RNA–Protein interactions for RNA: ENST00000498219.5

HPS1-214, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 5

Gene HPS1, Length 845 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-214ENST00000498219 SBNO2Q9Y2G9 1366 aa20.79■□□□□ 0.92
HPS1-214ENST00000498219 USP47Q96K76 1375 aa20.77■□□□□ 0.92
HPS1-214ENST00000498219 CRYBG1Q9Y4K1 1723 aa20.77■□□□□ 0.92
HPS1-214ENST00000498219 AKAP12Q02952 1782 aa20.75■□□□□ 0.91
HPS1-214ENST00000498219 SOCS7O14512 581 aa20.75■□□□□ 0.91
HPS1-214ENST00000498219 TESK2Q96S53 571 aa20.75■□□□□ 0.91
HPS1-214ENST00000498219 USP21Q9UK80 565 aa20.75■□□□□ 0.91
HPS1-214ENST00000498219 QTRT2Q9H974 415 aaKnown RBP20.74■□□□□ 0.91
HPS1-214ENST00000498219 ATAD2Q6PL18 1390 aa20.73■□□□□ 0.91
HPS1-214ENST00000498219 FNBP4Q8N3X1 1017 aaPredicted RBP20.73■□□□□ 0.91
HPS1-214ENST00000498219 USP6P35125 1406 aa20.72■□□□□ 0.91
HPS1-214ENST00000498219 PHRF1Q9P1Y6 1649 aaKnown RBP20.72■□□□□ 0.91
HPS1-214ENST00000498219 PLCH1Q4KWH8 1693 aa20.72■□□□□ 0.91
HPS1-214ENST00000498219 RXRBP28702 533 aa20.71■□□□□ 0.91
HPS1-214ENST00000498219 ABTB2Q8N961 1025 aa20.71■□□□□ 0.91
HPS1-214ENST00000498219 TMC1Q8TDI8 760 aa20.71■□□□□ 0.91
HPS1-214ENST00000498219 BCL9LQ86UU0 1499 aa20.7■□□□□ 0.9
HPS1-214ENST00000498219 FAM83GA6ND36 823 aa20.69■□□□□ 0.9
HPS1-214ENST00000498219 SLC12A5Q9H2X9 1139 aa20.69■□□□□ 0.9
HPS1-214ENST00000498219 SLIT2O94813 1529 aa20.68■□□□□ 0.9
HPS1-214ENST00000498219 MON2Q7Z3U7 1717 aa20.68■□□□□ 0.9
HPS1-214ENST00000498219 PIK3C2AO00443 1686 aa20.67■□□□□ 0.9
HPS1-214ENST00000498219 ATRNO75882 1429 aa20.67■□□□□ 0.9
HPS1-214ENST00000498219 SSH2Q76I76 1423 aa20.67■□□□□ 0.9
HPS1-214ENST00000498219 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.67■□□□□ 0.9
HPS1-214ENST00000498219 TRPC5Q9UL62 973 aaPredicted RBP20.66■□□□□ 0.9
HPS1-214ENST00000498219 KTN1Q86UP2 1357 aaKnown RBP20.66■□□□□ 0.9
HPS1-214ENST00000498219 CPSF1Q10570 1443 aaKnown RBP20.66■□□□□ 0.9
HPS1-214ENST00000498219 CD163L1Q9NR16 1453 aa20.66■□□□□ 0.9
HPS1-214ENST00000498219 NRKQ7Z2Y5 1582 aa20.66■□□□□ 0.9
HPS1-214ENST00000498219 COL14A1Q05707 1796 aaKnown RBP20.65■□□□□ 0.9
HPS1-214ENST00000498219 NWD2Q9ULI1 1742 aa20.65■□□□□ 0.9
HPS1-214ENST00000498219 TTC21BQ7Z4L5 1316 aa20.65■□□□□ 0.9
HPS1-214ENST00000498219 ZC3H6P61129 1189 aaKnown RBP20.65■□□□□ 0.9
HPS1-214ENST00000498219 RBM6P78332 1123 aaKnown RBP20.65■□□□□ 0.9
HPS1-214ENST00000498219 UNC5CLQ8IV45 518 aa20.65■□□□□ 0.9
HPS1-214ENST00000498219 BRD4O60885 1362 aaPredicted RBP20.64■□□□□ 0.89
HPS1-214ENST00000498219 ZNF692Q9BU19 519 aaPredicted RBP20.64■□□□□ 0.89
HPS1-214ENST00000498219 KIAA0232Q92628 1395 aa20.63■□□□□ 0.89
HPS1-214ENST00000498219 NLRP6P59044 892 aa20.63■□□□□ 0.89
HPS1-214ENST00000498219 TMF1P82094 1093 aa20.63■□□□□ 0.89
HPS1-214ENST00000498219 CHRNA2Q15822 529 aa20.63■□□□□ 0.89
HPS1-214ENST00000498219 NRAPQ86VF7 1730 aa20.63■□□□□ 0.89
HPS1-214ENST00000498219 USP19O94966 1318 aa20.62■□□□□ 0.89
HPS1-214ENST00000498219 NLRP13Q86W25 1043 aa20.62■□□□□ 0.89
HPS1-214ENST00000498219 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.62■□□□□ 0.89
HPS1-214ENST00000498219 PRDM11Q9NQV5 511 aa20.62■□□□□ 0.89
HPS1-214ENST00000498219 RGS12O14924 1447 aa20.61■□□□□ 0.89
HPS1-214ENST00000498219 PUS7Q96PZ0 661 aaKnown RBP20.61■□□□□ 0.89
HPS1-214ENST00000498219 BTG4Q9NY30 223 aa20.61■□□□□ 0.89
HPS1-214ENST00000498219 HDGFL2Q7Z4V5 671 aaPredicted RBP20.6■□□□□ 0.89
HPS1-214ENST00000498219 ZRANB1Q9UGI0 708 aa20.6■□□□□ 0.89
HPS1-214ENST00000498219 A0A1W2PP64 1363 aa20.59■□□□□ 0.89
HPS1-214ENST00000498219 GLI3P10071 1580 aa20.59■□□□□ 0.89
HPS1-214ENST00000498219 ZBTB7CA1YPR0 619 aa20.59■□□□□ 0.89
HPS1-214ENST00000498219 HSPA5P11021 654 aaKnown RBP20.59■□□□□ 0.89
HPS1-214ENST00000498219 GJD4Q96KN9 370 aaPredicted RBP20.59■□□□□ 0.89
HPS1-214ENST00000498219 CDK12Q9NYV4 1490 aaPredicted RBP20.58■□□□□ 0.89
HPS1-214ENST00000498219 SLC24A1O60721 1099 aa20.58■□□□□ 0.89
HPS1-214ENST00000498219 GCP02774 474 aa20.58■□□□□ 0.89
HPS1-214ENST00000498219 CCDC9Q9Y3X0 531 aaKnown RBP20.58■□□□□ 0.89
HPS1-214ENST00000498219 SLIT3O75094 1523 aa20.58■□□□□ 0.88
HPS1-214ENST00000498219 TTC21AQ8NDW8 1320 aa20.57■□□□□ 0.88
HPS1-214ENST00000498219 SOX12O15370 315 aa20.57■□□□□ 0.88
HPS1-214ENST00000498219 NME9Q86XW9 330 aa20.57■□□□□ 0.88
HPS1-214ENST00000498219 TERF2IPQ9NYB0 399 aa20.57■□□□□ 0.88
HPS1-214ENST00000498219 EIF4G2P78344 907 aaKnown RBP eCLIP20.56■□□□□ 0.88
HPS1-214ENST00000498219 VPS72Q15906 364 aa20.56■□□□□ 0.88
HPS1-214ENST00000498219 MYOM1P52179 1685 aa20.54■□□□□ 0.88
HPS1-214ENST00000498219 POLR3GLQ9BT43 218 aa20.54■□□□□ 0.88
HPS1-214ENST00000498219 STRN4Q9NRL3 753 aa20.54■□□□□ 0.88
HPS1-214ENST00000498219 EDC4Q6P2E9 1401 aaKnown RBP20.53■□□□□ 0.88
HPS1-214ENST00000498219 CPDO75976 1380 aa20.53■□□□□ 0.88
HPS1-214ENST00000498219 NINLQ9Y2I6 1382 aa20.53■□□□□ 0.88
HPS1-214ENST00000498219 LMO7Q8WWI1 1683 aa20.52■□□□□ 0.88
HPS1-214ENST00000498219 CAMTA1Q9Y6Y1 1673 aa20.52■□□□□ 0.88
HPS1-214ENST00000498219 BRWD3Q6RI45 1802 aa20.52■□□□□ 0.88
HPS1-214ENST00000498219 CDCA8Q53HL2 280 aa20.51■□□□□ 0.87
HPS1-214ENST00000498219 RGPD5Q99666 1765 aa20.51■□□□□ 0.87
HPS1-214ENST00000498219 USP54Q70EL1 1684 aa20.51■□□□□ 0.87
HPS1-214ENST00000498219 ANKRD36BQ8N2N9 1353 aa20.5■□□□□ 0.87
HPS1-214ENST00000498219 COL18A1P39060 1754 aa20.49■□□□□ 0.87
HPS1-214ENST00000498219 USP31Q70CQ4 1352 aa20.49■□□□□ 0.87
HPS1-214ENST00000498219 NFAT5O94916 1531 aa20.49■□□□□ 0.87
HPS1-214ENST00000498219 EVA1CP58658 441 aa20.48■□□□□ 0.87
HPS1-214ENST00000498219 SPATA31A5Q5VU36 1347 aa20.48■□□□□ 0.87
HPS1-214ENST00000498219 SPATA31A7Q8IWB4 1347 aa20.48■□□□□ 0.87
HPS1-214ENST00000498219 FAM98CQ17RN3 349 aaKnown RBP20.47■□□□□ 0.87
HPS1-214ENST00000498219 KCNH5Q8NCM2 988 aa20.47■□□□□ 0.87
HPS1-214ENST00000498219 LTN1O94822 1766 aa20.46■□□□□ 0.87
HPS1-214ENST00000498219 LARP1Q6PKG0 1096 aaKnown RBP20.46■□□□□ 0.87
HPS1-214ENST00000498219 SEPT12Q8IYM1 358 aa20.46■□□□□ 0.87
HPS1-214ENST00000498219 A0A0G2JS52 829 aa20.45■□□□□ 0.86
HPS1-214ENST00000498219 C11orf95C9JLR9 678 aaPredicted RBP20.45■□□□□ 0.86
HPS1-214ENST00000498219 MYT1Q01538 1121 aa20.45■□□□□ 0.86
HPS1-214ENST00000498219 ARHGEF25Q86VW2 580 aa20.45■□□□□ 0.86
HPS1-214ENST00000498219 USP35Q9P2H5 1018 aa20.45■□□□□ 0.86
HPS1-214ENST00000498219 AXIN2Q9Y2T1 843 aa20.45■□□□□ 0.86
HPS1-214ENST00000498219 OVOS2A0A0J9YW53 1432 aa20.44■□□□□ 0.86
HPS1-214ENST00000498219 OVOS2Q6IE36 1432 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 234.8 ms