RNA–Protein interactions for RNA: ENST00000498698.1

HMGCL-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-207ENST00000498698 TRPM3Q9HCF6 1732 aaPredicted RBP13.55□□□□□ -0.24
HMGCL-207ENST00000498698 ATAD2Q6PL18 1390 aa13.55□□□□□ -0.24
HMGCL-207ENST00000498698 NUTM2GQ5VZR2 741 aa13.54□□□□□ -0.24
HMGCL-207ENST00000498698 CABP1Q9NZU7 370 aa13.54□□□□□ -0.24
HMGCL-207ENST00000498698 PRDM11Q9NQV5 511 aa13.53□□□□□ -0.24
HMGCL-207ENST00000498698 CCDC9Q9Y3X0 531 aaKnown RBP13.53□□□□□ -0.24
HMGCL-207ENST00000498698 EVC2Q86UK5 1308 aa13.53□□□□□ -0.24
HMGCL-207ENST00000498698 PPIP5K1Q6PFW1 1433 aa13.53□□□□□ -0.24
HMGCL-207ENST00000498698 SEPT12Q8IYM1 358 aa13.52□□□□□ -0.25
HMGCL-207ENST00000498698 ABTB2Q8N961 1025 aa13.52□□□□□ -0.25
HMGCL-207ENST00000498698 ALS2Q96Q42 1657 aa13.52□□□□□ -0.25
HMGCL-207ENST00000498698 GLI3P10071 1580 aa13.51□□□□□ -0.25
HMGCL-207ENST00000498698 KIAA0232Q92628 1395 aa13.51□□□□□ -0.25
HMGCL-207ENST00000498698 TONSLQ96HA7 1378 aa13.51□□□□□ -0.25
HMGCL-207ENST00000498698 ZC3H6P61129 1189 aaKnown RBP13.51□□□□□ -0.25
HMGCL-207ENST00000498698 BRD4O60885 1362 aaPredicted RBP13.5□□□□□ -0.25
HMGCL-207ENST00000498698 USP19O94966 1318 aa13.5□□□□□ -0.25
HMGCL-207ENST00000498698 CHRNA2Q15822 529 aa13.5□□□□□ -0.25
HMGCL-207ENST00000498698 CARD11Q9BXL7 1154 aa13.5□□□□□ -0.25
HMGCL-207ENST00000498698 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.5□□□□□ -0.25
HMGCL-207ENST00000498698 MARF1Q9Y4F3 1742 aaKnown RBP13.5□□□□□ -0.25
HMGCL-207ENST00000498698 TRPM1Q7Z4N2 1603 aa13.5□□□□□ -0.25
HMGCL-207ENST00000498698 SPATA31A5Q5VU36 1347 aa13.49□□□□□ -0.25
HMGCL-207ENST00000498698 SPATA31A7Q8IWB4 1347 aa13.49□□□□□ -0.25
HMGCL-207ENST00000498698 NLRP13Q86W25 1043 aa13.49□□□□□ -0.25
HMGCL-207ENST00000498698 CCDC125Q86Z20 511 aa13.49□□□□□ -0.25
HMGCL-207ENST00000498698 TOPAZ1Q8N9V7 1692 aa13.48□□□□□ -0.25
HMGCL-207ENST00000498698 GCP02774 474 aa13.48□□□□□ -0.25
HMGCL-207ENST00000498698 FAM98CQ17RN3 349 aaKnown RBP13.48□□□□□ -0.25
HMGCL-207ENST00000498698 USP6P35125 1406 aa13.47□□□□□ -0.25
HMGCL-207ENST00000498698 SSH2Q76I76 1423 aa13.47□□□□□ -0.25
HMGCL-207ENST00000498698 ABCA3Q99758 1704 aa13.47□□□□□ -0.25
HMGCL-207ENST00000498698 SBNO2Q9Y2G9 1366 aa13.47□□□□□ -0.25
HMGCL-207ENST00000498698 KRT27Q7Z3Y8 459 aa13.47□□□□□ -0.25
HMGCL-207ENST00000498698 ITSN1Q15811 1721 aa13.47□□□□□ -0.25
HMGCL-207ENST00000498698 CPDO75976 1380 aa13.46□□□□□ -0.25
HMGCL-207ENST00000498698 ZNF692Q9BU19 519 aaPredicted RBP13.46□□□□□ -0.25
HMGCL-207ENST00000498698 NWD2Q9ULI1 1742 aa13.45□□□□□ -0.26
HMGCL-207ENST00000498698 QRICH2Q9H0J4 1663 aa13.45□□□□□ -0.26
HMGCL-207ENST00000498698 NLRP6P59044 892 aa13.45□□□□□ -0.26
HMGCL-207ENST00000498698 STRN4Q9NRL3 753 aa13.45□□□□□ -0.26
HMGCL-207ENST00000498698 COL14A1Q05707 1796 aaKnown RBP13.45□□□□□ -0.26
HMGCL-207ENST00000498698 SPATA31A1Q5TZJ5 1347 aa13.44□□□□□ -0.26
HMGCL-207ENST00000498698 PLCH1Q4KWH8 1693 aa13.44□□□□□ -0.26
HMGCL-207ENST00000498698 A0A0G2JS52 829 aa13.44□□□□□ -0.26
HMGCL-207ENST00000498698 MYT1Q01538 1121 aa13.44□□□□□ -0.26
HMGCL-207ENST00000498698 TTC21BQ7Z4L5 1316 aa13.43□□□□□ -0.26
HMGCL-207ENST00000498698 BLMP54132 1417 aaPredicted RBP13.43□□□□□ -0.26
HMGCL-207ENST00000498698 EVA1CP58658 441 aa13.43□□□□□ -0.26
HMGCL-207ENST00000498698 CPSF1Q10570 1443 aaKnown RBP13.43□□□□□ -0.26
HMGCL-207ENST00000498698 CRYBG1Q9Y4K1 1723 aa13.43□□□□□ -0.26
HMGCL-207ENST00000498698 LARP1Q6PKG0 1096 aaKnown RBP13.42□□□□□ -0.26
HMGCL-207ENST00000498698 PUS7Q96PZ0 661 aaKnown RBP13.41□□□□□ -0.26
HMGCL-207ENST00000498698 TESK2Q96S53 571 aa13.41□□□□□ -0.26
HMGCL-207ENST00000498698 NRAPQ86VF7 1730 aa13.41□□□□□ -0.26
HMGCL-207ENST00000498698 CAMTA1Q9Y6Y1 1673 aa13.4□□□□□ -0.26
HMGCL-207ENST00000498698 TTC21AQ8NDW8 1320 aa13.4□□□□□ -0.26
HMGCL-207ENST00000498698 ST20-MTHFSA0A0A6YYL1 179 aa13.4□□□□□ -0.26
HMGCL-207ENST00000498698 BARGINQ6ZT62 677 aa13.4□□□□□ -0.26
HMGCL-207ENST00000498698 SLC12A5Q9H2X9 1139 aa13.4□□□□□ -0.26
HMGCL-207ENST00000498698 AATKQ6ZMQ8 1374 aa13.4□□□□□ -0.26
HMGCL-207ENST00000498698 NRKQ7Z2Y5 1582 aa13.4□□□□□ -0.26
HMGCL-207ENST00000498698 FAM182BQ5T319 152 aa13.39□□□□□ -0.27
HMGCL-207ENST00000498698 DEFB132Q7Z7B7 95 aa13.39□□□□□ -0.27
HMGCL-207ENST00000498698 ARHGEF25Q86VW2 580 aa13.39□□□□□ -0.27
HMGCL-207ENST00000498698 USP35Q9P2H5 1018 aa13.39□□□□□ -0.27
HMGCL-207ENST00000498698 KTN1Q86UP2 1357 aaKnown RBP13.39□□□□□ -0.27
HMGCL-207ENST00000498698 PHRF1Q9P1Y6 1649 aaKnown RBP13.39□□□□□ -0.27
HMGCL-207ENST00000498698 SF3B2Q13435 895 aaKnown RBP13.38□□□□□ -0.27
HMGCL-207ENST00000498698 TCP11L2Q8N4U5 519 aa13.38□□□□□ -0.27
HMGCL-207ENST00000498698 KCNH5Q8NCM2 988 aa13.38□□□□□ -0.27
HMGCL-207ENST00000498698 TMC1Q8TDI8 760 aa13.38□□□□□ -0.27
HMGCL-207ENST00000498698 SLIT3O75094 1523 aa13.38□□□□□ -0.27
HMGCL-207ENST00000498698 EP400Q96L91 3159 aa13.38□□□□□ -0.27
HMGCL-207ENST00000498698 ZBTB7CA1YPR0 619 aa13.37□□□□□ -0.27
HMGCL-207ENST00000498698 ZRANB1Q9UGI0 708 aa13.37□□□□□ -0.27
HMGCL-207ENST00000498698 AXIN2Q9Y2T1 843 aa13.37□□□□□ -0.27
HMGCL-207ENST00000498698 CD163L1Q9NR16 1453 aa13.36□□□□□ -0.27
HMGCL-207ENST00000498698 SLC24A1O60721 1099 aa13.36□□□□□ -0.27
HMGCL-207ENST00000498698 HDGFL2Q7Z4V5 671 aaPredicted RBP13.36□□□□□ -0.27
HMGCL-207ENST00000498698 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.36□□□□□ -0.27
HMGCL-207ENST00000498698 TIMELESSQ9UNS1 1208 aa13.36□□□□□ -0.27
HMGCL-207ENST00000498698 THRAP3Q9Y2W1 955 aaKnown RBP13.36□□□□□ -0.27
HMGCL-207ENST00000498698 CLSPNQ9HAW4 1339 aa13.36□□□□□ -0.27
HMGCL-207ENST00000498698 COL5A2P05997 1499 aaPredicted RBP13.36□□□□□ -0.27
HMGCL-207ENST00000498698 USP31Q70CQ4 1352 aa13.35□□□□□ -0.27
HMGCL-207ENST00000498698 NME9Q86XW9 330 aa13.35□□□□□ -0.27
HMGCL-207ENST00000498698 PCGF6Q9BYE7 350 aa13.35□□□□□ -0.27
HMGCL-207ENST00000498698 TERF2IPQ9NYB0 399 aa13.35□□□□□ -0.27
HMGCL-207ENST00000498698 LMO7Q8WWI1 1683 aa13.34□□□□□ -0.27
HMGCL-207ENST00000498698 THSD7AQ9UPZ6 1657 aa13.34□□□□□ -0.27
HMGCL-207ENST00000498698 SOX12O15370 315 aa13.34□□□□□ -0.27
HMGCL-207ENST00000498698 FAM196AQ6ZSG2 479 aa13.34□□□□□ -0.27
HMGCL-207ENST00000498698 CRB1P82279 1406 aa13.33□□□□□ -0.28
HMGCL-207ENST00000498698 BAG6P46379 1132 aa13.33□□□□□ -0.28
HMGCL-207ENST00000498698 PDE3BQ13370 1112 aa13.33□□□□□ -0.28
HMGCL-207ENST00000498698 BRWD3Q6RI45 1802 aa13.33□□□□□ -0.28
HMGCL-207ENST00000498698 PIK3C2AO00443 1686 aa13.33□□□□□ -0.28
HMGCL-207ENST00000498698 A0A1W2PP64 1363 aa13.32□□□□□ -0.28
HMGCL-207ENST00000498698 TOM1L2Q6ZVM7 507 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms