RNA–Protein interactions for RNA: ENST00000499786.4

MED28-202, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-202ENST00000499786 POTEB3A0JP26 581 aa9.8□□□□□ -0.84
MED28-202ENST00000499786 EIF4G2P78344 907 aaKnown RBP eCLIP9.8□□□□□ -0.84
MED28-202ENST00000499786 POTEBQ6S5H4 581 aa9.8□□□□□ -0.84
MED28-202ENST00000499786 ZDHHC16Q969W1 377 aa9.8□□□□□ -0.84
MED28-202ENST00000499786 ABCC3O15438 1527 aa9.8□□□□□ -0.84
MED28-202ENST00000499786 UHRF1BP1Q6BDS2 1440 aa9.8□□□□□ -0.84
MED28-202ENST00000499786 CLTCL1P53675 1640 aa9.79□□□□□ -0.84
MED28-202ENST00000499786 GPR37O15354 613 aa9.79□□□□□ -0.84
MED28-202ENST00000499786 ADAM33Q9BZ11 813 aa9.79□□□□□ -0.84
MED28-202ENST00000499786 PTPRTO14522 1441 aa9.79□□□□□ -0.84
MED28-202ENST00000499786 YEATS2Q9ULM3 1422 aa9.79□□□□□ -0.84
MED28-202ENST00000499786 KIF1BO60333 1816 aa9.79□□□□□ -0.84
MED28-202ENST00000499786 PLA2R1Q13018 1463 aa9.79□□□□□ -0.84
MED28-202ENST00000499786 GGT6Q6P531 493 aa9.78□□□□□ -0.84
MED28-202ENST00000499786 NEURL4Q96JN8 1562 aa9.78□□□□□ -0.84
MED28-202ENST00000499786 CNTLNQ9NXG0 1405 aa9.77□□□□□ -0.85
MED28-202ENST00000499786 EMP3P54852 163 aa9.77□□□□□ -0.85
MED28-202ENST00000499786 ZC3H15Q8WU90 426 aaKnown RBP9.77□□□□□ -0.85
MED28-202ENST00000499786 BCL2L12Q9HB09 334 aa9.77□□□□□ -0.85
MED28-202ENST00000499786 NPDC1Q9NQX5 325 aaPredicted RBP9.77□□□□□ -0.85
MED28-202ENST00000499786 ERBB3P21860 1342 aa9.77□□□□□ -0.85
MED28-202ENST00000499786 WASHC2CQ9Y4E1 1318 aa9.77□□□□□ -0.85
MED28-202ENST00000499786 AGLP35573 1532 aa9.77□□□□□ -0.85
MED28-202ENST00000499786 PPP4R3BQ5MIZ7 849 aa9.76□□□□□ -0.85
MED28-202ENST00000499786 VARS2Q5ST30 1063 aaKnown RBP9.76□□□□□ -0.85
MED28-202ENST00000499786 C6orf132Q5T0Z8 1188 aa9.76□□□□□ -0.85
MED28-202ENST00000499786 DCAF11Q8TEB1 546 aa9.76□□□□□ -0.85
MED28-202ENST00000499786 POLR1AO95602 1720 aaPredicted RBP9.76□□□□□ -0.85
MED28-202ENST00000499786 ROCK2O75116 1388 aaKnown RBP9.75□□□□□ -0.85
MED28-202ENST00000499786 LAMC1P11047 1609 aa9.75□□□□□ -0.85
MED28-202ENST00000499786 TRPM1Q7Z4N2 1603 aa9.75□□□□□ -0.85
MED28-202ENST00000499786 PRAG1Q86YV5 1406 aa9.75□□□□□ -0.85
MED28-202ENST00000499786 HSPA5P11021 654 aaKnown RBP9.75□□□□□ -0.85
MED28-202ENST00000499786 TSR1Q2NL82 804 aaKnown RBP9.75□□□□□ -0.85
MED28-202ENST00000499786 NBPF8Q3BBV2 869 aa9.75□□□□□ -0.85
MED28-202ENST00000499786 POTEEQ6S8J3 1075 aa9.75□□□□□ -0.85
MED28-202ENST00000499786 RBM33Q96EV2 1170 aaKnown RBP9.75□□□□□ -0.85
MED28-202ENST00000499786 USP47Q96K76 1375 aa9.75□□□□□ -0.85
MED28-202ENST00000499786 FAM205CA6NFA0 338 aa9.74□□□□□ -0.85
MED28-202ENST00000499786 PTGDRQ13258 359 aa9.74□□□□□ -0.85
MED28-202ENST00000499786 RGL3Q3MIN7 710 aa9.74□□□□□ -0.85
MED28-202ENST00000499786 STAC3Q96MF2 364 aa9.74□□□□□ -0.85
MED28-202ENST00000499786 CDHR5Q9HBB8 845 aa9.74□□□□□ -0.85
MED28-202ENST00000499786 NPATQ14207 1427 aa9.73□□□□□ -0.85
MED28-202ENST00000499786 SPATA31E1Q6ZUB1 1445 aa9.73□□□□□ -0.85
MED28-202ENST00000499786 MAP3K7O43318 606 aa9.73□□□□□ -0.85
MED28-202ENST00000499786 GPIHBP1Q8IV16 184 aa9.73□□□□□ -0.85
MED28-202ENST00000499786 HS3ST6Q96QI5 342 aa9.73□□□□□ -0.85
MED28-202ENST00000499786 CARD11Q9BXL7 1154 aa9.73□□□□□ -0.85
MED28-202ENST00000499786 MADDQ8WXG6 1647 aa9.73□□□□□ -0.85
MED28-202ENST00000499786 ARHGAP31Q2M1Z3 1444 aa9.73□□□□□ -0.85
MED28-202ENST00000499786 ADGRB3O60242 1522 aa9.72□□□□□ -0.85
MED28-202ENST00000499786 ZMYND10O75800 440 aa9.72□□□□□ -0.85
MED28-202ENST00000499786 TPRNQ4KMQ1 711 aa9.72□□□□□ -0.85
MED28-202ENST00000499786 ZNF687Q8N1G0 1237 aa9.72□□□□□ -0.85
MED28-202ENST00000499786 HIRIP3Q9BW71 556 aaPredicted RBP9.72□□□□□ -0.85
MED28-202ENST00000499786 MYOM2P54296 1465 aa9.72□□□□□ -0.85
MED28-202ENST00000499786 MROH2AA6NES4 1674 aa9.71□□□□□ -0.85
MED28-202ENST00000499786 NUTM2FA1L443 756 aa9.71□□□□□ -0.86
MED28-202ENST00000499786 PRKCSHP14314 528 aaPredicted RBP9.71□□□□□ -0.86
MED28-202ENST00000499786 ESF1Q9H501 851 aaKnown RBP9.71□□□□□ -0.86
MED28-202ENST00000499786 UGGT1Q9NYU2 1555 aa9.71□□□□□ -0.86
MED28-202ENST00000499786 PREX1Q8TCU6 1659 aa9.71□□□□□ -0.86
MED28-202ENST00000499786 DDX10Q13206 875 aaKnown RBP9.7□□□□□ -0.86
MED28-202ENST00000499786 CLTCQ00610 1675 aaKnown RBP9.7□□□□□ -0.86
MED28-202ENST00000499786 IFT172Q9UG01 1749 aa9.7□□□□□ -0.86
MED28-202ENST00000499786 KIAA1210Q9ULL0 1709 aa9.7□□□□□ -0.86
MED28-202ENST00000499786 PIK3C2BO00750 1634 aa9.69□□□□□ -0.86
MED28-202ENST00000499786 FCHSD2O94868 740 aa9.69□□□□□ -0.86
MED28-202ENST00000499786 COL9A1P20849 921 aa9.69□□□□□ -0.86
MED28-202ENST00000499786 NOS1P29475 1434 aa9.69□□□□□ -0.86
MED28-202ENST00000499786 EIF3AQ14152 1382 aaKnown RBP9.69□□□□□ -0.86
MED28-202ENST00000499786 BARGINQ6ZT62 677 aa9.69□□□□□ -0.86
MED28-202ENST00000499786 SYNMO15061 1565 aa9.68□□□□□ -0.86
MED28-202ENST00000499786 GPRASP1Q5JY77 1395 aa9.68□□□□□ -0.86
MED28-202ENST00000499786 ANP32CO43423 234 aa9.68□□□□□ -0.86
MED28-202ENST00000499786 CFAP65Q6ZU64 1925 aaKnown RBP9.68□□□□□ -0.86
MED28-202ENST00000499786 SIGLEC1Q9BZZ2 1709 aa9.68□□□□□ -0.86
MED28-202ENST00000499786 CCDC7Q96M83 1385 aa9.67□□□□□ -0.86
MED28-202ENST00000499786 ARID4BQ4LE39 1312 aaPredicted RBP9.67□□□□□ -0.86
MED28-202ENST00000499786 CENPBP07199 599 aaPredicted RBP9.67□□□□□ -0.86
MED28-202ENST00000499786 PTPREP23469 700 aa9.67□□□□□ -0.86
MED28-202ENST00000499786 HIC1Q14526 733 aa9.67□□□□□ -0.86
MED28-202ENST00000499786 TTC13Q8NBP0 860 aa9.67□□□□□ -0.86
MED28-202ENST00000499786 CERKQ8TCT0 537 aa9.67□□□□□ -0.86
MED28-202ENST00000499786 PLSCR2Q9NRY7 297 aa9.67□□□□□ -0.86
MED28-202ENST00000499786 PPLO60437 1756 aa9.67□□□□□ -0.86
MED28-202ENST00000499786 ERVK-7P63135 1459 aa9.66□□□□□ -0.86
MED28-202ENST00000499786 COL17A1Q9UMD9 1497 aaPredicted RBP9.66□□□□□ -0.86
MED28-202ENST00000499786 RPGRIP1LQ68CZ1 1315 aa9.66□□□□□ -0.86
MED28-202ENST00000499786 ARHGAP33O14559 1287 aa9.66□□□□□ -0.86
MED28-202ENST00000499786 PBX2P40425 430 aa9.66□□□□□ -0.86
MED28-202ENST00000499786 IQGAP1P46940 1657 aa9.65□□□□□ -0.86
MED28-202ENST00000499786 WASHC2AQ641Q2 1341 aa9.65□□□□□ -0.86
MED28-202ENST00000499786 PPP1R3GB7ZBB8 358 aa9.65□□□□□ -0.86
MED28-202ENST00000499786 GNPATO15228 680 aa9.65□□□□□ -0.86
MED28-202ENST00000499786 FECHP22830 423 aa9.65□□□□□ -0.86
MED28-202ENST00000499786 PSEN2P49810 448 aa9.65□□□□□ -0.86
MED28-202ENST00000499786 SLC52A1Q9NWF4 448 aa9.65□□□□□ -0.86
MED28-202ENST00000499786 MLECQ14165 292 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms