RNA–Protein interactions for RNA: ENST00000498434.1

RTCB-206, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 4

Gene RTCB, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-206ENST00000498434 MRS2Q9HD23 443 aa11.34□□□□□ -0.59
RTCB-206ENST00000498434 CFAP65Q6ZU64 1925 aaKnown RBP11.34□□□□□ -0.59
RTCB-206ENST00000498434 PUS7Q96PZ0 661 aaKnown RBP11.33□□□□□ -0.6
RTCB-206ENST00000498434 GPR153Q6NV75 609 aa11.32□□□□□ -0.6
RTCB-206ENST00000498434 SPATA31D1Q6ZQQ2 1576 aa11.32□□□□□ -0.6
RTCB-206ENST00000498434 MYBBP1AQ9BQG0 1328 aaKnown RBP11.32□□□□□ -0.6
RTCB-206ENST00000498434 CENPJQ9HC77 1338 aaPredicted RBP11.32□□□□□ -0.6
RTCB-206ENST00000498434 SIGLEC1Q9BZZ2 1709 aa11.32□□□□□ -0.6
RTCB-206ENST00000498434 BRD4O60885 1362 aaPredicted RBP11.31□□□□□ -0.6
RTCB-206ENST00000498434 NEXMIFQ5QGS0 1516 aa11.31□□□□□ -0.6
RTCB-206ENST00000498434 CLTCQ00610 1675 aaKnown RBP11.31□□□□□ -0.6
RTCB-206ENST00000498434 TMEM92Q6UXU6 159 aa11.31□□□□□ -0.6
RTCB-206ENST00000498434 TMC1Q8TDI8 760 aa11.31□□□□□ -0.6
RTCB-206ENST00000498434 KNSTRNQ9Y448 316 aa11.31□□□□□ -0.6
RTCB-206ENST00000498434 TMEM131LA2VDJ0 1609 aa11.31□□□□□ -0.6
RTCB-206ENST00000498434 MYO3AQ8NEV4 1616 aa11.31□□□□□ -0.6
RTCB-206ENST00000498434 DISP3Q9P2K9 1392 aa11.3□□□□□ -0.6
RTCB-206ENST00000498434 GTF3C3Q9Y5Q9 886 aa11.3□□□□□ -0.6
RTCB-206ENST00000498434 KDM5AP29375 1690 aaKnown RBP11.3□□□□□ -0.6
RTCB-206ENST00000498434 ZMYM3Q14202 1370 aa11.29□□□□□ -0.6
RTCB-206ENST00000498434 MLECQ14165 292 aa11.29□□□□□ -0.6
RTCB-206ENST00000498434 NLRP13Q86W25 1043 aa11.29□□□□□ -0.6
RTCB-206ENST00000498434 LMTK3Q96Q04 1460 aa11.29□□□□□ -0.6
RTCB-206ENST00000498434 MICALL2Q8IY33 904 aa11.28□□□□□ -0.6
RTCB-206ENST00000498434 PANK3Q9H999 370 aa11.28□□□□□ -0.6
RTCB-206ENST00000498434 NPC1L1Q9UHC9 1359 aa11.28□□□□□ -0.6
RTCB-206ENST00000498434 HNRNPUQ00839 825 aaKnown RBP eCLIP11.27□□□□□ -0.61
RTCB-206ENST00000498434 EVC2Q86UK5 1308 aa11.27□□□□□ -0.61
RTCB-206ENST00000498434 FBXO31Q5XUX0 539 aaPredicted RBP11.26□□□□□ -0.61
RTCB-206ENST00000498434 EFCAB3Q8N7B9 438 aa11.26□□□□□ -0.61
RTCB-206ENST00000498434 PARD3Q8TEW0 1356 aa11.26□□□□□ -0.61
RTCB-206ENST00000498434 TNRQ92752 1358 aa11.26□□□□□ -0.61
RTCB-206ENST00000498434 NINLQ9Y2I6 1382 aa11.26□□□□□ -0.61
RTCB-206ENST00000498434 ADGRB1O14514 1584 aa11.25□□□□□ -0.61
RTCB-206ENST00000498434 PER1O15534 1290 aaPredicted RBP11.25□□□□□ -0.61
RTCB-206ENST00000498434 NEFLP07196 543 aa11.25□□□□□ -0.61
RTCB-206ENST00000498434 FAM9BQ8IZU0 186 aa11.25□□□□□ -0.61
RTCB-206ENST00000498434 TRAK1Q9UPV9 953 aa11.25□□□□□ -0.61
RTCB-206ENST00000498434 INSRP06213 1382 aa11.25□□□□□ -0.61
RTCB-206ENST00000498434 A2ML1A8K2U0 1454 aa11.25□□□□□ -0.61
RTCB-206ENST00000498434 NLRP1Q9C000 1473 aa11.25□□□□□ -0.61
RTCB-206ENST00000498434 RIMS2Q9UQ26 1411 aa11.24□□□□□ -0.61
RTCB-206ENST00000498434 ZBED9Q6R2W3 1325 aa11.23□□□□□ -0.61
RTCB-206ENST00000498434 ANKRD13DQ6ZTN6 518 aa11.22□□□□□ -0.61
RTCB-206ENST00000498434 ASXL1Q8IXJ9 1541 aa11.22□□□□□ -0.61
RTCB-206ENST00000498434 QRICH2Q9H0J4 1663 aa11.22□□□□□ -0.61
RTCB-206ENST00000498434 POGKQ9P215 609 aa11.22□□□□□ -0.61
RTCB-206ENST00000498434 TMEM132EQ6IEE7 984 aa11.21□□□□□ -0.61
RTCB-206ENST00000498434 CIZ1Q9ULV3 898 aaPredicted RBP11.21□□□□□ -0.61
RTCB-206ENST00000498434 YTHDC2Q9H6S0 1430 aaKnown RBP11.2□□□□□ -0.62
RTCB-206ENST00000498434 ATAD2Q6PL18 1390 aa11.2□□□□□ -0.62
RTCB-206ENST00000498434 PNISRQ8TF01 805 aaKnown RBP11.2□□□□□ -0.62
RTCB-206ENST00000498434 SPOCK2Q92563 424 aa11.2□□□□□ -0.62
RTCB-206ENST00000498434 SIRT1Q96EB6 747 aa11.2□□□□□ -0.62
RTCB-206ENST00000498434 EID1Q9Y6B2 187 aa11.2□□□□□ -0.62
RTCB-206ENST00000498434 MYO5BQ9ULV0 1848 aa11.2□□□□□ -0.62
RTCB-206ENST00000498434 ALKQ9UM73 1620 aa11.2□□□□□ -0.62
RTCB-206ENST00000498434 LSM11P83369 360 aaKnown RBP eCLIP11.19□□□□□ -0.62
RTCB-206ENST00000498434 CC2D1BQ5T0F9 858 aaKnown RBP11.19□□□□□ -0.62
RTCB-206ENST00000498434 DLC1Q96QB1 1528 aa11.19□□□□□ -0.62
RTCB-206ENST00000498434 ARHGEF28Q8N1W1 1705 aaKnown RBP11.18□□□□□ -0.62
RTCB-206ENST00000498434 NSD2O96028 1365 aa11.18□□□□□ -0.62
RTCB-206ENST00000498434 LRPPRCP42704 1394 aaKnown RBP11.18□□□□□ -0.62
RTCB-206ENST00000498434 CNGB1Q14028 1251 aaPredicted RBP11.18□□□□□ -0.62
RTCB-206ENST00000498434 ARSIQ5FYB1 569 aa11.18□□□□□ -0.62
RTCB-206ENST00000498434 NUTM2DQ5VT03 806 aaPredicted RBP11.18□□□□□ -0.62
RTCB-206ENST00000498434 ABCC11Q96J66 1382 aa11.17□□□□□ -0.62
RTCB-206ENST00000498434 TMEM2Q9UHN6 1383 aa11.17□□□□□ -0.62
RTCB-206ENST00000498434 CGNL1Q0VF96 1302 aa11.17□□□□□ -0.62
RTCB-206ENST00000498434 SOCS7O14512 581 aa11.17□□□□□ -0.62
RTCB-206ENST00000498434 AMER1Q5JTC6 1135 aaPredicted RBP11.17□□□□□ -0.62
RTCB-206ENST00000498434 THEMISQ8N1K5 641 aaPredicted RBP11.17□□□□□ -0.62
RTCB-206ENST00000498434 TERF2IPQ9NYB0 399 aa11.17□□□□□ -0.62
RTCB-206ENST00000498434 WDR43Q15061 677 aaKnown RBP eCLIP11.16□□□□□ -0.62
RTCB-206ENST00000498434 CCDC184Q52MB2 194 aa11.16□□□□□ -0.62
RTCB-206ENST00000498434 BCANQ96GW7 911 aa11.16□□□□□ -0.62
RTCB-206ENST00000498434 STK26Q9P289 416 aa11.16□□□□□ -0.62
RTCB-206ENST00000498434 MYOM1P52179 1685 aa11.16□□□□□ -0.62
RTCB-206ENST00000498434 FER1L4A9Z1Z3 1794 aa11.16□□□□□ -0.62
RTCB-206ENST00000498434 ANKRD36BQ8N2N9 1353 aa11.16□□□□□ -0.62
RTCB-206ENST00000498434 SRPK2P78362 688 aaKnown RBP11.15□□□□□ -0.62
RTCB-206ENST00000498434 PDE3BQ13370 1112 aa11.15□□□□□ -0.62
RTCB-206ENST00000498434 ERICH6BQ5W0A0 696 aa11.15□□□□□ -0.62
RTCB-206ENST00000498434 NGEFQ8N5V2 710 aa11.15□□□□□ -0.62
RTCB-206ENST00000498434 PRAM1Q96QH2 718 aa11.15□□□□□ -0.62
RTCB-206ENST00000498434 HDGFL2Q7Z4V5 671 aaPredicted RBP11.14□□□□□ -0.63
RTCB-206ENST00000498434 MS4A4AQ96JQ5 239 aa11.14□□□□□ -0.63
RTCB-206ENST00000498434 FAM135BQ49AJ0 1406 aa11.14□□□□□ -0.63
RTCB-206ENST00000498434 PLEKHG1Q9ULL1 1385 aa11.14□□□□□ -0.63
RTCB-206ENST00000498434 USP32Q8NFA0 1604 aa11.13□□□□□ -0.63
RTCB-206ENST00000498434 PTPRMP28827 1452 aa11.13□□□□□ -0.63
RTCB-206ENST00000498434 UBR1Q8IWV7 1749 aa11.13□□□□□ -0.63
RTCB-206ENST00000498434 PPP2R1AP30153 589 aa11.13□□□□□ -0.63
RTCB-206ENST00000498434 IFNLR1Q8IU57 520 aaPredicted RBP11.13□□□□□ -0.63
RTCB-206ENST00000498434 PLA2G2EQ9NZK7 142 aa11.13□□□□□ -0.63
RTCB-206ENST00000498434 SOX12O15370 315 aa11.12□□□□□ -0.63
RTCB-206ENST00000498434 ILDR2Q71H61 639 aa11.12□□□□□ -0.63
RTCB-206ENST00000498434 MORC1Q86VD1 984 aa11.12□□□□□ -0.63
RTCB-206ENST00000498434 CFAP53Q96M91 514 aa11.12□□□□□ -0.63
RTCB-206ENST00000498434 C3P01024 1663 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms