RNA–Protein interactions for RNA: ENST00000502495.1

SCLT1-203, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 1,811 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-203ENST00000502495 SIAH2O43255 324 aa5.83□□□□□ -1.48
SCLT1-203ENST00000502495 MS4A1P11836 297 aa5.83□□□□□ -1.48
SCLT1-203ENST00000502495 PLEKHG3A1L390 1219 aa5.81□□□□□ -1.48
SCLT1-203ENST00000502495 IGHA1P01876 353 aa5.81□□□□□ -1.48
SCLT1-203ENST00000502495 SSTR3P32745 418 aaPredicted RBP5.81□□□□□ -1.48
SCLT1-203ENST00000502495 KRTAP4-8Q9BYQ9 185 aa5.81□□□□□ -1.48
SCLT1-203ENST00000502495 MRPL14Q6P1L8 145 aaKnown RBP5.8□□□□□ -1.48
SCLT1-203ENST00000502495 FAM217BQ9NTX9 383 aaPredicted RBP5.79□□□□□ -1.48
SCLT1-203ENST00000502495 JUNDP17535 347 aa5.78□□□□□ -1.48
SCLT1-203ENST00000502495 BEGAINQ9BUH8 593 aa5.78□□□□□ -1.48
SCLT1-203ENST00000502495 USP46P62068 366 aa5.78□□□□□ -1.48
SCLT1-203ENST00000502495 PURBQ96QR8 312 aaKnown RBP5.78□□□□□ -1.48
SCLT1-203ENST00000502495 KDM4AO75164 1064 aa5.77□□□□□ -1.49
SCLT1-203ENST00000502495 ADAMTS8Q9UP79 889 aa5.77□□□□□ -1.49
SCLT1-203ENST00000502495 DNMT3AQ9Y6K1 912 aaPredicted RBP5.77□□□□□ -1.49
SCLT1-203ENST00000502495 FOXK2Q01167 660 aa5.76□□□□□ -1.49
SCLT1-203ENST00000502495 TIMELESSQ9UNS1 1208 aa5.76□□□□□ -1.49
SCLT1-203ENST00000502495 MAN1A2O60476 641 aa5.76□□□□□ -1.49
SCLT1-203ENST00000502495 GPAT2Q6NUI2 795 aa5.76□□□□□ -1.49
SCLT1-203ENST00000502495 NUDT12Q9BQG2 462 aa5.76□□□□□ -1.49
SCLT1-203ENST00000502495 PPFIA3O75145 1194 aa5.75□□□□□ -1.49
SCLT1-203ENST00000502495 CD46P15529 392 aa5.75□□□□□ -1.49
SCLT1-203ENST00000502495 NNTQ13423 1086 aa5.75□□□□□ -1.49
SCLT1-203ENST00000502495 MPNDQ8N594 471 aa5.75□□□□□ -1.49
SCLT1-203ENST00000502495 ATP1B4Q9UN42 357 aaPredicted RBP5.75□□□□□ -1.49
SCLT1-203ENST00000502495 SOBPA7XYQ1 873 aa5.74□□□□□ -1.49
SCLT1-203ENST00000502495 ADH1CP00326 375 aa5.74□□□□□ -1.49
SCLT1-203ENST00000502495 SH3BP2P78314 561 aa5.74□□□□□ -1.49
SCLT1-203ENST00000502495 C14orf37Q86TY3 774 aa5.74□□□□□ -1.49
SCLT1-203ENST00000502495 KRTAP1-3Q8IUG1 177 aa5.74□□□□□ -1.49
SCLT1-203ENST00000502495 PCMTD1Q96MG8 357 aaPredicted RBP5.74□□□□□ -1.49
SCLT1-203ENST00000502495 RSPH6AQ9H0K4 717 aa5.74□□□□□ -1.49
SCLT1-203ENST00000502495 GOPCQ9HD26 462 aa5.74□□□□□ -1.49
SCLT1-203ENST00000502495 WDR4P57081 412 aaKnown RBP5.74□□□□□ -1.49
SCLT1-203ENST00000502495 XP32Q5T750 250 aa5.74□□□□□ -1.49
SCLT1-203ENST00000502495 PTCRAQ6ISU1 281 aaPredicted RBP5.74□□□□□ -1.49
SCLT1-203ENST00000502495 ERICH6Q7L0X2 663 aa5.74□□□□□ -1.49
SCLT1-203ENST00000502495 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.73□□□□□ -1.49
SCLT1-203ENST00000502495 TIMP2P16035 220 aa5.73□□□□□ -1.49
SCLT1-203ENST00000502495 VARSP26640 1264 aaKnown RBP5.73□□□□□ -1.49
SCLT1-203ENST00000502495 SH3D19Q5HYK7 790 aa5.73□□□□□ -1.49
SCLT1-203ENST00000502495 SKIV2LQ15477 1246 aaKnown RBP5.72□□□□□ -1.49
SCLT1-203ENST00000502495 KANK3Q6NY19 840 aa5.72□□□□□ -1.49
SCLT1-203ENST00000502495 ARXQ96QS3 562 aa5.72□□□□□ -1.49
SCLT1-203ENST00000502495 POLR3EQ9NVU0 708 aa5.72□□□□□ -1.49
SCLT1-203ENST00000502495 CNTNAP3BQ96NU0 1288 aa5.71□□□□□ -1.49
SCLT1-203ENST00000502495 TBC1D2Q9BYX2 928 aa5.71□□□□□ -1.49
SCLT1-203ENST00000502495 CNTNAP3Q9BZ76 1288 aa5.71□□□□□ -1.49
SCLT1-203ENST00000502495 TLL2Q9Y6L7 1015 aa5.71□□□□□ -1.49
SCLT1-203ENST00000502495 IRS1P35568 1242 aa5.71□□□□□ -1.5
SCLT1-203ENST00000502495 DIXDC1Q155Q3 683 aa5.71□□□□□ -1.5
SCLT1-203ENST00000502495 MYSM1Q5VVJ2 828 aa5.71□□□□□ -1.5
SCLT1-203ENST00000502495 RETREG3Q86VR2 466 aa5.71□□□□□ -1.5
SCLT1-203ENST00000502495 NUTM1Q86Y26 1132 aa5.71□□□□□ -1.5
SCLT1-203ENST00000502495 HOXA2O43364 376 aa5.7□□□□□ -1.5
SCLT1-203ENST00000502495 UPP2O95045 317 aa5.7□□□□□ -1.5
SCLT1-203ENST00000502495 CCNYL3P0C7X3 344 aa5.7□□□□□ -1.5
SCLT1-203ENST00000502495 MARSP56192 900 aaKnown RBP5.7□□□□□ -1.5
SCLT1-203ENST00000502495 SPIRE2Q8WWL2 714 aa5.7□□□□□ -1.5
SCLT1-203ENST00000502495 KRTAP9-2Q9BYQ4 174 aa5.7□□□□□ -1.5
SCLT1-203ENST00000502495 SVOPQ8N4V2 548 aa5.69□□□□□ -1.5
SCLT1-203ENST00000502495 PROCA1Q8NCQ7 364 aaPredicted RBP5.69□□□□□ -1.5
SCLT1-203ENST00000502495 KRTAP9-6A0A140TA67 174 aa5.69□□□□□ -1.5
SCLT1-203ENST00000502495 CLK2P49760 499 aaKnown RBP5.69□□□□□ -1.5
SCLT1-203ENST00000502495 C6orf118Q5T5N4 469 aa5.69□□□□□ -1.5
SCLT1-203ENST00000502495 HLA-CQ95604 372 aa5.69□□□□□ -1.5
SCLT1-203ENST00000502495 SCARF2Q96GP6 870 aaPredicted RBP5.69□□□□□ -1.5
SCLT1-203ENST00000502495 ZNF385CQ66K41 422 aaPredicted RBP5.68□□□□□ -1.5
SCLT1-203ENST00000502495 FAM174AQ8TBP5 190 aa5.68□□□□□ -1.5
SCLT1-203ENST00000502495 BAP1Q92560 729 aa5.68□□□□□ -1.5
SCLT1-203ENST00000502495 UNC93B1Q9H1C4 597 aa5.68□□□□□ -1.5
SCLT1-203ENST00000502495 BMP2P12643 396 aa5.67□□□□□ -1.5
SCLT1-203ENST00000502495 KRT76Q01546 638 aa5.67□□□□□ -1.5
SCLT1-203ENST00000502495 LINC01559Q495D7 138 aa5.67□□□□□ -1.5
SCLT1-203ENST00000502495 RIC3Q7Z5B4 369 aa5.67□□□□□ -1.5
SCLT1-203ENST00000502495 KLF16Q9BXK1 252 aaPredicted RBP5.67□□□□□ -1.5
SCLT1-203ENST00000502495 ZIC2O95409 532 aaPredicted RBP5.67□□□□□ -1.5
SCLT1-203ENST00000502495 PTPRNQ16849 979 aa5.67□□□□□ -1.5
SCLT1-203ENST00000502495 ZNF511Q8NB15 262 aa5.67□□□□□ -1.5
SCLT1-203ENST00000502495 COL25A1Q9BXS0 654 aaPredicted RBP5.67□□□□□ -1.5
SCLT1-203ENST00000502495 EVA1BQ9NVM1 165 aa5.67□□□□□ -1.5
SCLT1-203ENST00000502495 LIMD1Q9UGP4 676 aa5.67□□□□□ -1.5
SCLT1-203ENST00000502495 MOXD2PA6NHM9 499 aa5.66□□□□□ -1.5
SCLT1-203ENST00000502495 NDUFV2P19404 249 aa5.66□□□□□ -1.5
SCLT1-203ENST00000502495 CSPP1Q1MSJ5 1256 aa5.66□□□□□ -1.5
SCLT1-203ENST00000502495 GPR161Q8N6U8 529 aaKnown RBP5.66□□□□□ -1.5
SCLT1-203ENST00000502495 SYMPKQ92797 1274 aaKnown RBP5.66□□□□□ -1.5
SCLT1-203ENST00000502495 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.66□□□□□ -1.5
SCLT1-203ENST00000502495 KCNH2Q12809 1159 aa5.65□□□□□ -1.5
SCLT1-203ENST00000502495 SPTLC1O15269 473 aa5.64□□□□□ -1.51
SCLT1-203ENST00000502495 ADAM23O75077 832 aa5.64□□□□□ -1.51
SCLT1-203ENST00000502495 GUCA2AQ02747 115 aa5.64□□□□□ -1.51
SCLT1-203ENST00000502495 NR5A1Q13285 461 aa5.64□□□□□ -1.51
SCLT1-203ENST00000502495 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.64□□□□□ -1.51
SCLT1-203ENST00000502495 RSBN1LQ6PCB5 846 aaPredicted RBP5.64□□□□□ -1.51
SCLT1-203ENST00000502495 NANOS1Q8WY41 292 aaKnown RBP5.64□□□□□ -1.51
SCLT1-203ENST00000502495 SOS2Q07890 1332 aaPredicted RBP5.64□□□□□ -1.51
SCLT1-203ENST00000502495 MSTNO14793 375 aa5.64□□□□□ -1.51
SCLT1-203ENST00000502495 ARHGEF15O94989 841 aa5.64□□□□□ -1.51
SCLT1-203ENST00000502495 FLIIQ13045 1269 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms