RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 PIK3C2AO00443 1686 aa26.82■■□□□ 1.88
LINC01550-201ENST00000499006 KRT28Q7Z3Y7 464 aa26.81■■□□□ 1.88
LINC01550-201ENST00000499006 KNSTRNQ9Y448 316 aa26.81■■□□□ 1.88
LINC01550-201ENST00000499006 TTC21BQ7Z4L5 1316 aa26.81■■□□□ 1.88
LINC01550-201ENST00000499006 AMER1Q5JTC6 1135 aaPredicted RBP26.81■■□□□ 1.88
LINC01550-201ENST00000499006 SOS2Q07890 1332 aaPredicted RBP26.8■■□□□ 1.88
LINC01550-201ENST00000499006 USP54Q70EL1 1684 aa26.8■■□□□ 1.88
LINC01550-201ENST00000499006 PIP4K2BP78356 416 aa26.8■■□□□ 1.88
LINC01550-201ENST00000499006 PHLPP1O60346 1717 aa26.8■■□□□ 1.88
LINC01550-201ENST00000499006 MARF1Q9Y4F3 1742 aaKnown RBP26.79■■□□□ 1.88
LINC01550-201ENST00000499006 XPCQ01831 940 aaPredicted RBP26.79■■□□□ 1.88
LINC01550-201ENST00000499006 NPC1L1Q9UHC9 1359 aa26.79■■□□□ 1.88
LINC01550-201ENST00000499006 CGNL1Q0VF96 1302 aa26.78■■□□□ 1.88
LINC01550-201ENST00000499006 TTC21AQ8NDW8 1320 aa26.78■■□□□ 1.88
LINC01550-201ENST00000499006 SBNO1A3KN83 1393 aa26.77■■□□□ 1.88
LINC01550-201ENST00000499006 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.77■■□□□ 1.88
LINC01550-201ENST00000499006 COL16A1Q07092 1604 aaPredicted RBP26.76■■□□□ 1.87
LINC01550-201ENST00000499006 FYB1O15117 783 aa26.75■■□□□ 1.87
LINC01550-201ENST00000499006 DIEXFQ68CQ4 756 aaKnown RBP26.74■■□□□ 1.87
LINC01550-201ENST00000499006 NSD2O96028 1365 aa26.74■■□□□ 1.87
LINC01550-201ENST00000499006 SCAF1Q9H7N4 1312 aaKnown RBP26.73■■□□□ 1.87
LINC01550-201ENST00000499006 TNS3Q68CZ2 1445 aa26.73■■□□□ 1.87
LINC01550-201ENST00000499006 NME9Q86XW9 330 aa26.73■■□□□ 1.87
LINC01550-201ENST00000499006 PAK3O75914 559 aaPredicted RBP26.72■■□□□ 1.87
LINC01550-201ENST00000499006 SPATA31A3Q5VYP0 1347 aa26.71■■□□□ 1.87
LINC01550-201ENST00000499006 USP31Q70CQ4 1352 aa26.7■■□□□ 1.86
LINC01550-201ENST00000499006 CRYBG1Q9Y4K1 1723 aa26.69■■□□□ 1.86
LINC01550-201ENST00000499006 OVOS2A0A0J9YW53 1432 aa26.69■■□□□ 1.86
LINC01550-201ENST00000499006 OVOS2Q6IE36 1432 aa26.69■■□□□ 1.86
LINC01550-201ENST00000499006 CC2D1BQ5T0F9 858 aaKnown RBP26.68■■□□□ 1.86
LINC01550-201ENST00000499006 ABTB2Q8N961 1025 aa26.68■■□□□ 1.86
LINC01550-201ENST00000499006 GGNBP2Q9H3C7 697 aa26.68■■□□□ 1.86
LINC01550-201ENST00000499006 ZRANB1Q9UGI0 708 aa26.68■■□□□ 1.86
LINC01550-201ENST00000499006 MED1Q15648 1581 aaPredicted RBP26.65■■□□□ 1.86
LINC01550-201ENST00000499006 ARHGEF10O15013 1369 aa26.65■■□□□ 1.86
LINC01550-201ENST00000499006 PARD3Q8TEW0 1356 aa26.65■■□□□ 1.86
LINC01550-201ENST00000499006 MAP2P11137 1827 aaKnown RBP26.64■■□□□ 1.86
LINC01550-201ENST00000499006 COL22A1Q8NFW1 1626 aaPredicted RBP26.64■■□□□ 1.86
LINC01550-201ENST00000499006 NLRP6P59044 892 aa26.63■■□□□ 1.85
LINC01550-201ENST00000499006 LRRC59Q96AG4 307 aaKnown RBP26.63■■□□□ 1.85
LINC01550-201ENST00000499006 PRKRIP1Q9H875 184 aaPredicted RBP26.63■■□□□ 1.85
LINC01550-201ENST00000499006 ABCA3Q99758 1704 aa26.63■■□□□ 1.85
LINC01550-201ENST00000499006 PHRF1Q9P1Y6 1649 aaKnown RBP26.63■■□□□ 1.85
LINC01550-201ENST00000499006 COG3Q96JB2 828 aa26.62■■□□□ 1.85
LINC01550-201ENST00000499006 SLIT3O75094 1523 aa26.62■■□□□ 1.85
LINC01550-201ENST00000499006 CNGB1Q14028 1251 aaPredicted RBP26.62■■□□□ 1.85
LINC01550-201ENST00000499006 NUTM2GQ5VZR2 741 aa26.62■■□□□ 1.85
LINC01550-201ENST00000499006 LMOD2Q6P5Q4 547 aa26.61■■□□□ 1.85
LINC01550-201ENST00000499006 NLRP13Q86W25 1043 aa26.61■■□□□ 1.85
LINC01550-201ENST00000499006 SHPRHQ149N8 1683 aa26.6■■□□□ 1.85
LINC01550-201ENST00000499006 USP19O94966 1318 aa26.6■■□□□ 1.85
LINC01550-201ENST00000499006 ANP32CO43423 234 aa26.6■■□□□ 1.85
LINC01550-201ENST00000499006 RALBP1Q15311 655 aa26.59■■□□□ 1.85
LINC01550-201ENST00000499006 MORC1Q86VD1 984 aa26.59■■□□□ 1.85
LINC01550-201ENST00000499006 PNPLA6Q8IY17 1366 aa26.57■■□□□ 1.84
LINC01550-201ENST00000499006 NFAT5O94916 1531 aa26.57■■□□□ 1.84
LINC01550-201ENST00000499006 LTN1O94822 1766 aa26.56■■□□□ 1.84
LINC01550-201ENST00000499006 HSPA1LP34931 641 aa26.54■■□□□ 1.84
LINC01550-201ENST00000499006 AATKQ6ZMQ8 1374 aa26.53■■□□□ 1.84
LINC01550-201ENST00000499006 FBXO41Q8TF61 875 aa26.52■■□□□ 1.84
LINC01550-201ENST00000499006 TNNT2P45379 298 aaPredicted RBP26.51■■□□□ 1.83
LINC01550-201ENST00000499006 GCP02774 474 aa26.5■■□□□ 1.83
LINC01550-201ENST00000499006 KCNH5Q8NCM2 988 aa26.5■■□□□ 1.83
LINC01550-201ENST00000499006 FBLN1P23142 703 aa26.49■■□□□ 1.83
LINC01550-201ENST00000499006 PPP2R1AP30153 589 aa26.49■■□□□ 1.83
LINC01550-201ENST00000499006 CABLES1Q8TDN4 633 aa26.49■■□□□ 1.83
LINC01550-201ENST00000499006 MYBBP1AQ9BQG0 1328 aaKnown RBP26.49■■□□□ 1.83
LINC01550-201ENST00000499006 JCADQ9P266 1359 aa26.49■■□□□ 1.83
LINC01550-201ENST00000499006 PEAK1Q9H792 1746 aa26.48■■□□□ 1.83
LINC01550-201ENST00000499006 SMG6Q86US8 1419 aaKnown RBP26.47■■□□□ 1.83
LINC01550-201ENST00000499006 MIER1Q8N108 512 aa26.47■■□□□ 1.83
LINC01550-201ENST00000499006 SOX12O15370 315 aa26.45■■□□□ 1.82
LINC01550-201ENST00000499006 PLEKHG5O94827 1062 aa26.45■■□□□ 1.82
LINC01550-201ENST00000499006 POLKQ9UBT6 870 aa26.45■■□□□ 1.82
LINC01550-201ENST00000499006 COL18A1P39060 1754 aa26.44■■□□□ 1.82
LINC01550-201ENST00000499006 RRS1Q15050 365 aaKnown RBP26.43■■□□□ 1.82
LINC01550-201ENST00000499006 RGPD5Q99666 1765 aa26.43■■□□□ 1.82
LINC01550-201ENST00000499006 CPDO75976 1380 aa26.42■■□□□ 1.82
LINC01550-201ENST00000499006 MAP3K19Q56UN5 1328 aa26.42■■□□□ 1.82
LINC01550-201ENST00000499006 ARHGEF25Q86VW2 580 aa26.42■■□□□ 1.82
LINC01550-201ENST00000499006 EMILIN1Q9Y6C2 1016 aa26.42■■□□□ 1.82
LINC01550-201ENST00000499006 MTHFSP49914 203 aa26.41■■□□□ 1.82
LINC01550-201ENST00000499006 CDK12Q9NYV4 1490 aaPredicted RBP26.4■■□□□ 1.82
LINC01550-201ENST00000499006 KIF24Q5T7B8 1368 aa26.39■■□□□ 1.82
LINC01550-201ENST00000499006 ABCC6O95255 1503 aa26.39■■□□□ 1.81
LINC01550-201ENST00000499006 ZC3H6P61129 1189 aaKnown RBP26.38■■□□□ 1.81
LINC01550-201ENST00000499006 SPATA31A6Q5VVP1 1343 aa26.38■■□□□ 1.81
LINC01550-201ENST00000499006 HAP1P54257 671 aaPredicted RBP26.37■■□□□ 1.81
LINC01550-201ENST00000499006 LMO7Q8WWI1 1683 aa26.37■■□□□ 1.81
LINC01550-201ENST00000499006 RTL1A6NKG5 1358 aa26.37■■□□□ 1.81
LINC01550-201ENST00000499006 KIAA0232Q92628 1395 aa26.37■■□□□ 1.81
LINC01550-201ENST00000499006 INSRP06213 1382 aa26.36■■□□□ 1.81
LINC01550-201ENST00000499006 FLT4P35916 1363 aa26.35■■□□□ 1.81
LINC01550-201ENST00000499006 COL3A1P02461 1466 aaPredicted RBP26.35■■□□□ 1.81
LINC01550-201ENST00000499006 COL14A1Q05707 1796 aaKnown RBP26.35■■□□□ 1.81
LINC01550-201ENST00000499006 CCER2I3L3R5 266 aa26.35■■□□□ 1.81
LINC01550-201ENST00000499006 CCDC184Q52MB2 194 aa26.35■■□□□ 1.81
LINC01550-201ENST00000499006 PPM1GO15355 546 aaPredicted RBP26.33■■□□□ 1.81
LINC01550-201ENST00000499006 HOXC9P31274 260 aa26.33■■□□□ 1.81
LINC01550-201ENST00000499006 IP6K1Q92551 441 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms