RNA–Protein interactions for RNA: ENST00000497871.1

ATPAF2-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-209ENST00000497871 ALS2Q96Q42 1657 aa26.43■■□□□ 1.82
ATPAF2-209ENST00000497871 SF3B2Q13435 895 aaKnown RBP26.42■■□□□ 1.82
ATPAF2-209ENST00000497871 NBPF1Q3BBV0 1214 aa26.42■■□□□ 1.82
ATPAF2-209ENST00000497871 FAM98CQ17RN3 349 aaKnown RBP26.41■■□□□ 1.82
ATPAF2-209ENST00000497871 ARHGEF28Q8N1W1 1705 aaKnown RBP26.41■■□□□ 1.82
ATPAF2-209ENST00000497871 SRCAPQ6ZRS2 3230 aa26.41■■□□□ 1.82
ATPAF2-209ENST00000497871 A0A0G2JS52 829 aa26.4■■□□□ 1.82
ATPAF2-209ENST00000497871 PLEKHG3A1L390 1219 aa26.4■■□□□ 1.82
ATPAF2-209ENST00000497871 MYT1Q01538 1121 aa26.4■■□□□ 1.82
ATPAF2-209ENST00000497871 NBPF8Q3BBV2 869 aa26.4■■□□□ 1.82
ATPAF2-209ENST00000497871 PRDM11Q9NQV5 511 aa26.4■■□□□ 1.82
ATPAF2-209ENST00000497871 DEFB132Q7Z7B7 95 aa26.39■■□□□ 1.82
ATPAF2-209ENST00000497871 ACEP12821 1306 aa26.39■■□□□ 1.81
ATPAF2-209ENST00000497871 POLR3AO14802 1390 aaPredicted RBP26.38■■□□□ 1.81
ATPAF2-209ENST00000497871 SPATA31A5Q5VU36 1347 aa26.38■■□□□ 1.81
ATPAF2-209ENST00000497871 SPATA31A7Q8IWB4 1347 aa26.38■■□□□ 1.81
ATPAF2-209ENST00000497871 COL14A1Q05707 1796 aaKnown RBP26.37■■□□□ 1.81
ATPAF2-209ENST00000497871 BRWD3Q6RI45 1802 aa26.37■■□□□ 1.81
ATPAF2-209ENST00000497871 KIAA1210Q9ULL0 1709 aa26.35■■□□□ 1.81
ATPAF2-209ENST00000497871 KIAA0232Q92628 1395 aa26.33■■□□□ 1.81
ATPAF2-209ENST00000497871 NUTM2GQ5VZR2 741 aa26.33■■□□□ 1.81
ATPAF2-209ENST00000497871 ITSN1Q15811 1721 aa26.33■■□□□ 1.81
ATPAF2-209ENST00000497871 NRAPQ86VF7 1730 aa26.33■■□□□ 1.81
ATPAF2-209ENST00000497871 CENPJQ9HC77 1338 aaPredicted RBP26.32■■□□□ 1.8
ATPAF2-209ENST00000497871 ZC3H6P61129 1189 aaKnown RBP26.31■■□□□ 1.8
ATPAF2-209ENST00000497871 SRPK2P78362 688 aaKnown RBP26.31■■□□□ 1.8
ATPAF2-209ENST00000497871 CHRNA2Q15822 529 aa26.31■■□□□ 1.8
ATPAF2-209ENST00000497871 ABTB2Q8N961 1025 aa26.31■■□□□ 1.8
ATPAF2-209ENST00000497871 L3MBTL2Q969R5 705 aa26.29■■□□□ 1.8
ATPAF2-209ENST00000497871 SPATA31A1Q5TZJ5 1347 aa26.29■■□□□ 1.8
ATPAF2-209ENST00000497871 CRYBG1Q9Y4K1 1723 aa26.28■■□□□ 1.8
ATPAF2-209ENST00000497871 BAG6P46379 1132 aa26.28■■□□□ 1.8
ATPAF2-209ENST00000497871 CABP2Q9NPB3 220 aa26.27■■□□□ 1.8
ATPAF2-209ENST00000497871 STRN4Q9NRL3 753 aa26.27■■□□□ 1.8
ATPAF2-209ENST00000497871 EVA1CP58658 441 aa26.25■■□□□ 1.79
ATPAF2-209ENST00000497871 NLRP13Q86W25 1043 aa26.25■■□□□ 1.79
ATPAF2-209ENST00000497871 PPIP5K1Q6PFW1 1433 aa26.24■■□□□ 1.79
ATPAF2-209ENST00000497871 FAM182BQ5T319 152 aa26.24■■□□□ 1.79
ATPAF2-209ENST00000497871 TOPAZ1Q8N9V7 1692 aa26.24■■□□□ 1.79
ATPAF2-209ENST00000497871 BRD4O60885 1362 aaPredicted RBP26.22■■□□□ 1.79
ATPAF2-209ENST00000497871 CABP1Q9NZU7 370 aa26.22■■□□□ 1.79
ATPAF2-209ENST00000497871 CPDO75976 1380 aa26.21■■□□□ 1.79
ATPAF2-209ENST00000497871 USP19O94966 1318 aa26.21■■□□□ 1.79
ATPAF2-209ENST00000497871 GCP02774 474 aa26.21■■□□□ 1.79
ATPAF2-209ENST00000497871 SIN3AQ96ST3 1273 aa26.21■■□□□ 1.79
ATPAF2-209ENST00000497871 PHRF1Q9P1Y6 1649 aaKnown RBP26.19■■□□□ 1.78
ATPAF2-209ENST00000497871 EN1Q05925 392 aaPredicted RBP26.19■■□□□ 1.78
ATPAF2-209ENST00000497871 BARGINQ6ZT62 677 aa26.19■■□□□ 1.78
ATPAF2-209ENST00000497871 USP35Q9P2H5 1018 aa26.19■■□□□ 1.78
ATPAF2-209ENST00000497871 FAM196AQ6ZSG2 479 aa26.18■■□□□ 1.78
ATPAF2-209ENST00000497871 THSD7AQ9UPZ6 1657 aa26.18■■□□□ 1.78
ATPAF2-209ENST00000497871 SSH2Q76I76 1423 aa26.17■■□□□ 1.78
ATPAF2-209ENST00000497871 EVC2Q86UK5 1308 aa26.16■■□□□ 1.78
ATPAF2-209ENST00000497871 NEUROD1Q13562 356 aa26.16■■□□□ 1.78
ATPAF2-209ENST00000497871 LARP1Q6PKG0 1096 aaKnown RBP26.16■■□□□ 1.78
ATPAF2-209ENST00000497871 NLRP6P59044 892 aa26.14■■□□□ 1.78
ATPAF2-209ENST00000497871 TCP11L2Q8N4U5 519 aa26.14■■□□□ 1.78
ATPAF2-209ENST00000497871 CAMTA1Q9Y6Y1 1673 aa26.14■■□□□ 1.78
ATPAF2-209ENST00000497871 PDE3BQ13370 1112 aa26.13■■□□□ 1.77
ATPAF2-209ENST00000497871 THRAP3Q9Y2W1 955 aaKnown RBP26.13■■□□□ 1.77
ATPAF2-209ENST00000497871 USP6P35125 1406 aa26.13■■□□□ 1.77
ATPAF2-209ENST00000497871 NRKQ7Z2Y5 1582 aa26.12■■□□□ 1.77
ATPAF2-209ENST00000497871 DISP2A7MBM2 1401 aa26.12■■□□□ 1.77
ATPAF2-209ENST00000497871 PSDA5PKW4 1024 aaPredicted RBP26.11■■□□□ 1.77
ATPAF2-209ENST00000497871 TRIM37O94972 964 aa26.11■■□□□ 1.77
ATPAF2-209ENST00000497871 ROCK2O75116 1388 aaKnown RBP26.1■■□□□ 1.77
ATPAF2-209ENST00000497871 ZNF692Q9BU19 519 aaPredicted RBP26.1■■□□□ 1.77
ATPAF2-209ENST00000497871 QRICH2Q9H0J4 1663 aa26.09■■□□□ 1.77
ATPAF2-209ENST00000497871 RGPD1P0DJD0 1748 aa26.08■■□□□ 1.76
ATPAF2-209ENST00000497871 EZH2Q15910 746 aaKnown RBP26.07■■□□□ 1.76
ATPAF2-209ENST00000497871 CAMKK2Q96RR4 588 aa26.07■■□□□ 1.76
ATPAF2-209ENST00000497871 AATKQ6ZMQ8 1374 aa26.07■■□□□ 1.76
ATPAF2-209ENST00000497871 LMO7Q8WWI1 1683 aa26.06■■□□□ 1.76
ATPAF2-209ENST00000497871 APBA3O96018 575 aa26.06■■□□□ 1.76
ATPAF2-209ENST00000497871 COL5A2P05997 1499 aaPredicted RBP26.04■■□□□ 1.76
ATPAF2-209ENST00000497871 TRPM1Q7Z4N2 1603 aa26.04■■□□□ 1.76
ATPAF2-209ENST00000497871 ZBTB7CA1YPR0 619 aa26.04■■□□□ 1.76
ATPAF2-209ENST00000497871 TTC21BQ7Z4L5 1316 aa26.03■■□□□ 1.76
ATPAF2-209ENST00000497871 R3HDM1Q15032 1099 aaKnown RBP26.02■■□□□ 1.76
ATPAF2-209ENST00000497871 CRB1P82279 1406 aa26.02■■□□□ 1.76
ATPAF2-209ENST00000497871 C11orf95C9JLR9 678 aaPredicted RBP26.01■■□□□ 1.75
ATPAF2-209ENST00000497871 SLIT3O75094 1523 aa26.01■■□□□ 1.75
ATPAF2-209ENST00000497871 KCNH5Q8NCM2 988 aa26.01■■□□□ 1.75
ATPAF2-209ENST00000497871 PARD3Q8TEW0 1356 aa26.01■■□□□ 1.75
ATPAF2-209ENST00000497871 TTC21AQ8NDW8 1320 aa25.99■■□□□ 1.75
ATPAF2-209ENST00000497871 TOM1L2Q6ZVM7 507 aa25.99■■□□□ 1.75
ATPAF2-209ENST00000497871 TNS1Q9HBL0 1735 aaKnown RBP25.98■■□□□ 1.75
ATPAF2-209ENST00000497871 ARHGEF25Q86VW2 580 aa25.98■■□□□ 1.75
ATPAF2-209ENST00000497871 AXIN2Q9Y2T1 843 aa25.98■■□□□ 1.75
ATPAF2-209ENST00000497871 LRP5O75197 1615 aa25.96■■□□□ 1.75
ATPAF2-209ENST00000497871 CPSF1Q10570 1443 aaKnown RBP25.96■■□□□ 1.75
ATPAF2-209ENST00000497871 CARD11Q9BXL7 1154 aa25.95■■□□□ 1.74
ATPAF2-209ENST00000497871 WDR17Q8IZU2 1322 aa25.94■■□□□ 1.74
ATPAF2-209ENST00000497871 DDB1Q16531 1140 aa25.94■■□□□ 1.74
ATPAF2-209ENST00000497871 KTN1Q86UP2 1357 aaKnown RBP25.94■■□□□ 1.74
ATPAF2-209ENST00000497871 SBNO2Q9Y2G9 1366 aa25.94■■□□□ 1.74
ATPAF2-209ENST00000497871 PIK3C2AO00443 1686 aa25.93■■□□□ 1.74
ATPAF2-209ENST00000497871 NBPF14Q5TI25 921 aa25.92■■□□□ 1.74
ATPAF2-209ENST00000497871 CDCA7Q9BWT1 371 aaPredicted RBP25.92■■□□□ 1.74
ATPAF2-209ENST00000497871 SOX12O15370 315 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms