RNA–Protein interactions for RNA: ENST00000498694.1

CTPS1-212, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 599 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-212ENST00000498694 ATP10AO60312 1499 aa6.17□□□□□ -1.42
CTPS1-212ENST00000498694 LMTK2Q8IWU2 1503 aa6.17□□□□□ -1.42
CTPS1-212ENST00000498694 GNPATO15228 680 aa6.17□□□□□ -1.42
CTPS1-212ENST00000498694 PROX2Q3B8N5 592 aa6.17□□□□□ -1.42
CTPS1-212ENST00000498694 SPNS2Q8IVW8 549 aa6.17□□□□□ -1.42
CTPS1-212ENST00000498694 ANKRD30AQ9BXX3 1397 aa6.17□□□□□ -1.42
CTPS1-212ENST00000498694 CEP152O94986 1710 aa6.16□□□□□ -1.42
CTPS1-212ENST00000498694 FER1L4A9Z1Z3 1794 aa6.16□□□□□ -1.42
CTPS1-212ENST00000498694 EFCAB6Q5THR3 1501 aa6.16□□□□□ -1.42
CTPS1-212ENST00000498694 HNRNPMP52272 730 aaKnown RBP eCLIP6.16□□□□□ -1.42
CTPS1-212ENST00000498694 PRSS12P56730 875 aa6.16□□□□□ -1.42
CTPS1-212ENST00000498694 MMRN1Q13201 1228 aa6.16□□□□□ -1.42
CTPS1-212ENST00000498694 PADI6Q6TGC4 694 aa6.16□□□□□ -1.42
CTPS1-212ENST00000498694 ANKRD13DQ6ZTN6 518 aa6.16□□□□□ -1.42
CTPS1-212ENST00000498694 KRI1Q8N9T8 703 aaKnown RBP6.16□□□□□ -1.42
CTPS1-212ENST00000498694 CDCA7LQ96GN5 454 aa6.16□□□□□ -1.42
CTPS1-212ENST00000498694 ZNF777Q9ULD5 760 aaPredicted RBP6.16□□□□□ -1.42
CTPS1-212ENST00000498694 CAMSAP1Q5T5Y3 1602 aa6.16□□□□□ -1.42
CTPS1-212ENST00000498694 MADDQ8WXG6 1647 aa6.16□□□□□ -1.42
CTPS1-212ENST00000498694 SPAG9O60271 1321 aaKnown RBP6.16□□□□□ -1.42
CTPS1-212ENST00000498694 TET3O43151 1660 aa6.16□□□□□ -1.42
CTPS1-212ENST00000498694 ANKRD50Q9ULJ7 1429 aa6.16□□□□□ -1.42
CTPS1-212ENST00000498694 ABCC3O15438 1527 aa6.15□□□□□ -1.42
CTPS1-212ENST00000498694 FECHP22830 423 aa6.15□□□□□ -1.42
CTPS1-212ENST00000498694 LSM11P83369 360 aaKnown RBP eCLIP6.15□□□□□ -1.42
CTPS1-212ENST00000498694 FAM50AQ14320 339 aaKnown RBP6.15□□□□□ -1.42
CTPS1-212ENST00000498694 RSPH4AQ5TD94 716 aa6.15□□□□□ -1.42
CTPS1-212ENST00000498694 AFAP1Q8N556 730 aa6.15□□□□□ -1.42
CTPS1-212ENST00000498694 ZBED2Q9BTP6 218 aa6.15□□□□□ -1.42
CTPS1-212ENST00000498694 DAXXQ9UER7 740 aaPredicted RBP6.15□□□□□ -1.42
CTPS1-212ENST00000498694 GTF3C3Q9Y5Q9 886 aa6.15□□□□□ -1.42
CTPS1-212ENST00000498694 DHX29Q7Z478 1369 aaKnown RBP6.15□□□□□ -1.43
CTPS1-212ENST00000498694 TRIM6-TRIM34B2RNG4 842 aa6.14□□□□□ -1.43
CTPS1-212ENST00000498694 ZMYND10O75800 440 aa6.14□□□□□ -1.43
CTPS1-212ENST00000498694 BARGINQ6ZT62 677 aa6.13□□□□□ -1.43
CTPS1-212ENST00000498694 PACS2Q86VP3 889 aa6.13□□□□□ -1.43
CTPS1-212ENST00000498694 FBXO41Q8TF61 875 aa6.13□□□□□ -1.43
CTPS1-212ENST00000498694 KRTAP3-3Q9BYR6 98 aa6.13□□□□□ -1.43
CTPS1-212ENST00000498694 KRTAP3-2Q9BYR7 98 aa6.13□□□□□ -1.43
CTPS1-212ENST00000498694 RBM27Q9P2N5 1060 aaKnown RBP6.13□□□□□ -1.43
CTPS1-212ENST00000498694 FAM198AQ9UFP1 575 aa6.13□□□□□ -1.43
CTPS1-212ENST00000498694 TSKSQ9UJT2 592 aa6.13□□□□□ -1.43
CTPS1-212ENST00000498694 VPS9D1Q9Y2B5 631 aa6.13□□□□□ -1.43
CTPS1-212ENST00000498694 PZPP20742 1482 aa6.13□□□□□ -1.43
CTPS1-212ENST00000498694 CLTCQ00610 1675 aaKnown RBP6.13□□□□□ -1.43
CTPS1-212ENST00000498694 RIMS1Q86UR5 1692 aaKnown RBP6.13□□□□□ -1.43
CTPS1-212ENST00000498694 E9PCH4 1651 aa6.12□□□□□ -1.43
CTPS1-212ENST00000498694 PTPRMP28827 1452 aa6.12□□□□□ -1.43
CTPS1-212ENST00000498694 FAM161AQ3B820 660 aa6.12□□□□□ -1.43
CTPS1-212ENST00000498694 ADGRD1Q6QNK2 874 aa6.12□□□□□ -1.43
CTPS1-212ENST00000498694 KIAA1468Q9P260 1216 aa6.12□□□□□ -1.43
CTPS1-212ENST00000498694 SPHKAPQ2M3C7 1700 aa6.11□□□□□ -1.43
CTPS1-212ENST00000498694 C3P01024 1663 aa6.11□□□□□ -1.43
CTPS1-212ENST00000498694 ZNF142P52746 1687 aaPredicted RBP6.11□□□□□ -1.43
CTPS1-212ENST00000498694 PREX1Q8TCU6 1659 aa6.11□□□□□ -1.43
CTPS1-212ENST00000498694 SPATA31D1Q6ZQQ2 1576 aa6.11□□□□□ -1.43
CTPS1-212ENST00000498694 RAB3GAP2Q9H2M9 1393 aa6.11□□□□□ -1.43
CTPS1-212ENST00000498694 NBPF26B4DH59 902 aa6.11□□□□□ -1.43
CTPS1-212ENST00000498694 MAP2K5Q13163 448 aa6.11□□□□□ -1.43
CTPS1-212ENST00000498694 STAC3Q96MF2 364 aa6.11□□□□□ -1.43
CTPS1-212ENST00000498694 SLC4A5Q9BY07 1137 aa6.11□□□□□ -1.43
CTPS1-212ENST00000498694 SLC24A3Q9HC58 644 aa6.11□□□□□ -1.43
CTPS1-212ENST00000498694 PNMA3Q9UL41 463 aa6.11□□□□□ -1.43
CTPS1-212ENST00000498694 PIK3C2BO00750 1634 aa6.1□□□□□ -1.43
CTPS1-212ENST00000498694 MYO3AQ8NEV4 1616 aa6.1□□□□□ -1.43
CTPS1-212ENST00000498694 TRPM2O94759 1503 aa6.1□□□□□ -1.43
CTPS1-212ENST00000498694 RPRD2Q5VT52 1461 aaKnown RBP6.1□□□□□ -1.43
CTPS1-212ENST00000498694 SETD5Q9C0A6 1442 aa6.1□□□□□ -1.43
CTPS1-212ENST00000498694 TK2O00142 265 aa6.1□□□□□ -1.43
CTPS1-212ENST00000498694 SMAPO00193 183 aa6.1□□□□□ -1.43
CTPS1-212ENST00000498694 TSPY4P0CV99 314 aa6.1□□□□□ -1.43
CTPS1-212ENST00000498694 TSPY10P0CW01 314 aa6.1□□□□□ -1.43
CTPS1-212ENST00000498694 NUDT18Q6ZVK8 323 aa6.1□□□□□ -1.43
CTPS1-212ENST00000498694 TTC13Q8NBP0 860 aa6.1□□□□□ -1.43
CTPS1-212ENST00000498694 CCDC102AQ96A19 550 aa6.1□□□□□ -1.43
CTPS1-212ENST00000498694 SEPT9Q9UHD8 586 aaPredicted RBP6.1□□□□□ -1.43
CTPS1-212ENST00000498694 RABGEF1Q9UJ41 708 aa6.1□□□□□ -1.43
CTPS1-212ENST00000498694 SYNMO15061 1565 aa6.1□□□□□ -1.43
CTPS1-212ENST00000498694 ARHGAP31Q2M1Z3 1444 aa6.09□□□□□ -1.43
CTPS1-212ENST00000498694 CNTLNQ9NXG0 1405 aa6.09□□□□□ -1.43
CTPS1-212ENST00000498694 MINK1Q8N4C8 1332 aaPredicted RBP6.09□□□□□ -1.43
CTPS1-212ENST00000498694 C3orf80F5H4A9 247 aa6.09□□□□□ -1.43
CTPS1-212ENST00000498694 IRF6O14896 467 aa6.09□□□□□ -1.43
CTPS1-212ENST00000498694 ONECUT3O60422 494 aaPredicted RBP6.09□□□□□ -1.43
CTPS1-212ENST00000498694 TRIM26Q12899 539 aaPredicted RBP6.09□□□□□ -1.43
CTPS1-212ENST00000498694 RBM46Q8TBY0 533 aaKnown RBP6.09□□□□□ -1.43
CTPS1-212ENST00000498694 TATDN2Q93075 761 aa6.09□□□□□ -1.43
CTPS1-212ENST00000498694 NBPF3Q9H094 633 aa6.09□□□□□ -1.43
CTPS1-212ENST00000498694 CHIC2Q9UKJ5 165 aa6.09□□□□□ -1.43
CTPS1-212ENST00000498694 ADGRG1Q9Y653 693 aa6.09□□□□□ -1.43
CTPS1-212ENST00000498694 ERVK-7P63135 1459 aa6.09□□□□□ -1.44
CTPS1-212ENST00000498694 NPATQ14207 1427 aa6.08□□□□□ -1.44
CTPS1-212ENST00000498694 TMEM132AQ24JP5 1023 aa6.08□□□□□ -1.44
CTPS1-212ENST00000498694 MRPL50Q8N5N7 158 aaKnown RBP6.08□□□□□ -1.44
CTPS1-212ENST00000498694 LMTK3Q96Q04 1460 aa6.08□□□□□ -1.44
CTPS1-212ENST00000498694 KDM5AP29375 1690 aaKnown RBP6.07□□□□□ -1.44
CTPS1-212ENST00000498694 ARID4BQ4LE39 1312 aaPredicted RBP6.07□□□□□ -1.44
CTPS1-212ENST00000498694 NEURL4Q96JN8 1562 aa6.07□□□□□ -1.44
CTPS1-212ENST00000498694 OATP04181 439 aa6.07□□□□□ -1.44
CTPS1-212ENST00000498694 ITGAEP38570 1179 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms