RNA–Protein interactions for RNA: ENST00000498474.2

PUDP-205, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 4

Gene PUDP, Length 1,040 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-205ENST00000498474 ANKRD50Q9ULJ7 1429 aa12.2□□□□□ -0.46
PUDP-205ENST00000498474 PIP4K2BP78356 416 aa12.2□□□□□ -0.46
PUDP-205ENST00000498474 TXNDC2Q86VQ3 553 aa12.2□□□□□ -0.46
PUDP-205ENST00000498474 DDX27Q96GQ7 796 aaKnown RBP12.2□□□□□ -0.46
PUDP-205ENST00000498474 LMTK2Q8IWU2 1503 aa12.2□□□□□ -0.46
PUDP-205ENST00000498474 MYO5BQ9ULV0 1848 aa12.19□□□□□ -0.46
PUDP-205ENST00000498474 EFCAB6Q5THR3 1501 aa12.19□□□□□ -0.46
PUDP-205ENST00000498474 ZNF454Q8N9F8 522 aa12.18□□□□□ -0.46
PUDP-205ENST00000498474 KCNK17Q96T54 332 aa12.18□□□□□ -0.46
PUDP-205ENST00000498474 SCAF11Q99590 1463 aaKnown RBP12.18□□□□□ -0.46
PUDP-205ENST00000498474 ARHGAP23Q9P227 1491 aa12.18□□□□□ -0.46
PUDP-205ENST00000498474 CPS1P31327 1500 aa12.17□□□□□ -0.46
PUDP-205ENST00000498474 MFSD10Q14728 455 aa12.17□□□□□ -0.46
PUDP-205ENST00000498474 DISP3Q9P2K9 1392 aa12.17□□□□□ -0.46
PUDP-205ENST00000498474 SLIT1O75093 1534 aa12.16□□□□□ -0.46
PUDP-205ENST00000498474 NOS1P29475 1434 aa12.16□□□□□ -0.46
PUDP-205ENST00000498474 TMEM2Q9UHN6 1383 aa12.16□□□□□ -0.46
PUDP-205ENST00000498474 ILDR2Q71H61 639 aa12.15□□□□□ -0.46
PUDP-205ENST00000498474 EMILIN3Q9NT22 766 aa12.15□□□□□ -0.46
PUDP-205ENST00000498474 EID1Q9Y6B2 187 aa12.15□□□□□ -0.46
PUDP-205ENST00000498474 ALKQ9UM73 1620 aa12.15□□□□□ -0.47
PUDP-205ENST00000498474 UNC13BO14795 1591 aa12.14□□□□□ -0.47
PUDP-205ENST00000498474 E9PCH4 1651 aa12.14□□□□□ -0.47
PUDP-205ENST00000498474 TET3O43151 1660 aa12.14□□□□□ -0.47
PUDP-205ENST00000498474 HRO43593 1189 aa12.14□□□□□ -0.47
PUDP-205ENST00000498474 EVI5O60447 810 aa12.14□□□□□ -0.47
PUDP-205ENST00000498474 HSPA1LP34931 641 aa12.14□□□□□ -0.47
PUDP-205ENST00000498474 LRRC7Q96NW7 1537 aa12.14□□□□□ -0.47
PUDP-205ENST00000498474 XIRP1Q702N8 1843 aaKnown RBP12.14□□□□□ -0.47
PUDP-205ENST00000498474 GCC2Q8IWJ2 1684 aa12.13□□□□□ -0.47
PUDP-205ENST00000498474 TK2O00142 265 aa12.13□□□□□ -0.47
PUDP-205ENST00000498474 TOM1O60784 492 aa12.13□□□□□ -0.47
PUDP-205ENST00000498474 RBM33Q96EV2 1170 aaKnown RBP12.13□□□□□ -0.47
PUDP-205ENST00000498474 SLC26A8Q96RN1 970 aa12.13□□□□□ -0.47
PUDP-205ENST00000498474 ANO8Q9HCE9 1232 aaPredicted RBP12.13□□□□□ -0.47
PUDP-205ENST00000498474 ADGRB3O60242 1522 aa12.12□□□□□ -0.47
PUDP-205ENST00000498474 FOSBP53539 338 aa12.12□□□□□ -0.47
PUDP-205ENST00000498474 NUTM2DQ5VT03 806 aaPredicted RBP12.12□□□□□ -0.47
PUDP-205ENST00000498474 ROCK1Q13464 1354 aa12.12□□□□□ -0.47
PUDP-205ENST00000498474 KDM5AP29375 1690 aaKnown RBP12.11□□□□□ -0.47
PUDP-205ENST00000498474 NUP155O75694 1391 aa12.11□□□□□ -0.47
PUDP-205ENST00000498474 BCANQ96GW7 911 aa12.11□□□□□ -0.47
PUDP-205ENST00000498474 MAP3K9P80192 1104 aa12.1□□□□□ -0.47
PUDP-205ENST00000498474 SLC52A1Q9NWF4 448 aa12.1□□□□□ -0.47
PUDP-205ENST00000498474 IQGAP3Q86VI3 1631 aa12.1□□□□□ -0.47
PUDP-205ENST00000498474 RPRD2Q5VT52 1461 aaKnown RBP12.09□□□□□ -0.47
PUDP-205ENST00000498474 TMEM131LA2VDJ0 1609 aa12.09□□□□□ -0.47
PUDP-205ENST00000498474 BCL2L12Q9HB09 334 aa12.09□□□□□ -0.47
PUDP-205ENST00000498474 BBXQ8WY36 941 aaPredicted RBP12.08□□□□□ -0.48
PUDP-205ENST00000498474 VPS9D1Q9Y2B5 631 aa12.08□□□□□ -0.48
PUDP-205ENST00000498474 RRBP1Q9P2E9 1410 aaKnown RBP12.07□□□□□ -0.48
PUDP-205ENST00000498474 RIMS2Q9UQ26 1411 aa12.07□□□□□ -0.48
PUDP-205ENST00000498474 ZFYVE9O95405 1425 aa12.06□□□□□ -0.48
PUDP-205ENST00000498474 PPP1R15AO75807 674 aaPredicted RBP12.06□□□□□ -0.48
PUDP-205ENST00000498474 ADAM33Q9BZ11 813 aa12.06□□□□□ -0.48
PUDP-205ENST00000498474 PROSER2Q86WR7 435 aaPredicted RBP12.05□□□□□ -0.48
PUDP-205ENST00000498474 RTN4Q9NQC3 1192 aaKnown RBP12.05□□□□□ -0.48
PUDP-205ENST00000498474 TMEM94Q12767 1356 aa12.05□□□□□ -0.48
PUDP-205ENST00000498474 KCNA6P17658 529 aa12.04□□□□□ -0.48
PUDP-205ENST00000498474 SPHKAPQ2M3C7 1700 aa12.03□□□□□ -0.48
PUDP-205ENST00000498474 CHD2O14647 1828 aaKnown RBP12.03□□□□□ -0.48
PUDP-205ENST00000498474 PTPREP23469 700 aa12.03□□□□□ -0.48
PUDP-205ENST00000498474 ZDHHC16Q969W1 377 aa12.03□□□□□ -0.48
PUDP-205ENST00000498474 KCTD12Q96CX2 325 aaKnown RBP12.03□□□□□ -0.48
PUDP-205ENST00000498474 NAIPQ13075 1403 aa12.03□□□□□ -0.48
PUDP-205ENST00000498474 HCSTQ9UBK5 93 aa12.02□□□□□ -0.49
PUDP-205ENST00000498474 PLEKHG1Q9ULL1 1385 aa12.02□□□□□ -0.49
PUDP-205ENST00000498474 MED1Q15648 1581 aaPredicted RBP12.01□□□□□ -0.49
PUDP-205ENST00000498474 PCDHGA10Q9Y5H3 936 aa12.01□□□□□ -0.49
PUDP-205ENST00000498474 TRIM52Q96A61 297 aa12□□□□□ -0.49
PUDP-205ENST00000498474 STAC3Q96MF2 364 aa12□□□□□ -0.49
PUDP-205ENST00000498474 NWD1Q149M9 1564 aa12□□□□□ -0.49
PUDP-205ENST00000498474 CAMK2BQ13554 666 aa11.99□□□□□ -0.49
PUDP-205ENST00000498474 ZNF326Q5BKZ1 582 aaKnown RBP11.99□□□□□ -0.49
PUDP-205ENST00000498474 AMER1Q5JTC6 1135 aaPredicted RBP11.99□□□□□ -0.49
PUDP-205ENST00000498474 ZBED2Q9BTP6 218 aa11.99□□□□□ -0.49
PUDP-205ENST00000498474 ADAMTS13Q76LX8 1427 aa11.99□□□□□ -0.49
PUDP-205ENST00000498474 CLTCL1P53675 1640 aa11.99□□□□□ -0.49
PUDP-205ENST00000498474 HDGFP51858 240 aaKnown RBP11.98□□□□□ -0.49
PUDP-205ENST00000498474 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.98□□□□□ -0.49
PUDP-205ENST00000498474 ROBO1Q9Y6N7 1651 aa11.97□□□□□ -0.49
PUDP-205ENST00000498474 DPYSL4O14531 572 aa11.97□□□□□ -0.49
PUDP-205ENST00000498474 SLC4A5Q9BY07 1137 aa11.97□□□□□ -0.49
PUDP-205ENST00000498474 TBX22Q9Y458 520 aa11.97□□□□□ -0.49
PUDP-205ENST00000498474 NKTRP30414 1462 aaKnown RBP11.96□□□□□ -0.49
PUDP-205ENST00000498474 PTPRUQ92729 1446 aa11.96□□□□□ -0.49
PUDP-205ENST00000498474 BHMG1C9JSJ3 638 aaPredicted RBP11.96□□□□□ -0.49
PUDP-205ENST00000498474 SPRYD3Q8NCJ5 442 aa11.96□□□□□ -0.49
PUDP-205ENST00000498474 NRXN3Q9Y4C0 1643 aa11.96□□□□□ -0.5
PUDP-205ENST00000498474 KIF1BO60333 1816 aa11.95□□□□□ -0.5
PUDP-205ENST00000498474 SOCS7O14512 581 aa11.95□□□□□ -0.5
PUDP-205ENST00000498474 PLA2G2EQ9NZK7 142 aa11.95□□□□□ -0.5
PUDP-205ENST00000498474 HFM1A2PYH4 1435 aa11.94□□□□□ -0.5
PUDP-205ENST00000498474 MSH6P52701 1360 aa11.94□□□□□ -0.5
PUDP-205ENST00000498474 C14orf37Q86TY3 774 aa11.94□□□□□ -0.5
PUDP-205ENST00000498474 AMOTL2Q9Y2J4 779 aa11.94□□□□□ -0.5
PUDP-205ENST00000498474 FAM135BQ49AJ0 1406 aa11.94□□□□□ -0.5
PUDP-205ENST00000498474 TRPM2O94759 1503 aa11.93□□□□□ -0.5
PUDP-205ENST00000498474 COL9A1P20849 921 aa11.93□□□□□ -0.5
PUDP-205ENST00000498474 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms