RNA–Protein interactions for RNA: ENST00000497739.1

PTPN3-206, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 3

Gene PTPN3, Length 781 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-206ENST00000497739 VGFO15240 615 aaPredicted RBP13.94□□□□□ -0.18
PTPN3-206ENST00000497739 BLMP54132 1417 aaPredicted RBP13.94□□□□□ -0.18
PTPN3-206ENST00000497739 GJD4Q96KN9 370 aaPredicted RBP13.94□□□□□ -0.18
PTPN3-206ENST00000497739 PPLO60437 1756 aa13.94□□□□□ -0.18
PTPN3-206ENST00000497739 XPCQ01831 940 aaPredicted RBP13.93□□□□□ -0.18
PTPN3-206ENST00000497739 RPGRIP1LQ68CZ1 1315 aa13.92□□□□□ -0.18
PTPN3-206ENST00000497739 CHRM1P11229 460 aaPredicted RBP13.92□□□□□ -0.18
PTPN3-206ENST00000497739 LRP5O75197 1615 aa13.91□□□□□ -0.18
PTPN3-206ENST00000497739 USP32Q8NFA0 1604 aa13.91□□□□□ -0.18
PTPN3-206ENST00000497739 FOXO3O43524 673 aa13.91□□□□□ -0.18
PTPN3-206ENST00000497739 PAK3O75914 559 aaPredicted RBP13.91□□□□□ -0.18
PTPN3-206ENST00000497739 ESCO1Q5FWF5 840 aa13.91□□□□□ -0.18
PTPN3-206ENST00000497739 PLEKHH1Q9ULM0 1364 aa13.9□□□□□ -0.18
PTPN3-206ENST00000497739 SPATA31A3Q5VYP0 1347 aa13.9□□□□□ -0.19
PTPN3-206ENST00000497739 UNC5CLQ8IV45 518 aa13.89□□□□□ -0.19
PTPN3-206ENST00000497739 ZNF579Q8NAF0 562 aaKnown RBP13.89□□□□□ -0.19
PTPN3-206ENST00000497739 LRPPRCP42704 1394 aaKnown RBP13.88□□□□□ -0.19
PTPN3-206ENST00000497739 HRCP23327 699 aa13.88□□□□□ -0.19
PTPN3-206ENST00000497739 DEFB132Q7Z7B7 95 aa13.88□□□□□ -0.19
PTPN3-206ENST00000497739 SPATA31E1Q6ZUB1 1445 aa13.88□□□□□ -0.19
PTPN3-206ENST00000497739 ADGRF5Q8IZF2 1346 aa13.88□□□□□ -0.19
PTPN3-206ENST00000497739 FMN2Q9NZ56 1722 aa13.87□□□□□ -0.19
PTPN3-206ENST00000497739 KNDC1Q76NI1 1749 aa13.87□□□□□ -0.19
PTPN3-206ENST00000497739 ABCC11Q96J66 1382 aa13.86□□□□□ -0.19
PTPN3-206ENST00000497739 KIF1AQ12756 1690 aa13.86□□□□□ -0.19
PTPN3-206ENST00000497739 BRWD3Q6RI45 1802 aa13.86□□□□□ -0.19
PTPN3-206ENST00000497739 ECM2O94769 699 aaPredicted RBP13.86□□□□□ -0.19
PTPN3-206ENST00000497739 PYGBP11216 843 aa13.86□□□□□ -0.19
PTPN3-206ENST00000497739 RGL3Q3MIN7 710 aa13.86□□□□□ -0.19
PTPN3-206ENST00000497739 WAPLQ7Z5K2 1190 aa13.86□□□□□ -0.19
PTPN3-206ENST00000497739 PIK3C2GO75747 1445 aa13.86□□□□□ -0.19
PTPN3-206ENST00000497739 ONECUT3O60422 494 aaPredicted RBP13.85□□□□□ -0.19
PTPN3-206ENST00000497739 KIF12Q96FN5 646 aa13.85□□□□□ -0.19
PTPN3-206ENST00000497739 PHF12Q96QT6 1004 aa13.85□□□□□ -0.19
PTPN3-206ENST00000497739 ABCA3Q99758 1704 aa13.84□□□□□ -0.19
PTPN3-206ENST00000497739 TNS3Q68CZ2 1445 aa13.84□□□□□ -0.19
PTPN3-206ENST00000497739 NUTM2FA1L443 756 aa13.84□□□□□ -0.19
PTPN3-206ENST00000497739 VPS72Q15906 364 aa13.84□□□□□ -0.19
PTPN3-206ENST00000497739 SEPT12Q8IYM1 358 aa13.84□□□□□ -0.19
PTPN3-206ENST00000497739 PLCH1Q4KWH8 1693 aa13.84□□□□□ -0.19
PTPN3-206ENST00000497739 IFT172Q9UG01 1749 aa13.84□□□□□ -0.19
PTPN3-206ENST00000497739 TRIM26Q12899 539 aaPredicted RBP13.83□□□□□ -0.2
PTPN3-206ENST00000497739 ANKRD30BQ9BXX2 1392 aa13.83□□□□□ -0.2
PTPN3-206ENST00000497739 NWD2Q9ULI1 1742 aa13.82□□□□□ -0.2
PTPN3-206ENST00000497739 YTHDC2Q9H6S0 1430 aaKnown RBP13.81□□□□□ -0.2
PTPN3-206ENST00000497739 RNF25Q96BH1 459 aaPredicted RBP13.81□□□□□ -0.2
PTPN3-206ENST00000497739 STK26Q9P289 416 aa13.81□□□□□ -0.2
PTPN3-206ENST00000497739 NRXN1Q9ULB1 1477 aa13.8□□□□□ -0.2
PTPN3-206ENST00000497739 RGL2O15211 777 aa13.8□□□□□ -0.2
PTPN3-206ENST00000497739 TMEM132EQ6IEE7 984 aa13.8□□□□□ -0.2
PTPN3-206ENST00000497739 CABLES1Q8TDN4 633 aa13.8□□□□□ -0.2
PTPN3-206ENST00000497739 SBNO1A3KN83 1393 aa13.8□□□□□ -0.2
PTPN3-206ENST00000497739 NRAPQ86VF7 1730 aa13.79□□□□□ -0.2
PTPN3-206ENST00000497739 MAP3K13O43283 966 aa13.79□□□□□ -0.2
PTPN3-206ENST00000497739 KRT28Q7Z3Y7 464 aa13.79□□□□□ -0.2
PTPN3-206ENST00000497739 KRT27Q7Z3Y8 459 aa13.79□□□□□ -0.2
PTPN3-206ENST00000497739 DISP2A7MBM2 1401 aa13.76□□□□□ -0.21
PTPN3-206ENST00000497739 ARHGEF10O15013 1369 aa13.76□□□□□ -0.21
PTPN3-206ENST00000497739 FAM83GA6ND36 823 aa13.76□□□□□ -0.21
PTPN3-206ENST00000497739 SIRT1Q96EB6 747 aa13.76□□□□□ -0.21
PTPN3-206ENST00000497739 SGIP1Q9BQI5 828 aa13.76□□□□□ -0.21
PTPN3-206ENST00000497739 PHF8Q9UPP1 1060 aa13.76□□□□□ -0.21
PTPN3-206ENST00000497739 TRPM3Q9HCF6 1732 aaPredicted RBP13.76□□□□□ -0.21
PTPN3-206ENST00000497739 PSDA5PKW4 1024 aaPredicted RBP13.75□□□□□ -0.21
PTPN3-206ENST00000497739 THSD7AQ9UPZ6 1657 aa13.75□□□□□ -0.21
PTPN3-206ENST00000497739 ADGRB2O60241 1585 aa13.75□□□□□ -0.21
PTPN3-206ENST00000497739 SF3B2Q13435 895 aaKnown RBP13.74□□□□□ -0.21
PTPN3-206ENST00000497739 ANKARQ7Z5J8 1434 aa13.73□□□□□ -0.21
PTPN3-206ENST00000497739 RGPD8O14715 1765 aaPredicted RBP13.73□□□□□ -0.21
PTPN3-206ENST00000497739 TNS1Q9HBL0 1735 aaKnown RBP13.73□□□□□ -0.21
PTPN3-206ENST00000497739 ALS2Q96Q42 1657 aa13.72□□□□□ -0.21
PTPN3-206ENST00000497739 PSME1Q06323 249 aa13.72□□□□□ -0.21
PTPN3-206ENST00000497739 FAM98CQ17RN3 349 aaKnown RBP13.72□□□□□ -0.21
PTPN3-206ENST00000497739 DCAF11Q8TEB1 546 aa13.72□□□□□ -0.21
PTPN3-206ENST00000497739 C14orf93Q9H972 538 aaKnown RBP13.72□□□□□ -0.21
PTPN3-206ENST00000497739 KDM2AQ9Y2K7 1162 aa13.72□□□□□ -0.21
PTPN3-206ENST00000497739 DLC1Q96QB1 1528 aa13.72□□□□□ -0.21
PTPN3-206ENST00000497739 CRYBG1Q9Y4K1 1723 aa13.72□□□□□ -0.21
PTPN3-206ENST00000497739 BAG6P46379 1132 aa13.71□□□□□ -0.21
PTPN3-206ENST00000497739 IFNL1Q8IU54 200 aa13.71□□□□□ -0.21
PTPN3-206ENST00000497739 STAC3Q96MF2 364 aa13.71□□□□□ -0.21
PTPN3-206ENST00000497739 PCDHB13Q9Y5F0 798 aa13.71□□□□□ -0.21
PTPN3-206ENST00000497739 COL14A1Q05707 1796 aaKnown RBP13.71□□□□□ -0.22
PTPN3-206ENST00000497739 ADGRB1O14514 1584 aa13.71□□□□□ -0.22
PTPN3-206ENST00000497739 RGPD1P0DJD0 1748 aa13.7□□□□□ -0.22
PTPN3-206ENST00000497739 HAP1P54257 671 aaPredicted RBP13.7□□□□□ -0.22
PTPN3-206ENST00000497739 MS4A3Q96HJ5 214 aa13.7□□□□□ -0.22
PTPN3-206ENST00000497739 PCDHB8Q9UN66 801 aa13.7□□□□□ -0.22
PTPN3-206ENST00000497739 CCDC9Q9Y3X0 531 aaKnown RBP13.7□□□□□ -0.22
PTPN3-206ENST00000497739 SPATA31A5Q5VU36 1347 aa13.69□□□□□ -0.22
PTPN3-206ENST00000497739 SPATA31A7Q8IWB4 1347 aa13.69□□□□□ -0.22
PTPN3-206ENST00000497739 GABBR2O75899 941 aa13.69□□□□□ -0.22
PTPN3-206ENST00000497739 CLCN6P51797 869 aa13.69□□□□□ -0.22
PTPN3-206ENST00000497739 EN1Q05925 392 aaPredicted RBP13.69□□□□□ -0.22
PTPN3-206ENST00000497739 PRAM1Q96QH2 718 aa13.69□□□□□ -0.22
PTPN3-206ENST00000497739 BTG4Q9NY30 223 aa13.69□□□□□ -0.22
PTPN3-206ENST00000497739 DHX57Q6P158 1386 aaKnown RBP13.69□□□□□ -0.22
PTPN3-206ENST00000497739 PRR36Q9H6K5 1346 aa13.68□□□□□ -0.22
PTPN3-206ENST00000497739 CFAP70Q5T0N1 1121 aa13.68□□□□□ -0.22
PTPN3-206ENST00000497739 FAM182BQ5T319 152 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms