KN9 370 aaPredicted RBP35.28■■■■□ 3.24
TRIO-204ENST00000502816 CABP1Q9NZU7 370 aa35.28■■■■□ 3.24
TRIO-204ENST00000502816 COL14A1Q05707 1796 aaKnown RBP35.26■■■■□ 3.24
TRIO-204ENST00000502816 PHRF1Q9P1Y6 1649 aaKnown RBP35.25■■■■□ 3.23
TRIO-204ENST00000502816 GLI3P10071 1580 aa35.23■■■■□ 3.23
TRIO-204ENST00000502816 PLEKHG5O94827 1062 aa35.23■■■■□ 3.23
TRIO-204ENST00000502816 TIMELESSQ9UNS1 1208 aa35.23■■■■□ 3.23
TRIO-204ENST00000502816 VPS72Q15906 364 aa35.22■■■■□ 3.23
TRIO-204ENST00000502816 NRAPQ86VF7 1730 aa35.22■■■■□ 3.23
TRIO-204ENST00000502816 USP6P35125 1406 aa35.22■■■■□ 3.23
TRIO-204ENST00000502816 SSH2Q76I76 1423 aa35.22■■■■□ 3.23
TRIO-204ENST00000502816 UPF1Q92900 1129 aaKnown RBP eCLIP35.21■■■■□ 3.23
TRIO-204ENST00000502816 PCGF6Q9BYE7 350 aa35.21■■■■□ 3.23
TRIO-204ENST00000502816 ATAD2Q6PL18 1390 aa35.21■■■■□ 3.23
TRIO-204ENST00000502816 AKAP12Q02952 1782 aa35.19■■■■□ 3.22
TRIO-204ENST00000502816 ABTB2Q8N961 1025 aa35.18■■■■□ 3.22
TRIO-204ENST00000502816 USP19O94966 1318 aa35.17■■■■□ 3.22
TRIO-204ENST00000502816 ZNF692Q9BU19 519 aaPredicted RBP35.17■■■■□ 3.22
TRIO-204ENST00000502816 PUS7Q96PZ0 661 aaKnown RBP35.15■■■■□ 3.22
TRIO-204ENST00000502816 CPSF1Q10570 1443 aaKnown RBP35.15■■■■□ 3.22
TRIO-204ENST00000502816 ONECUT3O60422 494 aaPredicted RBP35.14■■■■□ 3.22
TRIO-204ENST00000502816 BTG4Q9NY30 223 aa35.14■■■■□ 3.22
TRIO-204ENST00000502816 NRKQ7Z2Y5 1582 aa35.13■■■■□ 3.21
TRIO-204ENST00000502816 NLRP13Q86W25 1043 aa35.13■■■■□ 3.21
TRIO-204ENST00000502816 NUTM2GQ5VZR2 741 aa35.12■■■■□ 3.21
TRIO-204ENST00000502816 KIAA0232Q92628 1395 aa35.12■■■■□ 3.21
TRIO-204ENST00000502816 TESK2Q96S53 571 aa35.1■■■■□ 3.21
TRIO-204ENST00000502816 PRDM11Q9NQV5 511 aa35.1■■■■□ 3.21
TRIO-204ENST00000502816 CPDO75976 1380 aa35.1■■■■□ 3.21
TRIO-204ENST00000502816 SLC24A1O60721 1099 aa35.09■■■■□ 3.21
TRIO-204ENST00000502816 PIK3C2AO00443 1686 aa35.08■■■■□ 3.21
TRIO-204ENST00000502816 ST20-MTHFSA0A0A6YYL1 179 aa35.06■■■■□ 3.2
TRIO-204ENST00000502816 MON2Q7Z3U7 1717 aa35.06■■■■□ 3.2
TRIO-204ENST00000502816 GCP02774 474 aa35.05■■■■□ 3.2
TRIO-204ENST00000502816 SLIT3O75094 1523 aa35.05■■■■□ 3.2
TRIO-204ENST00000502816 ZC3H6P61129 1189 aaKnown RBP35.04■■■■□ 3.2
TRIO-204ENST00000502816 TTC21BQ7Z4L5 1316 aa35.04■■■■□ 3.2
TRIO-204ENST00000502816 CD163L1Q9NR16 1453 aa35.03■■■■□ 3.2
TRIO-204ENST00000502816 LMO7Q8WWI1 1683 aa35.03■■■■□ 3.2
TRIO-204ENST00000502816 EP400Q96L91 3159 aa35.03■■■■□ 3.2
TRIO-204ENST00000502816 BRWD3Q6RI45 1802 aa35.03■■■■□ 3.2
TRIO-204ENST00000502816 TTC21AQ8NDW8 1320 aa35.03■■■■□ 3.2
TRIO-204ENST00000502816 NLRP6P59044 892 aa35.01■■■■□ 3.2
TRIO-204ENST00000502816 SPATA31A5Q5VU36 1347 aa35.01■■■■□ 3.19
TRIO-204ENST00000502816 SPATA31A7Q8IWB4 1347 aa35.01■■■■□ 3.19
TRIO-204ENST00000502816 KTN1Q86UP2 1357 aaKnown RBP35■■■■□ 3.19
TRIO-204ENST00000502816 CHRNA2Q15822 529 aa35■■■■□ 3.19
TRIO-204ENST00000502816 SEPT12Q8IYM1 358 aa34.99■■■■□ 3.19
TRIO-204ENST00000502816 CCDC9Q9Y3X0 531 aaKnown RBP34.99■■■■□ 3.19
TRIO-204ENST00000502816 CAMTA1Q9Y6Y1 1673 aa34.97■■■■□ 3.19
TRIO-204ENST00000502816 USP47Q96K76 1375 aa34.96■■■■□ 3.19
TRIO-204ENST00000502816 SLC12A5Q9H2X9 1139 aa34.95■■■■□ 3.19
TRIO-204ENST00000502816 USP54Q70EL1 1684 aa34.95■■■■□ 3.18
TRIO-204ENST00000502816 NINLQ9Y2I6 1382 aa34.94■■■■□ 3.18
TRIO-204ENST00000502816 SPATA31A1Q5TZJ5 1347 aa34.92■■■■□ 3.18
TRIO-204ENST00000502816 COL18A1P39060 1754 aa34.9■■■■□ 3.18
TRIO-204ENST00000502816 USP31Q70CQ4 1352 aa34.9■■■■□ 3.18
TRIO-204ENST00000502816 THSD7AQ9UPZ6 1657 aa34.9■■■■□ 3.18
TRIO-204ENST00000502816 CCDC125Q86Z20 511 aa34.9■■■■□ 3.18
TRIO-204ENST00000502816 TMC1Q8TDI8 760 aa34.9■■■■□ 3.18
TRIO-204ENST00000502816 AATKQ6ZMQ8 1374 aa34.89■■■■□ 3.18
TRIO-204ENST00000502816 FAM98CQ17RN3 349 aaKnown RBP34.89■■■■□ 3.18
TRIO-204ENST00000502816 HDGFL2Q7Z4V5 671 aaPredicted RBP34.89■■■■□ 3.18
TRIO-204ENST00000502816 KCNH5Q8NCM2 988 aa34.88■■■■□ 3.17
TRIO-204ENST00000502816 TERF2IPQ9NYB0 399 aa34.88■■■■□ 3.17
TRIO-204ENST00000502816 EDC4Q6P2E9 1401 aaKnown RBP34.88■■■■□ 3.17
TRIO-204ENST00000502816 CCER1Q8TC90 406 aaPredicted RBP34.87■■■■□ 3.17
TRIO-204ENST00000502816 A0A1W2PP64 1363 aa34.86■■■■□ 3.17
TRIO-204ENST00000502816 COL5A2P05997 1499 aaPredicted RBP34.85■■■■□ 3.17
TRIO-204ENST00000502816 KRT27Q7Z3Y8 459 aa34.85■■■■□ 3.17
TRIO-204ENST00000502816 STRN4Q9NRL3 753 aa34.85■■■■□ 3.17
TRIO-204ENST00000502816 EVA1CP58658 441 aa34.84■■■■□ 3.17
TRIO-204ENST00000502816 TMF1P82094 1093 aa34.84■■■■□ 3.17
TRIO-204ENST00000502816 ARHGEF25Q86VW2 580 aa34.84■■■■□ 3.17
TRIO-204ENST00000502816 NFAT5O94916 1531 aa34.84■■■■□ 3.17
TRIO-204ENST00000502816 BARGINQ6ZT62 677 aa34.82■■■■□ 3.16
TRIO-204ENST00000502816 LARP1Q6PKG0 1096 aaKnown RBP34.81■■■■□ 3.16
TRIO-204ENST00000502816 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.8■■■■□ 3.164e-7■■■□□ 16.8
TRIO-204ENST00000502816 ABCC6O95255 1503 aa34.78■■■■□ 3.16
TRIO-204ENST00000502816 THRAP3Q9Y2W1 955 aaKnown RBP34.78■■■■□ 3.16
TRIO-204ENST00000502816 NME9Q86XW9 330 aa34.77■■■■□ 3.16
TRIO-204ENST00000502816 BLMP54132 1417 aaPredicted RBP34.77■■■■□ 3.16
TRIO-204ENST00000502816 CDCA8Q53HL2 280 aa34.76■■■■□ 3.16
TRIO-204ENST00000502816 ZRANB1Q9UGI0 708 aa34.76■■■■□ 3.16
TRIO-204ENST00000502816 CRB1P82279 1406 aa34.75■■■■□ 3.15
TRIO-204ENST00000502816 AXIN2Q9Y2T1 843 aa34.75■■■■□ 3.15
TRIO-204ENST00000502816 ANKRD36BQ8N2N9 1353 aa34.74■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms