RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 IRF5Q13568 498 aa6.52□□□□□ -1.37
CALD1-224ENST00000498254 HDGFL1Q5TGJ6 251 aa6.52□□□□□ -1.37
CALD1-224ENST00000498254 EPS8L1Q8TE68 723 aa6.52□□□□□ -1.37
CALD1-224ENST00000498254 TRIM34Q9BYJ4 488 aa6.52□□□□□ -1.37
CALD1-224ENST00000498254 ADAMTS19Q8TE59 1207 aa6.51□□□□□ -1.37
CALD1-224ENST00000498254 SOCS7O14512 581 aa6.5□□□□□ -1.37
CALD1-224ENST00000498254 SLC4A3P48751 1232 aa6.5□□□□□ -1.37
CALD1-224ENST00000498254 TRAIPQ9BWF2 469 aa6.5□□□□□ -1.37
CALD1-224ENST00000498254 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.49□□□□□ -1.37
CALD1-224ENST00000498254 GPR37L1O60883 481 aa6.49□□□□□ -1.37
CALD1-224ENST00000498254 RANGAP1P46060 587 aaPredicted RBP6.49□□□□□ -1.37
CALD1-224ENST00000498254 SLF2Q8IX21 1173 aa6.49□□□□□ -1.37
CALD1-224ENST00000498254 COPS2P61201 443 aa6.48□□□□□ -1.37
CALD1-224ENST00000498254 NR6A1Q15406 480 aa6.48□□□□□ -1.37
CALD1-224ENST00000498254 PUS10Q3MIT2 529 aaKnown RBP6.48□□□□□ -1.37
CALD1-224ENST00000498254 GRIPAP1Q4V328 841 aa6.48□□□□□ -1.37
CALD1-224ENST00000498254 PKDCCQ504Y2 493 aa6.48□□□□□ -1.37
CALD1-224ENST00000498254 NPM2Q86SE8 214 aaKnown RBP6.48□□□□□ -1.37
CALD1-224ENST00000498254 KCTD17Q8N5Z5 321 aa6.48□□□□□ -1.37
CALD1-224ENST00000498254 PRR7Q8TB68 274 aa6.48□□□□□ -1.37
CALD1-224ENST00000498254 CCDC9Q9Y3X0 531 aaKnown RBP6.48□□□□□ -1.37
CALD1-224ENST00000498254 PER1O15534 1290 aaPredicted RBP6.47□□□□□ -1.37
CALD1-224ENST00000498254 ZPR1O75312 459 aa6.47□□□□□ -1.37
CALD1-224ENST00000498254 ATP6V1AP38606 617 aa6.47□□□□□ -1.37
CALD1-224ENST00000498254 WASHC4Q2M389 1173 aa6.47□□□□□ -1.37
CALD1-224ENST00000498254 ACIN1Q9UKV3 1341 aaKnown RBP6.47□□□□□ -1.37
CALD1-224ENST00000498254 BTBD11A6QL63 1104 aa6.46□□□□□ -1.38
CALD1-224ENST00000498254 CARNS1A5YM72 827 aa6.45□□□□□ -1.38
CALD1-224ENST00000498254 PPP1R15AO75807 674 aaPredicted RBP6.45□□□□□ -1.38
CALD1-224ENST00000498254 SLC19A1P41440 591 aa6.45□□□□□ -1.38
CALD1-224ENST00000498254 KMT5BQ4FZB7 885 aa6.45□□□□□ -1.38
CALD1-224ENST00000498254 CFAP70Q5T0N1 1121 aa6.45□□□□□ -1.38
CALD1-224ENST00000498254 TRIM67Q6ZTA4 783 aa6.45□□□□□ -1.38
CALD1-224ENST00000498254 PBXIP1Q96AQ6 731 aa6.45□□□□□ -1.38
CALD1-224ENST00000498254 LMOD1P29536 600 aaPredicted RBP6.44□□□□□ -1.38
CALD1-224ENST00000498254 MYT1Q01538 1121 aa6.44□□□□□ -1.38
CALD1-224ENST00000498254 CDCA8Q53HL2 280 aa6.44□□□□□ -1.38
CALD1-224ENST00000498254 PRR14Q9BWN1 585 aa6.44□□□□□ -1.38
CALD1-224ENST00000498254 PPP1R12CQ9BZL4 782 aa6.44□□□□□ -1.38
CALD1-224ENST00000498254 SLC27A5Q9Y2P5 690 aa6.44□□□□□ -1.38
CALD1-224ENST00000498254 RNF223E7ERA6 249 aa6.43□□□□□ -1.38
CALD1-224ENST00000498254 DGAT1O75907 488 aa6.43□□□□□ -1.38
CALD1-224ENST00000498254 MORN1Q5T089 497 aa6.43□□□□□ -1.38
CALD1-224ENST00000498254 PALM3A6NDB9 673 aaPredicted RBP6.42□□□□□ -1.38
CALD1-224ENST00000498254 NFX1Q12986 1120 aaKnown RBP6.42□□□□□ -1.38
CALD1-224ENST00000498254 LCE3BQ5TA77 95 aa6.42□□□□□ -1.38
CALD1-224ENST00000498254 RNF19BQ6ZMZ0 732 aa6.42□□□□□ -1.38
CALD1-224ENST00000498254 RETREG3Q86VR2 466 aa6.42□□□□□ -1.38
CALD1-224ENST00000498254 UCN2Q96RP3 112 aa6.42□□□□□ -1.38
CALD1-224ENST00000498254 GZF1Q9H116 711 aaPredicted RBP6.42□□□□□ -1.38
CALD1-224ENST00000498254 ALG2Q9H553 416 aa6.42□□□□□ -1.38
CALD1-224ENST00000498254 PCDHB3Q9Y5E6 796 aa6.42□□□□□ -1.38
CALD1-224ENST00000498254 CSB-PGBD3P0DP91 1061 aa6.41□□□□□ -1.38
CALD1-224ENST00000498254 SEMA3FQ13275 785 aa6.41□□□□□ -1.38
CALD1-224ENST00000498254 SPRYD7Q5W111 196 aa6.41□□□□□ -1.38
CALD1-224ENST00000498254 BLOC1S3Q6QNY0 202 aa6.41□□□□□ -1.38
CALD1-224ENST00000498254 EMID1Q96A84 441 aaPredicted RBP6.41□□□□□ -1.38
CALD1-224ENST00000498254 TFIP11Q9UBB9 837 aaKnown RBP6.41□□□□□ -1.38
CALD1-224ENST00000498254 PRR20EP86478 221 aa6.4□□□□□ -1.38
CALD1-224ENST00000498254 PRR20CP86479 221 aa6.4□□□□□ -1.38
CALD1-224ENST00000498254 PRR20DP86480 221 aa6.4□□□□□ -1.38
CALD1-224ENST00000498254 PRR20BP86481 221 aa6.4□□□□□ -1.38
CALD1-224ENST00000498254 PRR20AP86496 221 aa6.4□□□□□ -1.38
CALD1-224ENST00000498254 ZNF598Q86UK7 904 aaKnown RBP6.4□□□□□ -1.38
CALD1-224ENST00000498254 ACTN4O43707 911 aaKnown RBP6.39□□□□□ -1.39
CALD1-224ENST00000498254 Q3C1V9 767 aa6.39□□□□□ -1.39
CALD1-224ENST00000498254 TBC1D9Q6ZT07 1266 aa6.39□□□□□ -1.39
CALD1-224ENST00000498254 ANKLE1Q8NAG6 615 aa6.39□□□□□ -1.39
CALD1-224ENST00000498254 TMCO4Q5TGY1 634 aa6.38□□□□□ -1.39
CALD1-224ENST00000498254 PNMA1Q8ND90 353 aa6.38□□□□□ -1.39
CALD1-224ENST00000498254 MAP10Q9P2G4 905 aa6.38□□□□□ -1.39
CALD1-224ENST00000498254 FBXO45P0C2W1 286 aa6.37□□□□□ -1.39
CALD1-224ENST00000498254 SRPK2P78362 688 aaKnown RBP6.37□□□□□ -1.39
CALD1-224ENST00000498254 LYPD8Q6UX82 237 aa6.37□□□□□ -1.39
CALD1-224ENST00000498254 LIAT1Q6ZQX7 453 aa6.37□□□□□ -1.39
CALD1-224ENST00000498254 USB1Q9BQ65 265 aaKnown RBP6.37□□□□□ -1.39
CALD1-224ENST00000498254 MAFBQ9Y5Q3 323 aaPredicted RBP6.37□□□□□ -1.39
CALD1-224ENST00000498254 PIK3CDO00329 1044 aa6.36□□□□□ -1.39
CALD1-224ENST00000498254 TLL1O43897 1013 aa6.36□□□□□ -1.39
CALD1-224ENST00000498254 CTHP32929 405 aa6.36□□□□□ -1.39
CALD1-224ENST00000498254 SOX11P35716 441 aa6.36□□□□□ -1.39
CALD1-224ENST00000498254 EIF4G2P78344 907 aaKnown RBP eCLIP6.36□□□□□ -1.39
CALD1-224ENST00000498254 PDE4CQ08493 712 aa6.36□□□□□ -1.39
CALD1-224ENST00000498254 ZNF697Q5TEC3 545 aa6.36□□□□□ -1.39
CALD1-224ENST00000498254 FAM187AA6NFU0 413 aa6.35□□□□□ -1.39
CALD1-224ENST00000498254 PPEF1O14829 653 aaPredicted RBP6.35□□□□□ -1.39
CALD1-224ENST00000498254 GDF9O60383 454 aa6.35□□□□□ -1.39
CALD1-224ENST00000498254 S1PR4O95977 384 aa6.35□□□□□ -1.39
CALD1-224ENST00000498254 NR1H3Q13133 447 aa6.35□□□□□ -1.39
CALD1-224ENST00000498254 DESI1Q6ICB0 168 aa6.35□□□□□ -1.39
CALD1-224ENST00000498254 FKBPLQ9UIM3 349 aa6.35□□□□□ -1.39
CALD1-224ENST00000498254 USTQ9Y2C2 406 aa6.35□□□□□ -1.39
CALD1-224ENST00000498254 TNFRSF10AO00220 468 aa6.34□□□□□ -1.39
CALD1-224ENST00000498254 ATP9BO43861 1147 aa6.34□□□□□ -1.39
CALD1-224ENST00000498254 MFAP1P55081 439 aaKnown RBP6.34□□□□□ -1.39
CALD1-224ENST00000498254 SCUBE3Q8IX30 993 aa6.34□□□□□ -1.39
CALD1-224ENST00000498254 ZBBXA8MT70 800 aa6.33□□□□□ -1.4
CALD1-224ENST00000498254 FMNL1O95466 1100 aaPredicted RBP6.33□□□□□ -1.4
CALD1-224ENST00000498254 JUNDP17535 347 aa6.33□□□□□ -1.4
CALD1-224ENST00000498254 BRICD5Q6PL45 260 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms