RNA–Protein interactions for RNA: ENST00000498793.5

SCMH1-217, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-217ENST00000498793 EVC2Q86UK5 1308 aa16.47■□□□□ 0.23
SCMH1-217ENST00000498793 CLSPNQ9HAW4 1339 aa16.47■□□□□ 0.23
SCMH1-217ENST00000498793 CABP1Q9NZU7 370 aa16.47■□□□□ 0.23
SCMH1-217ENST00000498793 ST20-MTHFSA0A0A6YYL1 179 aa16.46■□□□□ 0.23
SCMH1-217ENST00000498793 TESK2Q96S53 571 aa16.46■□□□□ 0.23
SCMH1-217ENST00000498793 CD163L1Q9NR16 1453 aa16.46■□□□□ 0.23
SCMH1-217ENST00000498793 MYOM1P52179 1685 aa16.46■□□□□ 0.23
SCMH1-217ENST00000498793 PLEKHG3A1L390 1219 aa16.45■□□□□ 0.22
SCMH1-217ENST00000498793 NGLY1Q96IV0 654 aa16.45■□□□□ 0.22
SCMH1-217ENST00000498793 ARHGEF10O15013 1369 aa16.45■□□□□ 0.22
SCMH1-217ENST00000498793 SBNO2Q9Y2G9 1366 aa16.45■□□□□ 0.22
SCMH1-217ENST00000498793 NWD2Q9ULI1 1742 aa16.45■□□□□ 0.22
SCMH1-217ENST00000498793 USP6P35125 1406 aa16.45■□□□□ 0.22
SCMH1-217ENST00000498793 BCL9LQ86UU0 1499 aa16.44■□□□□ 0.22
SCMH1-217ENST00000498793 GLI3P10071 1580 aa16.43■□□□□ 0.22
SCMH1-217ENST00000498793 BRWD3Q6RI45 1802 aa16.43■□□□□ 0.22
SCMH1-217ENST00000498793 SLIT2O94813 1529 aa16.43■□□□□ 0.22
SCMH1-217ENST00000498793 COL14A1Q05707 1796 aaKnown RBP16.43■□□□□ 0.22
SCMH1-217ENST00000498793 RGPD5Q99666 1765 aa16.43■□□□□ 0.22
SCMH1-217ENST00000498793 RGS12O14924 1447 aa16.43■□□□□ 0.22
SCMH1-217ENST00000498793 ATRNO75882 1429 aa16.42■□□□□ 0.22
SCMH1-217ENST00000498793 SSH2Q76I76 1423 aa16.42■□□□□ 0.22
SCMH1-217ENST00000498793 SOCS7O14512 581 aa16.41■□□□□ 0.22
SCMH1-217ENST00000498793 HAP1P54257 671 aaPredicted RBP16.41■□□□□ 0.22
SCMH1-217ENST00000498793 ZNF772Q68DY9 489 aaPredicted RBP16.4■□□□□ 0.22
SCMH1-217ENST00000498793 USP21Q9UK80 565 aa16.4■□□□□ 0.22
SCMH1-217ENST00000498793 ATAD2Q6PL18 1390 aa16.39■□□□□ 0.21
SCMH1-217ENST00000498793 CPSF1Q10570 1443 aaKnown RBP16.39■□□□□ 0.21
SCMH1-217ENST00000498793 FNBP4Q8N3X1 1017 aaPredicted RBP16.39■□□□□ 0.21
SCMH1-217ENST00000498793 ZRANB1Q9UGI0 708 aa16.39■□□□□ 0.21
SCMH1-217ENST00000498793 LMO7Q8WWI1 1683 aa16.38■□□□□ 0.21
SCMH1-217ENST00000498793 FAM83GA6ND36 823 aa16.38■□□□□ 0.21
SCMH1-217ENST00000498793 SLC12A5Q9H2X9 1139 aa16.38■□□□□ 0.21
SCMH1-217ENST00000498793 QTRT2Q9H974 415 aaKnown RBP16.38■□□□□ 0.21
SCMH1-217ENST00000498793 SLIT3O75094 1523 aa16.37■□□□□ 0.21
SCMH1-217ENST00000498793 CHRNA2Q15822 529 aa16.37■□□□□ 0.21
SCMH1-217ENST00000498793 TMC1Q8TDI8 760 aa16.37■□□□□ 0.21
SCMH1-217ENST00000498793 KIAA0232Q92628 1395 aa16.37■□□□□ 0.21
SCMH1-217ENST00000498793 USP54Q70EL1 1684 aa16.37■□□□□ 0.21
SCMH1-217ENST00000498793 COL18A1P39060 1754 aa16.36■□□□□ 0.21
SCMH1-217ENST00000498793 EP400Q96L91 3159 aa16.36■□□□□ 0.21
SCMH1-217ENST00000498793 ZC3H6P61129 1189 aaKnown RBP16.36■□□□□ 0.21
SCMH1-217ENST00000498793 ABTB2Q8N961 1025 aa16.36■□□□□ 0.21
SCMH1-217ENST00000498793 USP19O94966 1318 aa16.36■□□□□ 0.21
SCMH1-217ENST00000498793 A0A1W2PP64 1363 aa16.36■□□□□ 0.21
SCMH1-217ENST00000498793 KTN1Q86UP2 1357 aaKnown RBP16.36■□□□□ 0.21
SCMH1-217ENST00000498793 LTN1O94822 1766 aa16.36■□□□□ 0.21
SCMH1-217ENST00000498793 RXRBP28702 533 aa16.35■□□□□ 0.21
SCMH1-217ENST00000498793 TTC21BQ7Z4L5 1316 aa16.35■□□□□ 0.21
SCMH1-217ENST00000498793 KIF20BQ96Q89 1820 aa16.34■□□□□ 0.21
SCMH1-217ENST00000498793 TIMELESSQ9UNS1 1208 aa16.34■□□□□ 0.21
SCMH1-217ENST00000498793 NFAT5O94916 1531 aa16.34■□□□□ 0.21
SCMH1-217ENST00000498793 SOX12O15370 315 aa16.33■□□□□ 0.2
SCMH1-217ENST00000498793 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.33■□□□□ 0.2
SCMH1-217ENST00000498793 CAMTA1Q9Y6Y1 1673 aa16.33■□□□□ 0.2
SCMH1-217ENST00000498793 ZBTB7CA1YPR0 619 aa16.32■□□□□ 0.2
SCMH1-217ENST00000498793 HSPA5P11021 654 aaKnown RBP16.32■□□□□ 0.2
SCMH1-217ENST00000498793 NME9Q86XW9 330 aa16.32■□□□□ 0.2
SCMH1-217ENST00000498793 UNC5CLQ8IV45 518 aa16.32■□□□□ 0.2
SCMH1-217ENST00000498793 CDK12Q9NYV4 1490 aaPredicted RBP16.31■□□□□ 0.2
SCMH1-217ENST00000498793 RBM6P78332 1123 aaKnown RBP16.31■□□□□ 0.2
SCMH1-217ENST00000498793 PRDM11Q9NQV5 511 aa16.31■□□□□ 0.2
SCMH1-217ENST00000498793 BTG4Q9NY30 223 aa16.31■□□□□ 0.2
SCMH1-217ENST00000498793 TRPC5Q9UL62 973 aaPredicted RBP16.31■□□□□ 0.2
SCMH1-217ENST00000498793 NLRP6P59044 892 aa16.3■□□□□ 0.2
SCMH1-217ENST00000498793 WNK3Q9BYP7 1800 aa16.29■□□□□ 0.2
SCMH1-217ENST00000498793 EDC4Q6P2E9 1401 aaKnown RBP16.28■□□□□ 0.2
SCMH1-217ENST00000498793 THSD7AQ9UPZ6 1657 aa16.27■□□□□ 0.2
SCMH1-217ENST00000498793 GCP02774 474 aa16.27■□□□□ 0.2
SCMH1-217ENST00000498793 TMF1P82094 1093 aa16.27■□□□□ 0.2
SCMH1-217ENST00000498793 GJD4Q96KN9 370 aaPredicted RBP16.27■□□□□ 0.2
SCMH1-217ENST00000498793 POLR3GLQ9BT43 218 aa16.27■□□□□ 0.2
SCMH1-217ENST00000498793 CCDC9Q9Y3X0 531 aaKnown RBP16.27■□□□□ 0.2
SCMH1-217ENST00000498793 RGPD2P0DJD1 1756 aa16.27■□□□□ 0.2
SCMH1-217ENST00000498793 BRD4O60885 1362 aaPredicted RBP16.26■□□□□ 0.19
SCMH1-217ENST00000498793 NLRP13Q86W25 1043 aa16.26■□□□□ 0.19
SCMH1-217ENST00000498793 STRN4Q9NRL3 753 aa16.26■□□□□ 0.19
SCMH1-217ENST00000498793 OVOS2A0A0J9YW53 1432 aa16.26■□□□□ 0.19
SCMH1-217ENST00000498793 OVOS2Q6IE36 1432 aa16.26■□□□□ 0.19
SCMH1-217ENST00000498793 C11orf95C9JLR9 678 aaPredicted RBP16.25■□□□□ 0.19
SCMH1-217ENST00000498793 VPS72Q15906 364 aa16.25■□□□□ 0.19
SCMH1-217ENST00000498793 CPDO75976 1380 aa16.25■□□□□ 0.19
SCMH1-217ENST00000498793 ANKRD36BQ8N2N9 1353 aa16.25■□□□□ 0.19
SCMH1-217ENST00000498793 TTC21AQ8NDW8 1320 aa16.24■□□□□ 0.19
SCMH1-217ENST00000498793 COL5A2P05997 1499 aaPredicted RBP16.24■□□□□ 0.19
SCMH1-217ENST00000498793 HDGFL2Q7Z4V5 671 aaPredicted RBP16.24■□□□□ 0.19
SCMH1-217ENST00000498793 ZNF692Q9BU19 519 aaPredicted RBP16.24■□□□□ 0.19
SCMH1-217ENST00000498793 FBLN1P23142 703 aa16.23■□□□□ 0.19
SCMH1-217ENST00000498793 EIF4G2P78344 907 aaKnown RBP eCLIP16.22■□□□□ 0.19
SCMH1-217ENST00000498793 FAM98CQ17RN3 349 aaKnown RBP16.22■□□□□ 0.19
SCMH1-217ENST00000498793 LARP1Q6PKG0 1096 aaKnown RBP16.22■□□□□ 0.19
SCMH1-217ENST00000498793 USP31Q70CQ4 1352 aa16.22■□□□□ 0.19
SCMH1-217ENST00000498793 PEAK1Q9H792 1746 aa16.22■□□□□ 0.19
SCMH1-217ENST00000498793 SPATA31A5Q5VU36 1347 aa16.21■□□□□ 0.19
SCMH1-217ENST00000498793 SPATA31A7Q8IWB4 1347 aa16.21■□□□□ 0.19
SCMH1-217ENST00000498793 PUS7Q96PZ0 661 aaKnown RBP16.21■□□□□ 0.19
SCMH1-217ENST00000498793 TERF2IPQ9NYB0 399 aa16.21■□□□□ 0.19
SCMH1-217ENST00000498793 AXIN2Q9Y2T1 843 aa16.21■□□□□ 0.19
SCMH1-217ENST00000498793 ANKRD26Q9UPS8 1709 aa16.21■□□□□ 0.19
SCMH1-217ENST00000498793 NINLQ9Y2I6 1382 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms