RNA–Protein interactions for RNA: ENST00000498509.2

PHF7-209, Transcript of PHD finger protein 7, humanhuman

TSL 1 (best)

Gene PHF7, Length 1,727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF7-209ENST00000498509 ABCC10Q5T3U5 1492 aa11.34□□□□□ -0.59
PHF7-209ENST00000498509 MBD3O95983 291 aa11.34□□□□□ -0.59
PHF7-209ENST00000498509 PLCD3Q8N3E9 789 aa11.34□□□□□ -0.59
PHF7-209ENST00000498509 CWC22Q9HCG8 908 aaKnown RBP11.34□□□□□ -0.59
PHF7-209ENST00000498509 FOXD4L1Q9NU39 408 aa11.34□□□□□ -0.59
PHF7-209ENST00000498509 MORC2Q9Y6X9 1032 aaPredicted RBP11.34□□□□□ -0.59
PHF7-209ENST00000498509 EIF2AK4Q9P2K8 1649 aaKnown RBP11.34□□□□□ -0.59
PHF7-209ENST00000498509 SCAF11Q99590 1463 aaKnown RBP11.33□□□□□ -0.6
PHF7-209ENST00000498509 SYNMO15061 1565 aa11.33□□□□□ -0.6
PHF7-209ENST00000498509 SSFA2P28290 1259 aa11.33□□□□□ -0.6
PHF7-209ENST00000498509 PPP2R1AP30153 589 aa11.33□□□□□ -0.6
PHF7-209ENST00000498509 CAVIN1Q6NZI2 390 aaKnown RBP11.33□□□□□ -0.6
PHF7-209ENST00000498509 CFAP44Q96MT7 982 aa11.33□□□□□ -0.6
PHF7-209ENST00000498509 GEMIN8Q9NWZ8 242 aaKnown RBP11.33□□□□□ -0.6
PHF7-209ENST00000498509 PTPRGP23470 1445 aa11.33□□□□□ -0.6
PHF7-209ENST00000498509 PTMAP06454 111 aaKnown RBP11.32□□□□□ -0.6
PHF7-209ENST00000498509 AXDND1Q5T1B0 1012 aaPredicted RBP11.32□□□□□ -0.6
PHF7-209ENST00000498509 KANK1Q14678 1352 aa11.32□□□□□ -0.6
PHF7-209ENST00000498509 PRAG1Q86YV5 1406 aa11.32□□□□□ -0.6
PHF7-209ENST00000498509 ERBINQ96RT1 1412 aa11.32□□□□□ -0.6
PHF7-209ENST00000498509 CROCC2H7BZ55 1655 aa11.32□□□□□ -0.6
PHF7-209ENST00000498509 CC2D1BQ5T0F9 858 aaKnown RBP11.32□□□□□ -0.6
PHF7-209ENST00000498509 PANK1Q8TE04 598 aa11.32□□□□□ -0.6
PHF7-209ENST00000498509 DDX41Q9UJV9 622 aaKnown RBP11.32□□□□□ -0.6
PHF7-209ENST00000498509 CLGNO14967 610 aa11.31□□□□□ -0.6
PHF7-209ENST00000498509 TERF2Q15554 542 aa11.3□□□□□ -0.6
PHF7-209ENST00000498509 CTR9Q6PD62 1173 aa11.3□□□□□ -0.6
PHF7-209ENST00000498509 CNKSR2Q8WXI2 1034 aa11.3□□□□□ -0.6
PHF7-209ENST00000498509 SECISBP2LQ93073 1101 aaKnown RBP11.3□□□□□ -0.6
PHF7-209ENST00000498509 KIF2CQ99661 725 aa11.3□□□□□ -0.6
PHF7-209ENST00000498509 BCCIPQ9P287 314 aaKnown RBP eCLIP11.3□□□□□ -0.6
PHF7-209ENST00000498509 CTNNA3Q9UI47 895 aa11.3□□□□□ -0.6
PHF7-209ENST00000498509 ASXL1Q8IXJ9 1541 aa11.3□□□□□ -0.6
PHF7-209ENST00000498509 SPDYE4A6NLX3 237 aa11.29□□□□□ -0.6
PHF7-209ENST00000498509 PHF14O94880 888 aa11.29□□□□□ -0.6
PHF7-209ENST00000498509 U2AF2P26368 475 aaKnown RBP eCLIP11.29□□□□□ -0.6
PHF7-209ENST00000498509 PKD2Q13563 968 aa11.29□□□□□ -0.6
PHF7-209ENST00000498509 SYAP1Q96A49 352 aaPredicted RBP11.29□□□□□ -0.6
PHF7-209ENST00000498509 RNF216Q9NWF9 866 aaPredicted RBP11.29□□□□□ -0.6
PHF7-209ENST00000498509 CHD1O14646 1710 aa11.29□□□□□ -0.6
PHF7-209ENST00000498509 RARSP54136 660 aaKnown RBP11.29□□□□□ -0.6
PHF7-209ENST00000498509 TMF1P82094 1093 aa11.29□□□□□ -0.6
PHF7-209ENST00000498509 MCTP1Q6DN14 999 aa11.29□□□□□ -0.6
PHF7-209ENST00000498509 TSPY26PQ9H489 355 aa11.29□□□□□ -0.6
PHF7-209ENST00000498509 CFAP74Q9C0B2 1584 aa11.28□□□□□ -0.6
PHF7-209ENST00000498509 PRG4Q92954 1404 aaPredicted RBP11.28□□□□□ -0.6
PHF7-209ENST00000498509 CT47B1P0C2W7 299 aaPredicted RBP11.28□□□□□ -0.6
PHF7-209ENST00000498509 TESK2Q96S53 571 aa11.28□□□□□ -0.6
PHF7-209ENST00000498509 SPINK5Q9NQ38 1064 aaPredicted RBP11.28□□□□□ -0.6
PHF7-209ENST00000498509 FAM53CQ9NYF3 392 aa11.28□□□□□ -0.6
PHF7-209ENST00000498509 MVPQ14764 893 aaKnown RBP11.27□□□□□ -0.61
PHF7-209ENST00000498509 BMP2KLQ5H9B9 411 aa11.27□□□□□ -0.61
PHF7-209ENST00000498509 WDR7Q9Y4E6 1490 aa11.27□□□□□ -0.61
PHF7-209ENST00000498509 DISP3Q9P2K9 1392 aa11.27□□□□□ -0.61
PHF7-209ENST00000498509 RABEP1Q15276 862 aa11.26□□□□□ -0.61
PHF7-209ENST00000498509 KRT222Q8N1A0 295 aa11.26□□□□□ -0.61
PHF7-209ENST00000498509 GAS2L2Q8NHY3 880 aa11.26□□□□□ -0.61
PHF7-209ENST00000498509 CCDC141Q6ZP82 1450 aa11.26□□□□□ -0.61
PHF7-209ENST00000498509 CAPN2P17655 700 aa11.26□□□□□ -0.61
PHF7-209ENST00000498509 GPT2Q8TD30 523 aa11.26□□□□□ -0.61
PHF7-209ENST00000498509 ANKRD36BQ8N2N9 1353 aa11.25□□□□□ -0.61
PHF7-209ENST00000498509 RAD50Q92878 1312 aa11.25□□□□□ -0.61
PHF7-209ENST00000498509 RNF17Q9BXT8 1623 aaKnown RBP11.25□□□□□ -0.61
PHF7-209ENST00000498509 APAF1O14727 1248 aa11.25□□□□□ -0.61
PHF7-209ENST00000498509 RIOK3O14730 519 aaKnown RBP11.25□□□□□ -0.61
PHF7-209ENST00000498509 WDR63Q8IWG1 891 aa11.25□□□□□ -0.61
PHF7-209ENST00000498509 ZNF622Q969S3 477 aaKnown RBP eCLIP11.25□□□□□ -0.61
PHF7-209ENST00000498509 KNSTRNQ9Y448 316 aa11.25□□□□□ -0.61
PHF7-209ENST00000498509 KIAA1524Q8TCG1 905 aa11.24□□□□□ -0.61
PHF7-209ENST00000498509 TMEM63CQ9P1W3 806 aa11.24□□□□□ -0.61
PHF7-209ENST00000498509 CLTCL1P53675 1640 aa11.24□□□□□ -0.61
PHF7-209ENST00000498509 RAPGEF6Q8TEU7 1601 aa11.24□□□□□ -0.61
PHF7-209ENST00000498509 MAGI2Q86UL8 1455 aa11.24□□□□□ -0.61
PHF7-209ENST00000498509 SHANK2Q9UPX8 1470 aa11.24□□□□□ -0.61
PHF7-209ENST00000498509 NCBP1Q09161 790 aaKnown RBP11.23□□□□□ -0.61
PHF7-209ENST00000498509 TSC1Q92574 1164 aa11.23□□□□□ -0.61
PHF7-209ENST00000498509 PLB1Q6P1J6 1458 aa11.23□□□□□ -0.61
PHF7-209ENST00000498509 SYCE3A1L190 88 aa11.23□□□□□ -0.61
PHF7-209ENST00000498509 ARID3CA6NKF2 412 aa11.23□□□□□ -0.61
PHF7-209ENST00000498509 SMTNL1A8MU46 457 aa11.23□□□□□ -0.61
PHF7-209ENST00000498509 NUCB1Q02818 461 aa11.23□□□□□ -0.61
PHF7-209ENST00000498509 KIF18AQ8NI77 898 aa11.23□□□□□ -0.61
PHF7-209ENST00000498509 FEZ2Q9UHY8 353 aaPredicted RBP11.23□□□□□ -0.61
PHF7-209ENST00000498509 TRIM6-TRIM34B2RNG4 842 aa11.22□□□□□ -0.61
PHF7-209ENST00000498509 PRPF40AO75400 957 aaKnown RBP11.22□□□□□ -0.61
PHF7-209ENST00000498509 PSEN1P49768 467 aa11.22□□□□□ -0.61
PHF7-209ENST00000498509 CCDC27Q2M243 656 aa11.22□□□□□ -0.61
PHF7-209ENST00000498509 SLFNL1Q499Z3 407 aa11.22□□□□□ -0.61
PHF7-209ENST00000498509 WWC1Q8IX03 1113 aa11.22□□□□□ -0.61
PHF7-209ENST00000498509 TRIM34Q9BYJ4 488 aa11.22□□□□□ -0.61
PHF7-209ENST00000498509 USP25Q9UHP3 1055 aa11.22□□□□□ -0.61
PHF7-209ENST00000498509 PAXBP1Q9Y5B6 917 aa11.22□□□□□ -0.61
PHF7-209ENST00000498509 ATAD2Q6PL18 1390 aa11.22□□□□□ -0.61
PHF7-209ENST00000498509 NUP153P49790 1475 aaKnown RBP11.22□□□□□ -0.61
PHF7-209ENST00000498509 ANKRD50Q9ULJ7 1429 aa11.22□□□□□ -0.61
PHF7-209ENST00000498509 RLBP1P12271 317 aa11.21□□□□□ -0.61
PHF7-209ENST00000498509 JARID2Q92833 1246 aaPredicted RBP11.21□□□□□ -0.61
PHF7-209ENST00000498509 BRMS1Q9HCU9 246 aa11.21□□□□□ -0.61
PHF7-209ENST00000498509 DDX19BQ9UMR2 479 aa11.21□□□□□ -0.61
PHF7-209ENST00000498509 GOLGA6L6A8MZA4 724 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms