RNA–Protein interactions for RNA: ENST00000497822.5

C1orf61-223, Transcript of chromosome 1 open reading frame 61, human

TSL 2

Gene C1orf61, Length 542 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1orf61-223	ENST00000497822	SIN3A	Q96ST3	1273 aa		27.92	■■■□□ 2.06
C1orf61-223	ENST00000497822	KIAA1210	Q9ULL0	1709 aa		27.92	■■■□□ 2.06
C1orf61-223	ENST00000497822	L3MBTL2	Q969R5	705 aa		27.91	■■■□□ 2.06
C1orf61-223	ENST00000497822	ACE	P12821	1306 aa		27.91	■■■□□ 2.06
C1orf61-223	ENST00000497822	SRCAP	Q6ZRS2	3230 aa		27.9	■■■□□ 2.06
C1orf61-223	ENST00000497822	CCDC125	Q86Z20	511 aa		27.9	■■■□□ 2.06
C1orf61-223	ENST00000497822	FAM98C	Q17RN3	349 aa	Known RBP	27.89	■■■□□ 2.06
C1orf61-223	ENST00000497822	NBPF8	Q3BBV2	869 aa		27.89	■■■□□ 2.06
C1orf61-223	ENST00000497822	NRAP	Q86VF7	1730 aa		27.89	■■■□□ 2.05
C1orf61-223	ENST00000497822	ITSN1	Q15811	1721 aa		27.88	■■■□□ 2.05
C1orf61-223	ENST00000497822	CRYBG1	Q9Y4K1	1723 aa		27.88	■■■□□ 2.05
C1orf61-223	ENST00000497822	CCDC61	Q9Y6R9	512 aa		27.88	■■■□□ 2.05
C1orf61-223	ENST00000497822	COL14A1	Q05707	1796 aa	Known RBP	27.86	■■■□□ 2.05
C1orf61-223	ENST00000497822		A0A0G2JS52	829 aa		27.86	■■■□□ 2.05
C1orf61-223	ENST00000497822	PLEKHG3	A1L390	1219 aa		27.86	■■■□□ 2.05
C1orf61-223	ENST00000497822	MYT1	Q01538	1121 aa		27.86	■■■□□ 2.05
C1orf61-223	ENST00000497822	CHRNA2	Q15822	529 aa		27.86	■■■□□ 2.05
C1orf61-223	ENST00000497822	KRT27	Q7Z3Y8	459 aa		27.86	■■■□□ 2.05
C1orf61-223	ENST00000497822	DEFB132	Q7Z7B7	95 aa		27.86	■■■□□ 2.05
C1orf61-223	ENST00000497822	PRDM11	Q9NQV5	511 aa		27.86	■■■□□ 2.05
C1orf61-223	ENST00000497822	POLR3A	O14802	1390 aa	Predicted RBP	27.86	■■■□□ 2.05
C1orf61-223	ENST00000497822	CABP2	Q9NPB3	220 aa		27.85	■■■□□ 2.05
C1orf61-223	ENST00000497822	CENPJ	Q9HC77	1338 aa	Predicted RBP	27.84	■■■□□ 2.05
C1orf61-223	ENST00000497822	TOPAZ1	Q8N9V7	1692 aa		27.84	■■■□□ 2.05
C1orf61-223	ENST00000497822	KIAA0232	Q92628	1395 aa		27.84	■■■□□ 2.05
C1orf61-223	ENST00000497822	BLM	P54132	1417 aa	Predicted RBP	27.84	■■■□□ 2.05
C1orf61-223	ENST00000497822	ZC3H6	P61129	1189 aa	Known RBP	27.83	■■■□□ 2.05
C1orf61-223	ENST00000497822	SRPK2	P78362	688 aa	Known RBP	27.83	■■■□□ 2.05
C1orf61-223	ENST00000497822	NEUROD1	Q13562	356 aa		27.83	■■■□□ 2.05
C1orf61-223	ENST00000497822	ZRANB1	Q9UGI0	708 aa		27.82	■■■□□ 2.04
C1orf61-223	ENST00000497822	SPATA31A5	Q5VU36	1347 aa		27.81	■■■□□ 2.04
C1orf61-223	ENST00000497822	SPATA31A7	Q8IWB4	1347 aa		27.81	■■■□□ 2.04
C1orf61-223	ENST00000497822	FAM182B	Q5T319	152 aa		27.8	■■■□□ 2.04
C1orf61-223	ENST00000497822	ABTB2	Q8N961	1025 aa		27.78	■■■□□ 2.04
C1orf61-223	ENST00000497822	PPIP5K1	Q6PFW1	1433 aa		27.77	■■■□□ 2.04
C1orf61-223	ENST00000497822	STRN4	Q9NRL3	753 aa		27.77	■■■□□ 2.04
C1orf61-223	ENST00000497822	PHRF1	Q9P1Y6	1649 aa	Known RBP	27.77	■■■□□ 2.04
C1orf61-223	ENST00000497822	CABP1	Q9NZU7	370 aa		27.74	■■■□□ 2.03
C1orf61-223	ENST00000497822	QRICH2	Q9H0J4	1663 aa		27.74	■■■□□ 2.03
C1orf61-223	ENST00000497822	SF3B2	Q13435	895 aa	Known RBP	27.73	■■■□□ 2.03
C1orf61-223	ENST00000497822	SPATA31A1	Q5TZJ5	1347 aa		27.72	■■■□□ 2.03
C1orf61-223	ENST00000497822	USP35	Q9P2H5	1018 aa		27.7	■■■□□ 2.02
C1orf61-223	ENST00000497822	USP19	O94966	1318 aa		27.69	■■■□□ 2.02
C1orf61-223	ENST00000497822	TRPM1	Q7Z4N2	1603 aa		27.69	■■■□□ 2.02
C1orf61-223	ENST00000497822	NRK	Q7Z2Y5	1582 aa		27.68	■■■□□ 2.02
C1orf61-223	ENST00000497822	THSD7A	Q9UPZ6	1657 aa		27.68	■■■□□ 2.02
C1orf61-223	ENST00000497822	EVA1C	P58658	441 aa		27.67	■■■□□ 2.02
C1orf61-223	ENST00000497822	CAMTA1	Q9Y6Y1	1673 aa		27.67	■■■□□ 2.02
C1orf61-223	ENST00000497822	ROCK2	O75116	1388 aa	Known RBP	27.66	■■■□□ 2.02
C1orf61-223	ENST00000497822	GC	P02774	474 aa		27.66	■■■□□ 2.02
C1orf61-223	ENST00000497822	LARP1	Q6PKG0	1096 aa	Known RBP	27.66	■■■□□ 2.02
C1orf61-223	ENST00000497822	NLRP13	Q86W25	1043 aa		27.66	■■■□□ 2.02
C1orf61-223	ENST00000497822	SSH2	Q76I76	1423 aa		27.64	■■■□□ 2.02
C1orf61-223	ENST00000497822	EVC2	Q86UK5	1308 aa		27.64	■■■□□ 2.01
C1orf61-223	ENST00000497822	CPD	O75976	1380 aa		27.63	■■■□□ 2.01
C1orf61-223	ENST00000497822	USP6	P35125	1406 aa		27.63	■■■□□ 2.01
C1orf61-223	ENST00000497822	ZBTB7C	A1YPR0	619 aa		27.62	■■■□□ 2.01
C1orf61-223	ENST00000497822	NLRP6	P59044	892 aa		27.62	■■■□□ 2.01
C1orf61-223	ENST00000497822	EN1	Q05925	392 aa	Predicted RBP	27.62	■■■□□ 2.01
C1orf61-223	ENST00000497822	BAG6	P46379	1132 aa		27.61	■■■□□ 2.01
C1orf61-223	ENST00000497822	LMO7	Q8WWI1	1683 aa		27.59	■■■□□ 2.01
C1orf61-223	ENST00000497822	PSD	A5PKW4	1024 aa	Predicted RBP	27.57	■■■□□ 2
C1orf61-223	ENST00000497822	TRIM37	O94972	964 aa		27.56	■■■□□ 2
C1orf61-223	ENST00000497822	BARGIN	Q6ZT62	677 aa		27.56	■■■□□ 2
C1orf61-223	ENST00000497822	BRD4	O60885	1362 aa	Predicted RBP	27.56	■■■□□ 2
C1orf61-223	ENST00000497822	TCP11L2	Q8N4U5	519 aa		27.55	■■■□□ 2
C1orf61-223	ENST00000497822	COL5A2	P05997	1499 aa	Predicted RBP	27.53	■■■□□ 2
C1orf61-223	ENST00000497822	TTC21B	Q7Z4L5	1316 aa		27.53	■■■□□ 2
C1orf61-223	ENST00000497822	FAM196A	Q6ZSG2	479 aa		27.53	■■■□□ 2
C1orf61-223	ENST00000497822	RGPD1	P0DJD0	1748 aa		27.53	■■■□□ 2
C1orf61-223	ENST00000497822	PIK3C2A	O00443	1686 aa		27.52	■■■□□ 2
C1orf61-223	ENST00000497822	SLIT3	O75094	1523 aa		27.51	■■■□□ 2
C1orf61-223	ENST00000497822	PDE3B	Q13370	1112 aa		27.51	■■□□□ 1.99
C1orf61-223	ENST00000497822	EZH2	Q15910	746 aa	Known RBP	27.51	■■□□□ 1.99
C1orf61-223	ENST00000497822	AXIN2	Q9Y2T1	843 aa		27.51	■■□□□ 1.99
C1orf61-223	ENST00000497822	TNS1	Q9HBL0	1735 aa	Known RBP	27.5	■■□□□ 1.99
C1orf61-223	ENST00000497822	SOX12	O15370	315 aa		27.5	■■□□□ 1.99
C1orf61-223	ENST00000497822	CARD11	Q9BXL7	1154 aa		27.49	■■□□□ 1.99
C1orf61-223	ENST00000497822	AATK	Q6ZMQ8	1374 aa		27.48	■■□□□ 1.99
C1orf61-223	ENST00000497822	ZNF692	Q9BU19	519 aa	Predicted RBP	27.48	■■□□□ 1.99
C1orf61-223	ENST00000497822	CAMKK2	Q96RR4	588 aa		27.47	■■□□□ 1.99
C1orf61-223	ENST00000497822	APBA3	O96018	575 aa		27.46	■■□□□ 1.99
C1orf61-223	ENST00000497822	THRAP3	Q9Y2W1	955 aa	Known RBP	27.46	■■□□□ 1.99
C1orf61-223	ENST00000497822	DISP2	A7MBM2	1401 aa		27.46	■■□□□ 1.99
C1orf61-223	ENST00000497822	CPSF1	Q10570	1443 aa	Known RBP	27.46	■■□□□ 1.99
C1orf61-223	ENST00000497822	AKAP12	Q02952	1782 aa		27.45	■■□□□ 1.99
C1orf61-223	ENST00000497822	CRB1	P82279	1406 aa		27.45	■■□□□ 1.98
C1orf61-223	ENST00000497822	KTN1	Q86UP2	1357 aa	Known RBP	27.45	■■□□□ 1.98
C1orf61-223	ENST00000497822	COL18A1	P39060	1754 aa		27.45	■■□□□ 1.98
C1orf61-223	ENST00000497822	R3HDM1	Q15032	1099 aa	Known RBP	27.44	■■□□□ 1.98
C1orf61-223	ENST00000497822	ARHGEF25	Q86VW2	580 aa		27.44	■■□□□ 1.98
C1orf61-223	ENST00000497822	TOM1L2	Q6ZVM7	507 aa		27.43	■■□□□ 1.98
C1orf61-223	ENST00000497822	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	27.42	■■□□□ 1.98
C1orf61-223	ENST00000497822	TONSL	Q96HA7	1378 aa		27.42	■■□□□ 1.98
C1orf61-223	ENST00000497822	TTC21A	Q8NDW8	1320 aa		27.41	■■□□□ 1.98
C1orf61-223	ENST00000497822	SBNO2	Q9Y2G9	1366 aa		27.39	■■□□□ 1.98
C1orf61-223	ENST00000497822	TMC1	Q8TDI8	760 aa		27.39	■■□□□ 1.98
C1orf61-223	ENST00000497822	SLC12A5	Q9H2X9	1139 aa		27.39	■■□□□ 1.98
C1orf61-223	ENST00000497822	NME9	Q86XW9	330 aa		27.38	■■□□□ 1.97
C1orf61-223	ENST00000497822	KCNH5	Q8NCM2	988 aa		27.38	■■□□□ 1.97

Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms