RNA–Protein interactions for RNA: ENST00000502187.5

LINC01550-202, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,455 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-202ENST00000502187 KIF20BQ96Q89 1820 aa12.27□□□□□ -0.45
LINC01550-202ENST00000502187 MYBBP1AQ9BQG0 1328 aaKnown RBP12.27□□□□□ -0.45
LINC01550-202ENST00000502187 MON2Q7Z3U7 1717 aa12.27□□□□□ -0.45
LINC01550-202ENST00000502187 PRR36Q9H6K5 1346 aa12.26□□□□□ -0.45
LINC01550-202ENST00000502187 FBXO3Q9UK99 471 aa12.26□□□□□ -0.45
LINC01550-202ENST00000502187 CGNL1Q0VF96 1302 aa12.25□□□□□ -0.45
LINC01550-202ENST00000502187 ANKRD26Q9UPS8 1709 aa12.25□□□□□ -0.45
LINC01550-202ENST00000502187 ANKARQ7Z5J8 1434 aa12.25□□□□□ -0.45
LINC01550-202ENST00000502187 MAPK8IP2Q13387 824 aaPredicted RBP12.25□□□□□ -0.45
LINC01550-202ENST00000502187 KLHL34Q8N239 644 aa12.25□□□□□ -0.45
LINC01550-202ENST00000502187 VASPP50552 380 aaPredicted RBP12.25□□□□□ -0.45
LINC01550-202ENST00000502187 YTHDC1Q96MU7 727 aaKnown RBP12.25□□□□□ -0.45
LINC01550-202ENST00000502187 MRS2Q9HD23 443 aa12.25□□□□□ -0.45
LINC01550-202ENST00000502187 RNF216Q9NWF9 866 aaPredicted RBP12.24□□□□□ -0.45
LINC01550-202ENST00000502187 NSD2O96028 1365 aa12.24□□□□□ -0.45
LINC01550-202ENST00000502187 TMEM94Q12767 1356 aa12.24□□□□□ -0.45
LINC01550-202ENST00000502187 CPSF1Q10570 1443 aaKnown RBP12.23□□□□□ -0.45
LINC01550-202ENST00000502187 BRD4O60885 1362 aaPredicted RBP12.23□□□□□ -0.45
LINC01550-202ENST00000502187 CCDC184Q52MB2 194 aa12.22□□□□□ -0.45
LINC01550-202ENST00000502187 NLRP13Q86W25 1043 aa12.22□□□□□ -0.45
LINC01550-202ENST00000502187 C19orf44Q9H6X5 657 aa12.22□□□□□ -0.45
LINC01550-202ENST00000502187 NRKQ7Z2Y5 1582 aa12.21□□□□□ -0.45
LINC01550-202ENST00000502187 EDC4Q6P2E9 1401 aaKnown RBP12.21□□□□□ -0.45
LINC01550-202ENST00000502187 PLEKHG3A1L390 1219 aa12.21□□□□□ -0.45
LINC01550-202ENST00000502187 ATF3P18847 181 aa12.21□□□□□ -0.45
LINC01550-202ENST00000502187 NCOA3Q9Y6Q9 1424 aa12.21□□□□□ -0.46
LINC01550-202ENST00000502187 XIRP1Q702N8 1843 aaKnown RBP12.2□□□□□ -0.46
LINC01550-202ENST00000502187 MORC1Q86VD1 984 aa12.2□□□□□ -0.46
LINC01550-202ENST00000502187 ZNF692Q9BU19 519 aaPredicted RBP12.2□□□□□ -0.46
LINC01550-202ENST00000502187 ACEP12821 1306 aa12.19□□□□□ -0.46
LINC01550-202ENST00000502187 PMFBP1Q8TBY8 1022 aa12.19□□□□□ -0.46
LINC01550-202ENST00000502187 ATF5Q9Y2D1 282 aaPredicted RBP12.19□□□□□ -0.46
LINC01550-202ENST00000502187 PPP2R1AP30153 589 aa12.19□□□□□ -0.46
LINC01550-202ENST00000502187 USP6P35125 1406 aa12.18□□□□□ -0.46
LINC01550-202ENST00000502187 DCCP43146 1447 aa12.18□□□□□ -0.46
LINC01550-202ENST00000502187 ESCO1Q5FWF5 840 aa12.18□□□□□ -0.46
LINC01550-202ENST00000502187 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.18□□□□□ -0.46
LINC01550-202ENST00000502187 POLR3AO14802 1390 aaPredicted RBP12.18□□□□□ -0.46
LINC01550-202ENST00000502187 NGDNQ8NEJ9 315 aaKnown RBP12.17□□□□□ -0.46
LINC01550-202ENST00000502187 GGNBP2Q9H3C7 697 aa12.17□□□□□ -0.46
LINC01550-202ENST00000502187 LRRC7Q96NW7 1537 aa12.17□□□□□ -0.46
LINC01550-202ENST00000502187 MSH6P52701 1360 aa12.17□□□□□ -0.46
LINC01550-202ENST00000502187 FYB1O15117 783 aa12.17□□□□□ -0.46
LINC01550-202ENST00000502187 FAM9BQ8IZU0 186 aa12.17□□□□□ -0.46
LINC01550-202ENST00000502187 KIF1AQ12756 1690 aa12.16□□□□□ -0.46
LINC01550-202ENST00000502187 CADPS2Q86UW7 1296 aa12.16□□□□□ -0.46
LINC01550-202ENST00000502187 ORAI2Q96SN7 254 aa12.16□□□□□ -0.46
LINC01550-202ENST00000502187 PHF8Q9UPP1 1060 aa12.15□□□□□ -0.46
LINC01550-202ENST00000502187 TNNT2P45379 298 aaPredicted RBP12.15□□□□□ -0.46
LINC01550-202ENST00000502187 TTC21BQ7Z4L5 1316 aa12.14□□□□□ -0.47
LINC01550-202ENST00000502187 CENPBP07199 599 aaPredicted RBP12.14□□□□□ -0.47
LINC01550-202ENST00000502187 NME9Q86XW9 330 aa12.14□□□□□ -0.47
LINC01550-202ENST00000502187 C1orf167Q5SNV9 1468 aa12.13□□□□□ -0.47
LINC01550-202ENST00000502187 PNISRQ8TF01 805 aaKnown RBP12.13□□□□□ -0.47
LINC01550-202ENST00000502187 MST1RQ04912 1400 aa12.13□□□□□ -0.47
LINC01550-202ENST00000502187 SSH2Q76I76 1423 aa12.13□□□□□ -0.47
LINC01550-202ENST00000502187 TTC21AQ8NDW8 1320 aa12.13□□□□□ -0.47
LINC01550-202ENST00000502187 MAP2P11137 1827 aaKnown RBP12.13□□□□□ -0.47
LINC01550-202ENST00000502187 SLAIN2Q9P270 581 aa12.13□□□□□ -0.47
LINC01550-202ENST00000502187 FOXO3O43524 673 aa12.12□□□□□ -0.47
LINC01550-202ENST00000502187 PIK3C2AO00443 1686 aa12.12□□□□□ -0.47
LINC01550-202ENST00000502187 COG3Q96JB2 828 aa12.12□□□□□ -0.47
LINC01550-202ENST00000502187 PSME1Q06323 249 aa12.11□□□□□ -0.47
LINC01550-202ENST00000502187 OVOS2A0A0J9YW53 1432 aa12.11□□□□□ -0.47
LINC01550-202ENST00000502187 OVOS2Q6IE36 1432 aa12.11□□□□□ -0.47
LINC01550-202ENST00000502187 USP54Q70EL1 1684 aa12.11□□□□□ -0.47
LINC01550-202ENST00000502187 XPCQ01831 940 aaPredicted RBP12.1□□□□□ -0.47
LINC01550-202ENST00000502187 SPRYD3Q8NCJ5 442 aa12.1□□□□□ -0.47
LINC01550-202ENST00000502187 LTBP4Q8N2S1 1624 aa12.1□□□□□ -0.47
LINC01550-202ENST00000502187 PAK3O75914 559 aaPredicted RBP12.1□□□□□ -0.47
LINC01550-202ENST00000502187 HNRNPUQ00839 825 aaKnown RBP eCLIP12.1□□□□□ -0.47
LINC01550-202ENST00000502187 SHPRHQ149N8 1683 aa12.09□□□□□ -0.47
LINC01550-202ENST00000502187 MTHFSP49914 203 aa12.09□□□□□ -0.47
LINC01550-202ENST00000502187 WDR43Q15061 677 aaKnown RBP eCLIP12.09□□□□□ -0.47
LINC01550-202ENST00000502187 DDX17Q92841 729 aaKnown RBP12.09□□□□□ -0.47
LINC01550-202ENST00000502187 CFAP53Q96M91 514 aa12.09□□□□□ -0.47
LINC01550-202ENST00000502187 ZRANB1Q9UGI0 708 aa12.09□□□□□ -0.47
LINC01550-202ENST00000502187 NPM2Q86SE8 214 aaKnown RBP12.09□□□□□ -0.47
LINC01550-202ENST00000502187 MARF1Q9Y4F3 1742 aaKnown RBP12.08□□□□□ -0.48
LINC01550-202ENST00000502187 TRPM3Q9HCF6 1732 aaPredicted RBP12.08□□□□□ -0.48
LINC01550-202ENST00000502187 AATKQ6ZMQ8 1374 aa12.08□□□□□ -0.48
LINC01550-202ENST00000502187 USP31Q70CQ4 1352 aa12.08□□□□□ -0.48
LINC01550-202ENST00000502187 INSRP06213 1382 aa12.07□□□□□ -0.48
LINC01550-202ENST00000502187 PLEKHG5O94827 1062 aa12.06□□□□□ -0.48
LINC01550-202ENST00000502187 BRINP3Q76B58 766 aa12.06□□□□□ -0.48
LINC01550-202ENST00000502187 KRT28Q7Z3Y7 464 aa12.06□□□□□ -0.48
LINC01550-202ENST00000502187 NUTM2GQ5VZR2 741 aa12.06□□□□□ -0.48
LINC01550-202ENST00000502187 LMOD2Q6P5Q4 547 aa12.06□□□□□ -0.48
LINC01550-202ENST00000502187 SMG6Q86US8 1419 aaKnown RBP12.06□□□□□ -0.48
LINC01550-202ENST00000502187 PIP4K2BP78356 416 aa12.05□□□□□ -0.48
LINC01550-202ENST00000502187 ABTB2Q8N961 1025 aa12.05□□□□□ -0.48
LINC01550-202ENST00000502187 CERKQ8TCT0 537 aa12.05□□□□□ -0.48
LINC01550-202ENST00000502187 BLMP54132 1417 aaPredicted RBP12.05□□□□□ -0.48
LINC01550-202ENST00000502187 COL3A1P02461 1466 aaPredicted RBP12.05□□□□□ -0.48
LINC01550-202ENST00000502187 CDK12Q9NYV4 1490 aaPredicted RBP12.05□□□□□ -0.48
LINC01550-202ENST00000502187 UBAP1LF5GYI3 381 aa12.05□□□□□ -0.48
LINC01550-202ENST00000502187 TOM1O60784 492 aa12.05□□□□□ -0.48
LINC01550-202ENST00000502187 NLRP6P59044 892 aa12.04□□□□□ -0.48
LINC01550-202ENST00000502187 POLKQ9UBT6 870 aa12.04□□□□□ -0.48
LINC01550-202ENST00000502187 ALS2Q96Q42 1657 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms