RNA–Protein interactions for RNA: ENST00000498529.5

CSNK1E-214, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 381 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-214ENST00000498529 RGPD3A6NKT7 1758 aaPredicted RBP8.66□□□□□ -1.02
CSNK1E-214ENST00000498529 RGPD4Q7Z3J3 1758 aa8.66□□□□□ -1.02
CSNK1E-214ENST00000498529 ITSN1Q15811 1721 aa8.66□□□□□ -1.02
CSNK1E-214ENST00000498529 ADGRB1O14514 1584 aa8.65□□□□□ -1.02
CSNK1E-214ENST00000498529 DLC1Q96QB1 1528 aa8.65□□□□□ -1.02
CSNK1E-214ENST00000498529 TNS3Q68CZ2 1445 aa8.65□□□□□ -1.02
CSNK1E-214ENST00000498529 LRPPRCP42704 1394 aaKnown RBP8.65□□□□□ -1.02
CSNK1E-214ENST00000498529 PLEKHH1Q9ULM0 1364 aa8.65□□□□□ -1.02
CSNK1E-214ENST00000498529 NPHP3Q7Z494 1330 aa8.65□□□□□ -1.02
CSNK1E-214ENST00000498529 ARHGEF28Q8N1W1 1705 aaKnown RBP8.65□□□□□ -1.03
CSNK1E-214ENST00000498529 ABCC11Q96J66 1382 aa8.64□□□□□ -1.03
CSNK1E-214ENST00000498529 SBF2Q86WG5 1849 aa8.64□□□□□ -1.03
CSNK1E-214ENST00000498529 CCDC125Q86Z20 511 aa8.64□□□□□ -1.03
CSNK1E-214ENST00000498529 GJD4Q96KN9 370 aaPredicted RBP8.64□□□□□ -1.03
CSNK1E-214ENST00000498529 LMO7Q8WWI1 1683 aa8.63□□□□□ -1.03
CSNK1E-214ENST00000498529 SPATA31A3Q5VYP0 1347 aa8.63□□□□□ -1.03
CSNK1E-214ENST00000498529 RPGRIP1LQ68CZ1 1315 aa8.63□□□□□ -1.03
CSNK1E-214ENST00000498529 PEAK1Q9H792 1746 aa8.63□□□□□ -1.03
CSNK1E-214ENST00000498529 ONECUT3O60422 494 aaPredicted RBP8.62□□□□□ -1.03
CSNK1E-214ENST00000498529 ZRANB1Q9UGI0 708 aa8.62□□□□□ -1.03
CSNK1E-214ENST00000498529 YTHDC2Q9H6S0 1430 aaKnown RBP8.62□□□□□ -1.03
CSNK1E-214ENST00000498529 CASZ1Q86V15 1759 aa8.61□□□□□ -1.03
CSNK1E-214ENST00000498529 ADGRF5Q8IZF2 1346 aa8.61□□□□□ -1.03
CSNK1E-214ENST00000498529 PARP4Q9UKK3 1724 aaKnown RBP8.61□□□□□ -1.03
CSNK1E-214ENST00000498529 C19orf67A6NJJ6 358 aa8.61□□□□□ -1.03
CSNK1E-214ENST00000498529 ZNF326Q5BKZ1 582 aaKnown RBP8.61□□□□□ -1.03
CSNK1E-214ENST00000498529 NRKQ7Z2Y5 1582 aa8.61□□□□□ -1.03
CSNK1E-214ENST00000498529 SBNO1A3KN83 1393 aa8.61□□□□□ -1.03
CSNK1E-214ENST00000498529 VGFO15240 615 aaPredicted RBP8.6□□□□□ -1.03
CSNK1E-214ENST00000498529 PRKAR2AP13861 404 aaKnown RBP8.6□□□□□ -1.03
CSNK1E-214ENST00000498529 IFNLR1Q8IU57 520 aaPredicted RBP8.6□□□□□ -1.03
CSNK1E-214ENST00000498529 UNC5CLQ8IV45 518 aa8.6□□□□□ -1.03
CSNK1E-214ENST00000498529 ANKARQ7Z5J8 1434 aa8.6□□□□□ -1.03
CSNK1E-214ENST00000498529 TULP4Q9NRJ4 1543 aa8.59□□□□□ -1.03
CSNK1E-214ENST00000498529 DEFB132Q7Z7B7 95 aa8.59□□□□□ -1.03
CSNK1E-214ENST00000498529 FOXO3O43524 673 aa8.58□□□□□ -1.04
CSNK1E-214ENST00000498529 XPCQ01831 940 aaPredicted RBP8.58□□□□□ -1.04
CSNK1E-214ENST00000498529 VPS72Q15906 364 aa8.58□□□□□ -1.04
CSNK1E-214ENST00000498529 ZNF692Q9BU19 519 aaPredicted RBP8.58□□□□□ -1.04
CSNK1E-214ENST00000498529 ANKRD30BQ9BXX2 1392 aa8.58□□□□□ -1.04
CSNK1E-214ENST00000498529 CAMTA1Q9Y6Y1 1673 aa8.57□□□□□ -1.04
CSNK1E-214ENST00000498529 ESCO1Q5FWF5 840 aa8.57□□□□□ -1.04
CSNK1E-214ENST00000498529 LRRC37A3O60309 1634 aa8.57□□□□□ -1.04
CSNK1E-214ENST00000498529 WAPLQ7Z5K2 1190 aa8.56□□□□□ -1.04
CSNK1E-214ENST00000498529 ATP7BP35670 1465 aa8.56□□□□□ -1.04
CSNK1E-214ENST00000498529 KIAA1210Q9ULL0 1709 aa8.55□□□□□ -1.04
CSNK1E-214ENST00000498529 HRCP23327 699 aa8.55□□□□□ -1.04
CSNK1E-214ENST00000498529 SEPT12Q8IYM1 358 aa8.55□□□□□ -1.04
CSNK1E-214ENST00000498529 SIRT1Q96EB6 747 aa8.55□□□□□ -1.04
CSNK1E-214ENST00000498529 ARHGEF10O15013 1369 aa8.55□□□□□ -1.04
CSNK1E-214ENST00000498529 COL18A1P39060 1754 aa8.55□□□□□ -1.04
CSNK1E-214ENST00000498529 UTRNP46939 3433 aa8.54□□□□□ -1.04
CSNK1E-214ENST00000498529 AKAP12Q02952 1782 aa8.54□□□□□ -1.04
CSNK1E-214ENST00000498529 COL24A1Q17RW2 1714 aa8.54□□□□□ -1.04
CSNK1E-214ENST00000498529 CHD4Q14839 1912 aa8.53□□□□□ -1.04
CSNK1E-214ENST00000498529 ITGAEP38570 1179 aa8.53□□□□□ -1.04
CSNK1E-214ENST00000498529 PRR36Q9H6K5 1346 aa8.53□□□□□ -1.04
CSNK1E-214ENST00000498529 KRT28Q7Z3Y7 464 aa8.52□□□□□ -1.05
CSNK1E-214ENST00000498529 KRT27Q7Z3Y8 459 aa8.52□□□□□ -1.05
CSNK1E-214ENST00000498529 CABLES1Q8TDN4 633 aa8.52□□□□□ -1.05
CSNK1E-214ENST00000498529 RGPD5Q99666 1765 aa8.52□□□□□ -1.05
CSNK1E-214ENST00000498529 MYOM1P52179 1685 aa8.52□□□□□ -1.05
CSNK1E-214ENST00000498529 FAM83GA6ND36 823 aa8.51□□□□□ -1.05
CSNK1E-214ENST00000498529 TMEM132EQ6IEE7 984 aa8.51□□□□□ -1.05
CSNK1E-214ENST00000498529 C14orf93Q9H972 538 aaKnown RBP8.51□□□□□ -1.05
CSNK1E-214ENST00000498529 PHF8Q9UPP1 1060 aa8.51□□□□□ -1.05
CSNK1E-214ENST00000498529 SPATA31A5Q5VU36 1347 aa8.51□□□□□ -1.05
CSNK1E-214ENST00000498529 SPATA31A7Q8IWB4 1347 aa8.51□□□□□ -1.05
CSNK1E-214ENST00000498529 PAPPAQ13219 1627 aa8.51□□□□□ -1.05
CSNK1E-214ENST00000498529 USP54Q70EL1 1684 aa8.5□□□□□ -1.05
CSNK1E-214ENST00000498529 NUTM2FA1L443 756 aa8.5□□□□□ -1.05
CSNK1E-214ENST00000498529 PIK3C2AO00443 1686 aa8.49□□□□□ -1.05
CSNK1E-214ENST00000498529 PARD3Q8TEW0 1356 aa8.49□□□□□ -1.05
CSNK1E-214ENST00000498529 QSER1Q2KHR3 1735 aa8.49□□□□□ -1.05
CSNK1E-214ENST00000498529 PSDA5PKW4 1024 aaPredicted RBP8.49□□□□□ -1.05
CSNK1E-214ENST00000498529 SLIT3O75094 1523 aa8.49□□□□□ -1.05
CSNK1E-214ENST00000498529 TUBGCP6Q96RT7 1819 aa8.48□□□□□ -1.05
CSNK1E-214ENST00000498529 STK26Q9P289 416 aa8.48□□□□□ -1.05
CSNK1E-214ENST00000498529 QRICH2Q9H0J4 1663 aa8.48□□□□□ -1.05
CSNK1E-214ENST00000498529 ACIN1Q9UKV3 1341 aaKnown RBP8.48□□□□□ -1.05
CSNK1E-214ENST00000498529 TRPM1Q7Z4N2 1603 aa8.47□□□□□ -1.05
CSNK1E-214ENST00000498529 SSH2Q76I76 1423 aa8.47□□□□□ -1.05
CSNK1E-214ENST00000498529 POTEMA6NI47 508 aa8.47□□□□□ -1.05
CSNK1E-214ENST00000498529 BAG6P46379 1132 aa8.47□□□□□ -1.05
CSNK1E-214ENST00000498529 FAM98CQ17RN3 349 aaKnown RBP8.47□□□□□ -1.05
CSNK1E-214ENST00000498529 CAMKK2Q96RR4 588 aa8.47□□□□□ -1.05
CSNK1E-214ENST00000498529 CLEC11AQ9Y240 323 aa8.47□□□□□ -1.05
CSNK1E-214ENST00000498529 SPATA31A1Q5TZJ5 1347 aa8.47□□□□□ -1.05
CSNK1E-214ENST00000498529 POLR3AO14802 1390 aaPredicted RBP8.47□□□□□ -1.05
CSNK1E-214ENST00000498529 DHX57Q6P158 1386 aaKnown RBP8.47□□□□□ -1.05
CSNK1E-214ENST00000498529 NHSQ6T4R5 1651 aa8.46□□□□□ -1.05
CSNK1E-214ENST00000498529 EN1Q05925 392 aaPredicted RBP8.46□□□□□ -1.06
CSNK1E-214ENST00000498529 EIF3AQ14152 1382 aaKnown RBP8.46□□□□□ -1.06
CSNK1E-214ENST00000498529 COL5A2P05997 1499 aaPredicted RBP8.45□□□□□ -1.06
CSNK1E-214ENST00000498529 CFAP70Q5T0N1 1121 aa8.45□□□□□ -1.06
CSNK1E-214ENST00000498529 SPOCK2Q92563 424 aa8.45□□□□□ -1.06
CSNK1E-214ENST00000498529 PRAM1Q96QH2 718 aa8.45□□□□□ -1.06
CSNK1E-214ENST00000498529 BTG4Q9NY30 223 aa8.45□□□□□ -1.06
CSNK1E-214ENST00000498529 CPDO75976 1380 aa8.45□□□□□ -1.06
CSNK1E-214ENST00000498529 KIAA0232Q92628 1395 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms