RNA–Protein interactions for RNA: ENST00000498535.1

MKRN1-216, Transcript of makorin ring finger protein 1, humanhuman

TSL 2

Gene MKRN1, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1-216ENST00000498535 MYT1Q01538 1121 aa36.85■■■■□ 3.49
MKRN1-216ENST00000498535 SF3B2Q13435 895 aaKnown RBP36.85■■■■□ 3.49
MKRN1-216ENST00000498535 NUDT16Q96DE0 195 aaKnown RBP36.85■■■■□ 3.49
MKRN1-216ENST00000498535 KRT27Q7Z3Y8 459 aa36.83■■■■□ 3.49
MKRN1-216ENST00000498535 ITSN1Q15811 1721 aa36.8■■■■□ 3.48
MKRN1-216ENST00000498535 CDK19Q9BWU1 502 aa36.8■■■■□ 3.48
MKRN1-216ENST00000498535 COL14A1Q05707 1796 aaKnown RBP36.8■■■■□ 3.48
MKRN1-216ENST00000498535 ATP7BP35670 1465 aa36.79■■■■□ 3.48
MKRN1-216ENST00000498535 FAM98CQ17RN3 349 aaKnown RBP36.77■■■■□ 3.48
MKRN1-216ENST00000498535 PRDM11Q9NQV5 511 aa36.76■■■■□ 3.48
MKRN1-216ENST00000498535 NRAPQ86VF7 1730 aa36.76■■■■□ 3.47
MKRN1-216ENST00000498535 DEFB132Q7Z7B7 95 aa36.74■■■■□ 3.47
MKRN1-216ENST00000498535 KIAA1210Q9ULL0 1709 aa36.73■■■■□ 3.47
MKRN1-216ENST00000498535 CCDC61Q9Y6R9 512 aa36.72■■■■□ 3.47
MKRN1-216ENST00000498535 SPATA31A5Q5VU36 1347 aa36.69■■■■□ 3.46
MKRN1-216ENST00000498535 SPATA31A7Q8IWB4 1347 aa36.69■■■■□ 3.46
MKRN1-216ENST00000498535 CRYBG1Q9Y4K1 1723 aa36.69■■■■□ 3.46
MKRN1-216ENST00000498535 ACEP12821 1306 aa36.68■■■■□ 3.46
MKRN1-216ENST00000498535 NBPF1Q3BBV0 1214 aa36.68■■■■□ 3.46
MKRN1-216ENST00000498535 POLR3AO14802 1390 aaPredicted RBP36.66■■■■□ 3.46
MKRN1-216ENST00000498535 NBPF8Q3BBV2 869 aa36.66■■■■□ 3.46
MKRN1-216ENST00000498535 KIAA0232Q92628 1395 aa36.66■■■■□ 3.46
MKRN1-216ENST00000498535 NUTM2GQ5VZR2 741 aa36.65■■■■□ 3.46
MKRN1-216ENST00000498535 PLEKHG3A1L390 1219 aa36.64■■■■□ 3.46
MKRN1-216ENST00000498535 BAG6P46379 1132 aa36.62■■■■□ 3.45
MKRN1-216ENST00000498535 ZC3H6P61129 1189 aaKnown RBP36.62■■■■□ 3.45
MKRN1-216ENST00000498535 CHRNA2Q15822 529 aa36.62■■■■□ 3.45
MKRN1-216ENST00000498535 TOPAZ1Q8N9V7 1692 aa36.61■■■■□ 3.45
MKRN1-216ENST00000498535 SRPK2P78362 688 aaKnown RBP36.61■■■■□ 3.45
MKRN1-216ENST00000498535 CENPJQ9HC77 1338 aaPredicted RBP36.59■■■■□ 3.45
MKRN1-216ENST00000498535 ABTB2Q8N961 1025 aa36.59■■■■□ 3.45
MKRN1-216ENST00000498535 STRN4Q9NRL3 753 aa36.59■■■■□ 3.45
MKRN1-216ENST00000498535 PHRF1Q9P1Y6 1649 aaKnown RBP36.58■■■■□ 3.45
MKRN1-216ENST00000498535 SPATA31A1Q5TZJ5 1347 aa36.57■■■■□ 3.44
MKRN1-216ENST00000498535 FAM182BQ5T319 152 aa36.54■■■■□ 3.44
MKRN1-216ENST00000498535 EVA1CP58658 441 aa36.53■■■■□ 3.44
MKRN1-216ENST00000498535 PPIP5K1Q6PFW1 1433 aa36.52■■■■□ 3.44
MKRN1-216ENST00000498535 CABP2Q9NPB3 220 aa36.52■■■■□ 3.44
MKRN1-216ENST00000498535 THSD7AQ9UPZ6 1657 aa36.51■■■■□ 3.44
MKRN1-216ENST00000498535 NLRP13Q86W25 1043 aa36.49■■■■□ 3.43
MKRN1-216ENST00000498535 L3MBTL2Q969R5 705 aa36.48■■■■□ 3.43
MKRN1-216ENST00000498535 USP35Q9P2H5 1018 aa36.48■■■■□ 3.43
MKRN1-216ENST00000498535 RGPD1P0DJD0 1748 aa36.46■■■■□ 3.43
MKRN1-216ENST00000498535 USP19O94966 1318 aa36.45■■■■□ 3.43
MKRN1-216ENST00000498535 EN1Q05925 392 aaPredicted RBP36.45■■■■□ 3.43
MKRN1-216ENST00000498535 CPDO75976 1380 aa36.44■■■■□ 3.42
MKRN1-216ENST00000498535 QRICH2Q9H0J4 1663 aa36.44■■■■□ 3.42
MKRN1-216ENST00000498535 NRKQ7Z2Y5 1582 aa36.44■■■■□ 3.42
MKRN1-216ENST00000498535 SSH2Q76I76 1423 aa36.43■■■■□ 3.42
MKRN1-216ENST00000498535 BRD4O60885 1362 aaPredicted RBP36.43■■■■□ 3.42
MKRN1-216ENST00000498535 FAM196AQ6ZSG2 479 aa36.43■■■■□ 3.42
MKRN1-216ENST00000498535 GCP02774 474 aa36.42■■■■□ 3.42
MKRN1-216ENST00000498535 CABP1Q9NZU7 370 aa36.42■■■■□ 3.42
MKRN1-216ENST00000498535 BARGINQ6ZT62 677 aa36.41■■■■□ 3.42
MKRN1-216ENST00000498535 CAMTA1Q9Y6Y1 1673 aa36.39■■■■□ 3.42
MKRN1-216ENST00000498535 PSDA5PKW4 1024 aaPredicted RBP36.39■■■■□ 3.42
MKRN1-216ENST00000498535 PDE3BQ13370 1112 aa36.39■■■■□ 3.42
MKRN1-216ENST00000498535 LARP1Q6PKG0 1096 aaKnown RBP36.39■■■■□ 3.42
MKRN1-216ENST00000498535 SIN3AQ96ST3 1273 aa36.39■■■■□ 3.42
MKRN1-216ENST00000498535 EVC2Q86UK5 1308 aa36.37■■■■□ 3.41
MKRN1-216ENST00000498535 TCP11L2Q8N4U5 519 aa36.37■■■■□ 3.41
MKRN1-216ENST00000498535 TRIM37O94972 964 aa36.36■■■■□ 3.41
MKRN1-216ENST00000498535 NEUROD1Q13562 356 aa36.36■■■■□ 3.41
MKRN1-216ENST00000498535 DISP2A7MBM2 1401 aa36.35■■■■□ 3.41
MKRN1-216ENST00000498535 NLRP6P59044 892 aa36.35■■■■□ 3.41
MKRN1-216ENST00000498535 USP6P35125 1406 aa36.34■■■■□ 3.41
MKRN1-216ENST00000498535 LMO7Q8WWI1 1683 aa36.33■■■■□ 3.41
MKRN1-216ENST00000498535 ZBTB7CA1YPR0 619 aa36.32■■■■□ 3.4
MKRN1-216ENST00000498535 THRAP3Q9Y2W1 955 aaKnown RBP36.32■■■■□ 3.4
MKRN1-216ENST00000498535 TNS1Q9HBL0 1735 aaKnown RBP36.31■■■■□ 3.4
MKRN1-216ENST00000498535 ROCK2O75116 1388 aaKnown RBP36.31■■■■□ 3.4
MKRN1-216ENST00000498535 TRPM1Q7Z4N2 1603 aa36.3■■■■□ 3.4
MKRN1-216ENST00000498535 APBA3O96018 575 aa36.29■■■■□ 3.4
MKRN1-216ENST00000498535 EZH2Q15910 746 aaKnown RBP36.29■■■■□ 3.4
MKRN1-216ENST00000498535 LRP5O75197 1615 aa36.28■■■■□ 3.4
MKRN1-216ENST00000498535 COL5A2P05997 1499 aaPredicted RBP36.26■■■■□ 3.4
MKRN1-216ENST00000498535 R3HDM1Q15032 1099 aaKnown RBP36.26■■■■□ 3.4
MKRN1-216ENST00000498535 CAMKK2Q96RR4 588 aa36.25■■■■□ 3.39
MKRN1-216ENST00000498535 ZNF692Q9BU19 519 aaPredicted RBP36.25■■■■□ 3.39
MKRN1-216ENST00000498535 AATKQ6ZMQ8 1374 aa36.23■■■■□ 3.39
MKRN1-216ENST00000498535 PARD3Q8TEW0 1356 aa36.22■■■■□ 3.39
MKRN1-216ENST00000498535 CRB1P82279 1406 aa36.22■■■■□ 3.39
MKRN1-216ENST00000498535 SLIT3O75094 1523 aa36.21■■■■□ 3.39
MKRN1-216ENST00000498535 C11orf95C9JLR9 678 aaPredicted RBP36.18■■■■□ 3.38
MKRN1-216ENST00000498535 TTC21BQ7Z4L5 1316 aa36.17■■■■□ 3.38
MKRN1-216ENST00000498535 PIK3C2AO00443 1686 aa36.16■■■■□ 3.38
MKRN1-216ENST00000498535 TOM1L2Q6ZVM7 507 aa36.16■■■■□ 3.38
MKRN1-216ENST00000498535 PARP4Q9UKK3 1724 aaKnown RBP36.15■■■■□ 3.38
MKRN1-216ENST00000498535 KCNH5Q8NCM2 988 aa36.15■■■■□ 3.38
MKRN1-216ENST00000498535 TTC21AQ8NDW8 1320 aa36.13■■■■□ 3.37
MKRN1-216ENST00000498535 SOX12O15370 315 aa36.1■■■■□ 3.37
MKRN1-216ENST00000498535 DDB1Q16531 1140 aa36.1■■■■□ 3.37
MKRN1-216ENST00000498535 KTN1Q86UP2 1357 aaKnown RBP36.1■■■■□ 3.37
MKRN1-216ENST00000498535 WDR17Q8IZU2 1322 aa36.09■■■■□ 3.37
MKRN1-216ENST00000498535 CPSF1Q10570 1443 aaKnown RBP36.09■■■■□ 3.37
MKRN1-216ENST00000498535 NBPF14Q5TI25 921 aa36.09■■■■□ 3.37
MKRN1-216ENST00000498535 ARHGEF25Q86VW2 580 aa36.09■■■■□ 3.37
MKRN1-216ENST00000498535 AXIN2Q9Y2T1 843 aa36.09■■■■□ 3.37
MKRN1-216ENST00000498535 AKAP12Q02952 1782 aa36.09■■■■□ 3.37
MKRN1-216ENST00000498535 OVOS2A0A0G2JMS6 1433 aa36.08■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms