RNA–Protein interactions for RNA: ENST00000502588.5

TNFRSF25-216, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-216ENST00000502588 BRWD3Q6RI45 1802 aa32.74■■■□□ 2.83
TNFRSF25-216ENST00000502588 GJD4Q96KN9 370 aaPredicted RBP32.74■■■□□ 2.83
TNFRSF25-216ENST00000502588 PAK3O75914 559 aaPredicted RBP32.73■■■□□ 2.83
TNFRSF25-216ENST00000502588 POLR3AO14802 1390 aaPredicted RBP32.71■■■□□ 2.83
TNFRSF25-216ENST00000502588 COL14A1Q05707 1796 aaKnown RBP32.71■■■□□ 2.83
TNFRSF25-216ENST00000502588 FAM83GA6ND36 823 aa32.7■■■□□ 2.83
TNFRSF25-216ENST00000502588 NBPF8Q3BBV2 869 aa32.7■■■□□ 2.83
TNFRSF25-216ENST00000502588 ACEP12821 1306 aa32.7■■■□□ 2.82
TNFRSF25-216ENST00000502588 CCDC61Q9Y6R9 512 aa32.69■■■□□ 2.82
TNFRSF25-216ENST00000502588 CABP2Q9NPB3 220 aa32.68■■■□□ 2.82
TNFRSF25-216ENST00000502588 ROCK2O75116 1388 aaKnown RBP32.68■■■□□ 2.82
TNFRSF25-216ENST00000502588 PPIP5K1Q6PFW1 1433 aa32.67■■■□□ 2.82
TNFRSF25-216ENST00000502588 SRPK2P78362 688 aaKnown RBP32.66■■■□□ 2.82
TNFRSF25-216ENST00000502588 PLEKHG3A1L390 1219 aa32.65■■■□□ 2.82
TNFRSF25-216ENST00000502588 TRIM26Q12899 539 aaPredicted RBP32.64■■■□□ 2.82
TNFRSF25-216ENST00000502588 ATAD2Q6PL18 1390 aa32.64■■■□□ 2.82
TNFRSF25-216ENST00000502588 NUTM2GQ5VZR2 741 aa32.63■■■□□ 2.81
TNFRSF25-216ENST00000502588 VPS72Q15906 364 aa32.62■■■□□ 2.81
TNFRSF25-216ENST00000502588 EP400Q96L91 3159 aa32.62■■■□□ 2.81
TNFRSF25-216ENST00000502588 NRKQ7Z2Y5 1582 aa32.6■■■□□ 2.81
TNFRSF25-216ENST00000502588 BTG4Q9NY30 223 aa32.58■■■□□ 2.81
TNFRSF25-216ENST00000502588 CCDC9Q9Y3X0 531 aaKnown RBP32.57■■■□□ 2.8
TNFRSF25-216ENST00000502588 KIAA0232Q92628 1395 aa32.55■■■□□ 2.8
TNFRSF25-216ENST00000502588 AKAP12Q02952 1782 aa32.54■■■□□ 2.8
TNFRSF25-216ENST00000502588 CABP1Q9NZU7 370 aa32.53■■■□□ 2.8
TNFRSF25-216ENST00000502588 TONSLQ96HA7 1378 aa32.53■■■□□ 2.8
TNFRSF25-216ENST00000502588 PRDM11Q9NQV5 511 aa32.52■■■□□ 2.8
TNFRSF25-216ENST00000502588 CHRNA2Q15822 529 aa32.51■■■□□ 2.79
TNFRSF25-216ENST00000502588 SEPT12Q8IYM1 358 aa32.51■■■□□ 2.79
TNFRSF25-216ENST00000502588 EVC2Q86UK5 1308 aa32.51■■■□□ 2.79
TNFRSF25-216ENST00000502588 PIK3C2AO00443 1686 aa32.5■■■□□ 2.79
TNFRSF25-216ENST00000502588 ZC3H6P61129 1189 aaKnown RBP32.5■■■□□ 2.79
TNFRSF25-216ENST00000502588 USP6P35125 1406 aa32.5■■■□□ 2.79
TNFRSF25-216ENST00000502588 ABTB2Q8N961 1025 aa32.49■■■□□ 2.79
TNFRSF25-216ENST00000502588 LMO7Q8WWI1 1683 aa32.47■■■□□ 2.79
TNFRSF25-216ENST00000502588 USP19O94966 1318 aa32.47■■■□□ 2.79
TNFRSF25-216ENST00000502588 ONECUT3O60422 494 aaPredicted RBP32.46■■■□□ 2.79
TNFRSF25-216ENST00000502588 THSD7AQ9UPZ6 1657 aa32.45■■■□□ 2.79
TNFRSF25-216ENST00000502588 SSH2Q76I76 1423 aa32.44■■■□□ 2.78
TNFRSF25-216ENST00000502588 FAM98CQ17RN3 349 aaKnown RBP32.44■■■□□ 2.78
TNFRSF25-216ENST00000502588 CARD11Q9BXL7 1154 aa32.44■■■□□ 2.78
TNFRSF25-216ENST00000502588 SPATA31A5Q5VU36 1347 aa32.43■■■□□ 2.78
TNFRSF25-216ENST00000502588 SPATA31A7Q8IWB4 1347 aa32.43■■■□□ 2.78
TNFRSF25-216ENST00000502588 CAMTA1Q9Y6Y1 1673 aa32.43■■■□□ 2.78
TNFRSF25-216ENST00000502588 MON2Q7Z3U7 1717 aa32.41■■■□□ 2.78
TNFRSF25-216ENST00000502588 SLIT3O75094 1523 aa32.4■■■□□ 2.78
TNFRSF25-216ENST00000502588 A0A0G2JS52 829 aa32.39■■■□□ 2.78
TNFRSF25-216ENST00000502588 MYT1Q01538 1121 aa32.39■■■□□ 2.78
TNFRSF25-216ENST00000502588 BRD4O60885 1362 aaPredicted RBP32.39■■■□□ 2.78
TNFRSF25-216ENST00000502588 SBNO2Q9Y2G9 1366 aa32.39■■■□□ 2.78
TNFRSF25-216ENST00000502588 STRN4Q9NRL3 753 aa32.38■■■□□ 2.77
TNFRSF25-216ENST00000502588 CPDO75976 1380 aa32.37■■■□□ 2.77
TNFRSF25-216ENST00000502588 NLRP13Q86W25 1043 aa32.37■■■□□ 2.77
TNFRSF25-216ENST00000502588 KRT27Q7Z3Y8 459 aa32.36■■■□□ 2.77
TNFRSF25-216ENST00000502588 GCP02774 474 aa32.35■■■□□ 2.77
TNFRSF25-216ENST00000502588 BLMP54132 1417 aaPredicted RBP32.34■■■□□ 2.77
TNFRSF25-216ENST00000502588 CPSF1Q10570 1443 aaKnown RBP32.34■■■□□ 2.77
TNFRSF25-216ENST00000502588 SPATA31A1Q5TZJ5 1347 aa32.33■■■□□ 2.77
TNFRSF25-216ENST00000502588 COL18A1P39060 1754 aa32.33■■■□□ 2.77
TNFRSF25-216ENST00000502588 NLRP6P59044 892 aa32.33■■■□□ 2.77
TNFRSF25-216ENST00000502588 RGPD5Q99666 1765 aa32.31■■■□□ 2.76
TNFRSF25-216ENST00000502588 TTC21BQ7Z4L5 1316 aa32.3■■■□□ 2.76
TNFRSF25-216ENST00000502588 CD163L1Q9NR16 1453 aa32.3■■■□□ 2.76
TNFRSF25-216ENST00000502588 FAM182BQ5T319 152 aa32.3■■■□□ 2.76
TNFRSF25-216ENST00000502588 CCDC125Q86Z20 511 aa32.3■■■□□ 2.76
TNFRSF25-216ENST00000502588 LARP1Q6PKG0 1096 aaKnown RBP32.28■■■□□ 2.76
TNFRSF25-216ENST00000502588 COL5A2P05997 1499 aaPredicted RBP32.28■■■□□ 2.76
TNFRSF25-216ENST00000502588 ZBTB7CA1YPR0 619 aa32.27■■■□□ 2.76
TNFRSF25-216ENST00000502588 USP35Q9P2H5 1018 aa32.27■■■□□ 2.76
TNFRSF25-216ENST00000502588 KTN1Q86UP2 1357 aaKnown RBP32.27■■■□□ 2.76
TNFRSF25-216ENST00000502588 DEFB132Q7Z7B7 95 aa32.26■■■□□ 2.75
TNFRSF25-216ENST00000502588 EVA1CP58658 441 aa32.25■■■□□ 2.75
TNFRSF25-216ENST00000502588 ZNF692Q9BU19 519 aaPredicted RBP32.25■■■□□ 2.75
TNFRSF25-216ENST00000502588 RGPD1P0DJD0 1748 aa32.24■■■□□ 2.75
TNFRSF25-216ENST00000502588 TNS1Q9HBL0 1735 aaKnown RBP32.24■■■□□ 2.75
TNFRSF25-216ENST00000502588 USP54Q70EL1 1684 aa32.24■■■□□ 2.75
TNFRSF25-216ENST00000502588 NFAT5O94916 1531 aa32.22■■■□□ 2.75
TNFRSF25-216ENST00000502588 TTC21AQ8NDW8 1320 aa32.21■■■□□ 2.75
TNFRSF25-216ENST00000502588 TESK2Q96S53 571 aa32.2■■■□□ 2.75
TNFRSF25-216ENST00000502588 ZRANB1Q9UGI0 708 aa32.2■■■□□ 2.75
TNFRSF25-216ENST00000502588 WNK3Q9BYP7 1800 aa32.2■■■□□ 2.75
TNFRSF25-216ENST00000502588 AATKQ6ZMQ8 1374 aa32.19■■■□□ 2.74
TNFRSF25-216ENST00000502588 ST20-MTHFSA0A0A6YYL1 179 aa32.19■■■□□ 2.74
TNFRSF25-216ENST00000502588 SOX12O15370 315 aa32.19■■■□□ 2.74
TNFRSF25-216ENST00000502588 TMC1Q8TDI8 760 aa32.19■■■□□ 2.74
TNFRSF25-216ENST00000502588 SLC12A5Q9H2X9 1139 aa32.19■■■□□ 2.74
TNFRSF25-216ENST00000502588 PARP4Q9UKK3 1724 aaKnown RBP32.18■■■□□ 2.74
TNFRSF25-216ENST00000502588 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.16■■■□□ 2.74
TNFRSF25-216ENST00000502588 LTN1O94822 1766 aa32.15■■■□□ 2.74
TNFRSF25-216ENST00000502588 BARGINQ6ZT62 677 aa32.15■■■□□ 2.74
TNFRSF25-216ENST00000502588 AXIN2Q9Y2T1 843 aa32.15■■■□□ 2.74
TNFRSF25-216ENST00000502588 SF3B2Q13435 895 aaKnown RBP32.14■■■□□ 2.74
TNFRSF25-216ENST00000502588 A0A1W2PP64 1363 aa32.14■■■□□ 2.74
TNFRSF25-216ENST00000502588 CRB1P82279 1406 aa32.14■■■□□ 2.74
TNFRSF25-216ENST00000502588 NME9Q86XW9 330 aa32.13■■■□□ 2.73
TNFRSF25-216ENST00000502588 TCP11L2Q8N4U5 519 aa32.13■■■□□ 2.73
TNFRSF25-216ENST00000502588 PCGF6Q9BYE7 350 aa32.13■■■□□ 2.73
TNFRSF25-216ENST00000502588 LRRC37A3O60309 1634 aa32.12■■■□□ 2.73
TNFRSF25-216ENST00000502588 ARHGEF25Q86VW2 580 aa32.12■■■□□ 2.73
TNFRSF25-216ENST00000502588 USP31Q70CQ4 1352 aa32.09■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms