RNA–Protein interactions for RNA: ENST00000500893.3

ZCCHC3-201, Transcript of zinc finger CCHC-type containing 3, humanhuman

APPRIS P1 BASIC

Gene ZCCHC3, Length 3,354 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3-201ENST00000500893 FOXD4L1Q9NU39 408 aa20.91■□□□□ 0.94
ZCCHC3-201ENST00000500893 NINLQ9Y2I6 1382 aa20.91■□□□□ 0.94
ZCCHC3-201ENST00000500893 RRS1Q15050 365 aaKnown RBP20.9■□□□□ 0.94
ZCCHC3-201ENST00000500893 CCDC27Q2M243 656 aa20.9■□□□□ 0.94
ZCCHC3-201ENST00000500893 TXNDC2Q86VQ3 553 aa20.9■□□□□ 0.94
ZCCHC3-201ENST00000500893 PHACTR3Q96KR7 559 aa20.9■□□□□ 0.94
ZCCHC3-201ENST00000500893 PHF23Q9BUL5 403 aaPredicted RBP20.9■□□□□ 0.94
ZCCHC3-201ENST00000500893 TBC1D2Q9BYX2 928 aa20.9■□□□□ 0.94
ZCCHC3-201ENST00000500893 ADGRB3O60242 1522 aa20.9■□□□□ 0.94
ZCCHC3-201ENST00000500893 YEATS2Q9ULM3 1422 aa20.9■□□□□ 0.94
ZCCHC3-201ENST00000500893 DCTN1Q14203 1278 aa20.89■□□□□ 0.93
ZCCHC3-201ENST00000500893 ANKRD45Q5TZF3 282 aa20.89■□□□□ 0.93
ZCCHC3-201ENST00000500893 C22orf23Q9BZE7 217 aa20.89■□□□□ 0.93
ZCCHC3-201ENST00000500893 IPO8O15397 1037 aaKnown RBP20.88■□□□□ 0.93
ZCCHC3-201ENST00000500893 NME9Q86XW9 330 aa20.88■□□□□ 0.93
ZCCHC3-201ENST00000500893 PLEKHF1Q96S99 279 aa20.88■□□□□ 0.93
ZCCHC3-201ENST00000500893 QRICH2Q9H0J4 1663 aa20.87■□□□□ 0.93
ZCCHC3-201ENST00000500893 HSP90AA1P07900 732 aaKnown RBP20.86■□□□□ 0.93
ZCCHC3-201ENST00000500893 TBC1D32Q96NH3 1257 aa20.86■□□□□ 0.93
ZCCHC3-201ENST00000500893 FAM83GA6ND36 823 aa20.85■□□□□ 0.93
ZCCHC3-201ENST00000500893 TSPYL6Q8N831 410 aa20.85■□□□□ 0.93
ZCCHC3-201ENST00000500893 NRXN1Q9ULB1 1477 aa20.85■□□□□ 0.93
ZCCHC3-201ENST00000500893 ANO8Q9HCE9 1232 aaPredicted RBP20.85■□□□□ 0.93
ZCCHC3-201ENST00000500893 ABCC3O15438 1527 aa20.85■□□□□ 0.93
ZCCHC3-201ENST00000500893 ADGRB1O14514 1584 aa20.85■□□□□ 0.93
ZCCHC3-201ENST00000500893 TULP4Q9NRJ4 1543 aa20.84■□□□□ 0.93
ZCCHC3-201ENST00000500893 ATAD2Q6PL18 1390 aa20.84■□□□□ 0.93
ZCCHC3-201ENST00000500893 POLKQ9UBT6 870 aa20.83■□□□□ 0.93
ZCCHC3-201ENST00000500893 PNNQ9H307 717 aaKnown RBP20.83■□□□□ 0.93
ZCCHC3-201ENST00000500893 KIAA1210Q9ULL0 1709 aa20.83■□□□□ 0.93
ZCCHC3-201ENST00000500893 PLEKHG5O94827 1062 aa20.82■□□□□ 0.92
ZCCHC3-201ENST00000500893 ABCC11Q96J66 1382 aa20.82■□□□□ 0.92
ZCCHC3-201ENST00000500893 MLH3Q9UHC1 1453 aa20.81■□□□□ 0.92
ZCCHC3-201ENST00000500893 GLI2P10070 1586 aa20.81■□□□□ 0.92
ZCCHC3-201ENST00000500893 EIF5BO60841 1220 aaKnown RBP20.81■□□□□ 0.92
ZCCHC3-201ENST00000500893 NSD2O96028 1365 aa20.81■□□□□ 0.92
ZCCHC3-201ENST00000500893 KIF16BQ96L93 1317 aa20.8■□□□□ 0.92
ZCCHC3-201ENST00000500893 HSCBQ8IWL3 235 aa20.8■□□□□ 0.92
ZCCHC3-201ENST00000500893 FRMPD1Q5SYB0 1578 aa20.8■□□□□ 0.92
ZCCHC3-201ENST00000500893 YTHDC2Q9H6S0 1430 aaKnown RBP20.79■□□□□ 0.92
ZCCHC3-201ENST00000500893 FCHSD2O94868 740 aa20.79■□□□□ 0.92
ZCCHC3-201ENST00000500893 AAMPQ13685 434 aa20.79■□□□□ 0.92
ZCCHC3-201ENST00000500893 IQSEC2Q5JU85 1478 aa20.78■□□□□ 0.92
ZCCHC3-201ENST00000500893 COG3Q96JB2 828 aa20.77■□□□□ 0.92
ZCCHC3-201ENST00000500893 ZBTB40Q9NUA8 1239 aa20.77■□□□□ 0.92
ZCCHC3-201ENST00000500893 HECW2Q9P2P5 1572 aa20.77■□□□□ 0.91
ZCCHC3-201ENST00000500893 LMTK2Q8IWU2 1503 aa20.76■□□□□ 0.91
ZCCHC3-201ENST00000500893 SETBP1Q9Y6X0 1596 aa20.76■□□□□ 0.91
ZCCHC3-201ENST00000500893 HSP90AB1P08238 724 aaKnown RBP20.76■□□□□ 0.91
ZCCHC3-201ENST00000500893 KRT24Q2M2I5 525 aa20.76■□□□□ 0.91
ZCCHC3-201ENST00000500893 RSPH6AQ9H0K4 717 aa20.76■□□□□ 0.91
ZCCHC3-201ENST00000500893 NFE2L2Q16236 605 aa20.75■□□□□ 0.91
ZCCHC3-201ENST00000500893 TWISTNBQ3B726 338 aaPredicted RBP20.75■□□□□ 0.91
ZCCHC3-201ENST00000500893 CT47B1P0C2W7 299 aaPredicted RBP20.75■□□□□ 0.91
ZCCHC3-201ENST00000500893 CHD1LQ86WJ1 897 aa20.75■□□□□ 0.91
ZCCHC3-201ENST00000500893 PUS7Q96PZ0 661 aaKnown RBP20.74■□□□□ 0.91
ZCCHC3-201ENST00000500893 MBIPQ9NS73 344 aa20.74■□□□□ 0.91
ZCCHC3-201ENST00000500893 SHPRHQ149N8 1683 aa20.74■□□□□ 0.91
ZCCHC3-201ENST00000500893 HDAC1Q13547 482 aaPredicted RBP20.73■□□□□ 0.91
ZCCHC3-201ENST00000500893 C8orf58Q8NAV2 365 aa20.73■□□□□ 0.91
ZCCHC3-201ENST00000500893 AEBP1Q8IUX7 1158 aa20.72■□□□□ 0.91
ZCCHC3-201ENST00000500893 NUDT16Q96DE0 195 aaKnown RBP20.72■□□□□ 0.91
ZCCHC3-201ENST00000500893 MIS18AQ9NYP9 233 aa20.72■□□□□ 0.91
ZCCHC3-201ENST00000500893 PPLO60437 1756 aa20.72■□□□□ 0.91
ZCCHC3-201ENST00000500893 SULT6B1Q6IMI4 303 aa20.71■□□□□ 0.91
ZCCHC3-201ENST00000500893 VAMP4O75379 141 aa20.71■□□□□ 0.91
ZCCHC3-201ENST00000500893 CAMSAP1Q5T5Y3 1602 aa20.71■□□□□ 0.91
ZCCHC3-201ENST00000500893 GNAI1P63096 354 aa20.71■□□□□ 0.91
ZCCHC3-201ENST00000500893 MCM10Q7L590 875 aa20.71■□□□□ 0.91
ZCCHC3-201ENST00000500893 SMC5Q8IY18 1101 aa20.71■□□□□ 0.91
ZCCHC3-201ENST00000500893 NEXMIFQ5QGS0 1516 aa20.7■□□□□ 0.9
ZCCHC3-201ENST00000500893 IFT172Q9UG01 1749 aa20.69■□□□□ 0.9
ZCCHC3-201ENST00000500893 WASLO00401 505 aaPredicted RBP20.69■□□□□ 0.9
ZCCHC3-201ENST00000500893 SLC4A10Q6U841 1118 aa20.69■□□□□ 0.9
ZCCHC3-201ENST00000500893 RBM42Q9BTD8 480 aaKnown RBP20.68■□□□□ 0.9
ZCCHC3-201ENST00000500893 NUCB1Q02818 461 aa20.68■□□□□ 0.9
ZCCHC3-201ENST00000500893 NECTIN2Q92692 538 aa20.68■□□□□ 0.9
ZCCHC3-201ENST00000500893 ANTXR1Q9H6X2 564 aa20.68■□□□□ 0.9
ZCCHC3-201ENST00000500893 MYO3AQ8NEV4 1616 aa20.67■□□□□ 0.9
ZCCHC3-201ENST00000500893 IL16Q14005 1332 aa20.67■□□□□ 0.9
ZCCHC3-201ENST00000500893 CALD1Q05682 793 aaKnown RBP20.67■□□□□ 0.9
ZCCHC3-201ENST00000500893 CHMP5Q9NZZ3 219 aa20.67■□□□□ 0.9
ZCCHC3-201ENST00000500893 MCM4P33991 863 aa20.66■□□□□ 0.9
ZCCHC3-201ENST00000500893 MRPL50Q8N5N7 158 aaKnown RBP20.66■□□□□ 0.9
ZCCHC3-201ENST00000500893 SIGLEC1Q9BZZ2 1709 aa20.66■□□□□ 0.9
ZCCHC3-201ENST00000500893 ALDH1L2Q3SY69 923 aa20.66■□□□□ 0.9
ZCCHC3-201ENST00000500893 NEURL4Q96JN8 1562 aa20.66■□□□□ 0.9
ZCCHC3-201ENST00000500893 ZBTB7BO15156 539 aaPredicted RBP20.65■□□□□ 0.9
ZCCHC3-201ENST00000500893 SLC26A8Q96RN1 970 aa20.65■□□□□ 0.9
ZCCHC3-201ENST00000500893 CCDC61Q9Y6R9 512 aa20.65■□□□□ 0.9
ZCCHC3-201ENST00000500893 C16orf71Q8IYS4 520 aaPredicted RBP20.64■□□□□ 0.89
ZCCHC3-201ENST00000500893 IL13P35225 146 aa20.64■□□□□ 0.89
ZCCHC3-201ENST00000500893 NUTM2GQ5VZR2 741 aa20.64■□□□□ 0.89
ZCCHC3-201ENST00000500893 PTPRMP28827 1452 aa20.63■□□□□ 0.89
ZCCHC3-201ENST00000500893 C14orf37Q86TY3 774 aa20.63■□□□□ 0.89
ZCCHC3-201ENST00000500893 PPIP5K1Q6PFW1 1433 aa20.63■□□□□ 0.89
ZCCHC3-201ENST00000500893 ZBTB7CA1YPR0 619 aa20.62■□□□□ 0.89
ZCCHC3-201ENST00000500893 GOLGA6L3A6NEY3 463 aa20.62■□□□□ 0.89
ZCCHC3-201ENST00000500893 TRAK2O60296 914 aa20.62■□□□□ 0.89
ZCCHC3-201ENST00000500893 SMARCA5O60264 1052 aaPredicted RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms