RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 CCDC125Q86Z20 511 aa16.99■□□□□ 0.31
NUDCD3-211ENST00000497978 CDK19Q9BWU1 502 aa16.99■□□□□ 0.31
NUDCD3-211ENST00000497978 PLCH1Q4KWH8 1693 aa16.99■□□□□ 0.31
NUDCD3-211ENST00000497978 GLI3P10071 1580 aa16.98■□□□□ 0.31
NUDCD3-211ENST00000497978 ALS2Q96Q42 1657 aa16.98■□□□□ 0.31
NUDCD3-211ENST00000497978 FAM83GA6ND36 823 aa16.98■□□□□ 0.31
NUDCD3-211ENST00000497978 NBPF1Q3BBV0 1214 aa16.97■□□□□ 0.31
NUDCD3-211ENST00000497978 ATP7BP35670 1465 aa16.97■□□□□ 0.31
NUDCD3-211ENST00000497978 SEPT12Q8IYM1 358 aa16.95■□□□□ 0.3
NUDCD3-211ENST00000497978 CCDC61Q9Y6R9 512 aa16.95■□□□□ 0.3
NUDCD3-211ENST00000497978 BTG4Q9NY30 223 aa16.94■□□□□ 0.3
NUDCD3-211ENST00000497978 COL14A1Q05707 1796 aaKnown RBP16.93■□□□□ 0.3
NUDCD3-211ENST00000497978 CENPJQ9HC77 1338 aaPredicted RBP16.93■□□□□ 0.3
NUDCD3-211ENST00000497978 A0A0G2JS52 829 aa16.92■□□□□ 0.3
NUDCD3-211ENST00000497978 ZBTB22O15209 634 aa16.92■□□□□ 0.3
NUDCD3-211ENST00000497978 ONECUT3O60422 494 aaPredicted RBP16.92■□□□□ 0.3
NUDCD3-211ENST00000497978 MYT1Q01538 1121 aa16.92■□□□□ 0.3
NUDCD3-211ENST00000497978 PRDM11Q9NQV5 511 aa16.92■□□□□ 0.3
NUDCD3-211ENST00000497978 ACEP12821 1306 aa16.92■□□□□ 0.3
NUDCD3-211ENST00000497978 POLR3AO14802 1390 aaPredicted RBP16.91■□□□□ 0.3
NUDCD3-211ENST00000497978 PLEKHG3A1L390 1219 aa16.91■□□□□ 0.3
NUDCD3-211ENST00000497978 SRPK2P78362 688 aaKnown RBP16.91■□□□□ 0.3
NUDCD3-211ENST00000497978 NBPF8Q3BBV2 869 aa16.91■□□□□ 0.3
NUDCD3-211ENST00000497978 L3MBTL2Q969R5 705 aa16.91■□□□□ 0.3
NUDCD3-211ENST00000497978 BRWD3Q6RI45 1802 aa16.91■□□□□ 0.3
NUDCD3-211ENST00000497978 TOPAZ1Q8N9V7 1692 aa16.91■□□□□ 0.3
NUDCD3-211ENST00000497978 SF3B2Q13435 895 aaKnown RBP16.9■□□□□ 0.3
NUDCD3-211ENST00000497978 KRT27Q7Z3Y8 459 aa16.9■□□□□ 0.3
NUDCD3-211ENST00000497978 ZRANB1Q9UGI0 708 aa16.9■□□□□ 0.3
NUDCD3-211ENST00000497978 NRAPQ86VF7 1730 aa16.9■□□□□ 0.3
NUDCD3-211ENST00000497978 BLMP54132 1417 aaPredicted RBP16.89■□□□□ 0.29
NUDCD3-211ENST00000497978 CRYBG1Q9Y4K1 1723 aa16.89■□□□□ 0.29
NUDCD3-211ENST00000497978 NEUROD1Q13562 356 aa16.88■□□□□ 0.29
NUDCD3-211ENST00000497978 FAM98CQ17RN3 349 aaKnown RBP16.88■□□□□ 0.29
NUDCD3-211ENST00000497978 NUTM2GQ5VZR2 741 aa16.88■□□□□ 0.29
NUDCD3-211ENST00000497978 SIN3AQ96ST3 1273 aa16.88■□□□□ 0.29
NUDCD3-211ENST00000497978 ABTB2Q8N961 1025 aa16.87■□□□□ 0.29
NUDCD3-211ENST00000497978 KIAA0232Q92628 1395 aa16.87■□□□□ 0.29
NUDCD3-211ENST00000497978 PPIP5K1Q6PFW1 1433 aa16.87■□□□□ 0.29
NUDCD3-211ENST00000497978 QRICH2Q9H0J4 1663 aa16.86■□□□□ 0.29
NUDCD3-211ENST00000497978 CABP2Q9NPB3 220 aa16.86■□□□□ 0.29
NUDCD3-211ENST00000497978 SPATA31A5Q5VU36 1347 aa16.86■□□□□ 0.29
NUDCD3-211ENST00000497978 SPATA31A7Q8IWB4 1347 aa16.86■□□□□ 0.29
NUDCD3-211ENST00000497978 ZC3H6P61129 1189 aaKnown RBP16.85■□□□□ 0.29
NUDCD3-211ENST00000497978 FOXD4L1Q9NU39 408 aa16.85■□□□□ 0.29
NUDCD3-211ENST00000497978 PHRF1Q9P1Y6 1649 aaKnown RBP16.85■□□□□ 0.29
NUDCD3-211ENST00000497978 CHRNA2Q15822 529 aa16.84■□□□□ 0.29
NUDCD3-211ENST00000497978 EVC2Q86UK5 1308 aa16.84■□□□□ 0.29
NUDCD3-211ENST00000497978 ROCK2O75116 1388 aaKnown RBP16.84■□□□□ 0.29
NUDCD3-211ENST00000497978 DCAF8L1A6NGE4 600 aa16.83■□□□□ 0.28
NUDCD3-211ENST00000497978 BRD4O60885 1362 aaPredicted RBP16.83■□□□□ 0.28
NUDCD3-211ENST00000497978 TRPM1Q7Z4N2 1603 aa16.83■□□□□ 0.28
NUDCD3-211ENST00000497978 NLRP13Q86W25 1043 aa16.83■□□□□ 0.28
NUDCD3-211ENST00000497978 STRN4Q9NRL3 753 aa16.83■□□□□ 0.28
NUDCD3-211ENST00000497978 EVA1CP58658 441 aa16.82■□□□□ 0.28
NUDCD3-211ENST00000497978 EP400Q96L91 3159 aa16.81■□□□□ 0.28
NUDCD3-211ENST00000497978 DEFB132Q7Z7B7 95 aa16.81■□□□□ 0.28
NUDCD3-211ENST00000497978 CABP1Q9NZU7 370 aa16.81■□□□□ 0.28
NUDCD3-211ENST00000497978 USP19O94966 1318 aa16.8■□□□□ 0.28
NUDCD3-211ENST00000497978 SPATA31A1Q5TZJ5 1347 aa16.8■□□□□ 0.28
NUDCD3-211ENST00000497978 BAG6P46379 1132 aa16.79■□□□□ 0.28
NUDCD3-211ENST00000497978 NRKQ7Z2Y5 1582 aa16.79■□□□□ 0.28
NUDCD3-211ENST00000497978 CPDO75976 1380 aa16.78■□□□□ 0.28
NUDCD3-211ENST00000497978 GCP02774 474 aa16.78■□□□□ 0.28
NUDCD3-211ENST00000497978 THSD7AQ9UPZ6 1657 aa16.78■□□□□ 0.28
NUDCD3-211ENST00000497978 USP6P35125 1406 aa16.78■□□□□ 0.28
NUDCD3-211ENST00000497978 NLRP6P59044 892 aa16.77■□□□□ 0.28
NUDCD3-211ENST00000497978 USP35Q9P2H5 1018 aa16.77■□□□□ 0.28
NUDCD3-211ENST00000497978 SSH2Q76I76 1423 aa16.77■□□□□ 0.27
NUDCD3-211ENST00000497978 FAM182BQ5T319 152 aa16.75■□□□□ 0.27
NUDCD3-211ENST00000497978 BARGINQ6ZT62 677 aa16.75■□□□□ 0.27
NUDCD3-211ENST00000497978 ZNF692Q9BU19 519 aaPredicted RBP16.75■□□□□ 0.27
NUDCD3-211ENST00000497978 CAMTA1Q9Y6Y1 1673 aa16.75■□□□□ 0.27
NUDCD3-211ENST00000497978 ZBTB7CA1YPR0 619 aa16.74■□□□□ 0.27
NUDCD3-211ENST00000497978 LARP1Q6PKG0 1096 aaKnown RBP16.74■□□□□ 0.27
NUDCD3-211ENST00000497978 RGPD1P0DJD0 1748 aa16.73■□□□□ 0.27
NUDCD3-211ENST00000497978 LMO7Q8WWI1 1683 aa16.73■□□□□ 0.27
NUDCD3-211ENST00000497978 SLC4A2P04920 1241 aa16.73■□□□□ 0.27
NUDCD3-211ENST00000497978 FAM196AQ6ZSG2 479 aa16.73■□□□□ 0.27
NUDCD3-211ENST00000497978 TCP11L2Q8N4U5 519 aa16.73■□□□□ 0.27
NUDCD3-211ENST00000497978 TONSLQ96HA7 1378 aa16.73■□□□□ 0.27
NUDCD3-211ENST00000497978 PDE3BQ13370 1112 aa16.72■□□□□ 0.27
NUDCD3-211ENST00000497978 CARD11Q9BXL7 1154 aa16.72■□□□□ 0.27
NUDCD3-211ENST00000497978 THRAP3Q9Y2W1 955 aaKnown RBP16.72■□□□□ 0.27
NUDCD3-211ENST00000497978 SLIT3O75094 1523 aa16.7■□□□□ 0.26
NUDCD3-211ENST00000497978 AATKQ6ZMQ8 1374 aa16.7■□□□□ 0.26
NUDCD3-211ENST00000497978 TTC21BQ7Z4L5 1316 aa16.7■□□□□ 0.26
NUDCD3-211ENST00000497978 TTC21AQ8NDW8 1320 aa16.7■□□□□ 0.26
NUDCD3-211ENST00000497978 COL5A2P05997 1499 aaPredicted RBP16.69■□□□□ 0.26
NUDCD3-211ENST00000497978 SBNO2Q9Y2G9 1366 aa16.69■□□□□ 0.26
NUDCD3-211ENST00000497978 EN1Q05925 392 aaPredicted RBP16.69■□□□□ 0.26
NUDCD3-211ENST00000497978 KCNH5Q8NCM2 988 aa16.69■□□□□ 0.26
NUDCD3-211ENST00000497978 AKAP12Q02952 1782 aa16.69■□□□□ 0.26
NUDCD3-211ENST00000497978 PIK3C2AO00443 1686 aa16.69■□□□□ 0.26
NUDCD3-211ENST00000497978 KTN1Q86UP2 1357 aaKnown RBP16.68■□□□□ 0.26
NUDCD3-211ENST00000497978 TRIM37O94972 964 aa16.68■□□□□ 0.26
NUDCD3-211ENST00000497978 CRB1P82279 1406 aa16.68■□□□□ 0.26
NUDCD3-211ENST00000497978 DISP2A7MBM2 1401 aa16.67■□□□□ 0.26
NUDCD3-211ENST00000497978 CPSF1Q10570 1443 aaKnown RBP16.67■□□□□ 0.26
NUDCD3-211ENST00000497978 TOM1L2Q6ZVM7 507 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms