RNA–Protein interactions for RNA: ENST00000497700.1

ELL3-208, Transcript of elongation factor for RNA polymerase II 3, humanhuman

TSL 3

Gene ELL3, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-208ENST00000497700 BTG4Q9NY30 223 aa26.19■■□□□ 1.78
ELL3-208ENST00000497700 KRT27Q7Z3Y8 459 aa26.18■■□□□ 1.78
ELL3-208ENST00000497700 ONECUT3O60422 494 aaPredicted RBP26.17■■□□□ 1.78
ELL3-208ENST00000497700 FAM98CQ17RN3 349 aaKnown RBP26.17■■□□□ 1.78
ELL3-208ENST00000497700 EIF3AQ14152 1382 aaKnown RBP26.17■■□□□ 1.78
ELL3-208ENST00000497700 ITSN1Q15811 1721 aa26.17■■□□□ 1.78
ELL3-208ENST00000497700 PAK3O75914 559 aaPredicted RBP26.16■■□□□ 1.78
ELL3-208ENST00000497700 NGDNQ8NEJ9 315 aaKnown RBP26.16■■□□□ 1.78
ELL3-208ENST00000497700 ATP7BP35670 1465 aa26.16■■□□□ 1.78
ELL3-208ENST00000497700 SF3B2Q13435 895 aaKnown RBP26.12■■□□□ 1.77
ELL3-208ENST00000497700 PHRF1Q9P1Y6 1649 aaKnown RBP26.11■■□□□ 1.77
ELL3-208ENST00000497700 FAM182BQ5T319 152 aa26.11■■□□□ 1.77
ELL3-208ENST00000497700 NUDT16Q96DE0 195 aaKnown RBP26.1■■□□□ 1.77
ELL3-208ENST00000497700 TOPAZ1Q8N9V7 1692 aa26.09■■□□□ 1.77
ELL3-208ENST00000497700 NUTM2GQ5VZR2 741 aa26.08■■□□□ 1.77
ELL3-208ENST00000497700 PRDM11Q9NQV5 511 aa26.08■■□□□ 1.77
ELL3-208ENST00000497700 THSD7AQ9UPZ6 1657 aa26.07■■□□□ 1.76
ELL3-208ENST00000497700 SPATA31A5Q5VU36 1347 aa26.07■■□□□ 1.76
ELL3-208ENST00000497700 SPATA31A7Q8IWB4 1347 aa26.07■■□□□ 1.76
ELL3-208ENST00000497700 CHRNA2Q15822 529 aa26.06■■□□□ 1.76
ELL3-208ENST00000497700 KIAA0232Q92628 1395 aa26.06■■□□□ 1.76
ELL3-208ENST00000497700 CDK19Q9BWU1 502 aa26.05■■□□□ 1.76
ELL3-208ENST00000497700 STAC3Q96MF2 364 aa26.04■■□□□ 1.76
ELL3-208ENST00000497700 RGPD1P0DJD0 1748 aa26.03■■□□□ 1.76
ELL3-208ENST00000497700 KIAA1210Q9ULL0 1709 aa26.02■■□□□ 1.76
ELL3-208ENST00000497700 PSDA5PKW4 1024 aaPredicted RBP26.02■■□□□ 1.76
ELL3-208ENST00000497700 HRCP23327 699 aa26.02■■□□□ 1.76
ELL3-208ENST00000497700 ZC3H6P61129 1189 aaKnown RBP26.01■■□□□ 1.75
ELL3-208ENST00000497700 NBPF1Q3BBV0 1214 aa26.01■■□□□ 1.75
ELL3-208ENST00000497700 TNS1Q9HBL0 1735 aaKnown RBP26.01■■□□□ 1.75
ELL3-208ENST00000497700 STRN4Q9NRL3 753 aa26.01■■□□□ 1.75
ELL3-208ENST00000497700 ACEP12821 1306 aa26■■□□□ 1.75
ELL3-208ENST00000497700 BAG6P46379 1132 aa26■■□□□ 1.75
ELL3-208ENST00000497700 EN1Q05925 392 aaPredicted RBP25.99■■□□□ 1.75
ELL3-208ENST00000497700 NRKQ7Z2Y5 1582 aa25.99■■□□□ 1.75
ELL3-208ENST00000497700 POLR3AO14802 1390 aaPredicted RBP25.98■■□□□ 1.75
ELL3-208ENST00000497700 SPATA31A1Q5TZJ5 1347 aa25.97■■□□□ 1.75
ELL3-208ENST00000497700 LRP5O75197 1615 aa25.97■■□□□ 1.75
ELL3-208ENST00000497700 NBPF8Q3BBV2 869 aa25.96■■□□□ 1.75
ELL3-208ENST00000497700 USP35Q9P2H5 1018 aa25.95■■□□□ 1.74
ELL3-208ENST00000497700 CCDC61Q9Y6R9 512 aa25.95■■□□□ 1.74
ELL3-208ENST00000497700 QRICH2Q9H0J4 1663 aa25.93■■□□□ 1.74
ELL3-208ENST00000497700 CAMTA1Q9Y6Y1 1673 aa25.93■■□□□ 1.74
ELL3-208ENST00000497700 LMO7Q8WWI1 1683 aa25.91■■□□□ 1.74
ELL3-208ENST00000497700 PLEKHG3A1L390 1219 aa25.91■■□□□ 1.74
ELL3-208ENST00000497700 ABTB2Q8N961 1025 aa25.91■■□□□ 1.74
ELL3-208ENST00000497700 SSH2Q76I76 1423 aa25.9■■□□□ 1.74
ELL3-208ENST00000497700 CABP2Q9NPB3 220 aa25.9■■□□□ 1.74
ELL3-208ENST00000497700 PPIP5K1Q6PFW1 1433 aa25.89■■□□□ 1.74
ELL3-208ENST00000497700 TRIM37O94972 964 aa25.89■■□□□ 1.74
ELL3-208ENST00000497700 SRPK2P78362 688 aaKnown RBP25.89■■□□□ 1.74
ELL3-208ENST00000497700 EZH2Q15910 746 aaKnown RBP25.88■■□□□ 1.73
ELL3-208ENST00000497700 EVA1CP58658 441 aa25.87■■□□□ 1.73
ELL3-208ENST00000497700 LARP1Q6PKG0 1096 aaKnown RBP25.87■■□□□ 1.73
ELL3-208ENST00000497700 USP19O94966 1318 aa25.87■■□□□ 1.73
ELL3-208ENST00000497700 CENPJQ9HC77 1338 aaPredicted RBP25.87■■□□□ 1.73
ELL3-208ENST00000497700 R3HDM1Q15032 1099 aaKnown RBP25.86■■□□□ 1.73
ELL3-208ENST00000497700 DISP2A7MBM2 1401 aa25.86■■□□□ 1.73
ELL3-208ENST00000497700 CPDO75976 1380 aa25.82■■□□□ 1.72
ELL3-208ENST00000497700 ZBTB7CA1YPR0 619 aa25.82■■□□□ 1.72
ELL3-208ENST00000497700 FAM196AQ6ZSG2 479 aa25.82■■□□□ 1.72
ELL3-208ENST00000497700 GCP02774 474 aa25.8■■□□□ 1.72
ELL3-208ENST00000497700 BARGINQ6ZT62 677 aa25.8■■□□□ 1.72
ELL3-208ENST00000497700 CAMKK2Q96RR4 588 aa25.8■■□□□ 1.72
ELL3-208ENST00000497700 COL5A2P05997 1499 aaPredicted RBP25.79■■□□□ 1.72
ELL3-208ENST00000497700 APBA3O96018 575 aa25.79■■□□□ 1.72
ELL3-208ENST00000497700 NLRP13Q86W25 1043 aa25.79■■□□□ 1.72
ELL3-208ENST00000497700 CABP1Q9NZU7 370 aa25.79■■□□□ 1.72
ELL3-208ENST00000497700 RREB1Q92766 1687 aa25.79■■□□□ 1.72
ELL3-208ENST00000497700 PDE3BQ13370 1112 aa25.78■■□□□ 1.72
ELL3-208ENST00000497700 TCP11L2Q8N4U5 519 aa25.78■■□□□ 1.72
ELL3-208ENST00000497700 L3MBTL2Q969R5 705 aa25.78■■□□□ 1.72
ELL3-208ENST00000497700 USP6P35125 1406 aa25.78■■□□□ 1.72
ELL3-208ENST00000497700 TRPM1Q7Z4N2 1603 aa25.77■■□□□ 1.72
ELL3-208ENST00000497700 PIK3C2AO00443 1686 aa25.77■■□□□ 1.72
ELL3-208ENST00000497700 NUP188Q5SRE5 1749 aa25.77■■□□□ 1.72
ELL3-208ENST00000497700 PARP4Q9UKK3 1724 aaKnown RBP25.77■■□□□ 1.72
ELL3-208ENST00000497700 SIN3AQ96ST3 1273 aa25.75■■□□□ 1.71
ELL3-208ENST00000497700 SLIT3O75094 1523 aa25.74■■□□□ 1.71
ELL3-208ENST00000497700 NLRP6P59044 892 aa25.73■■□□□ 1.71
ELL3-208ENST00000497700 COL18A1P39060 1754 aa25.72■■□□□ 1.71
ELL3-208ENST00000497700 LRRC37A3O60309 1634 aa25.72■■□□□ 1.71
ELL3-208ENST00000497700 RGPD5Q99666 1765 aa25.72■■□□□ 1.71
ELL3-208ENST00000497700 CRB1P82279 1406 aa25.71■■□□□ 1.71
ELL3-208ENST00000497700 CCER1Q8TC90 406 aaPredicted RBP25.7■■□□□ 1.7
ELL3-208ENST00000497700 PEAK1Q9H792 1746 aa25.7■■□□□ 1.7
ELL3-208ENST00000497700 WNK3Q9BYP7 1800 aa25.7■■□□□ 1.7
ELL3-208ENST00000497700 AKAP12Q02952 1782 aa25.69■■□□□ 1.7
ELL3-208ENST00000497700 BRD4O60885 1362 aaPredicted RBP25.69■■□□□ 1.7
ELL3-208ENST00000497700 SBF2Q86WG5 1849 aa25.68■■□□□ 1.7
ELL3-208ENST00000497700 THRAP3Q9Y2W1 955 aaKnown RBP25.68■■□□□ 1.7
ELL3-208ENST00000497700 PARD3Q8TEW0 1356 aa25.68■■□□□ 1.7
ELL3-208ENST00000497700 NEUROD1Q13562 356 aa25.67■■□□□ 1.7
ELL3-208ENST00000497700 AATKQ6ZMQ8 1374 aa25.67■■□□□ 1.7
ELL3-208ENST00000497700 EVC2Q86UK5 1308 aa25.66■■□□□ 1.7
ELL3-208ENST00000497700 SOX12O15370 315 aa25.66■■□□□ 1.7
ELL3-208ENST00000497700 AXIN2Q9Y2T1 843 aa25.65■■□□□ 1.7
ELL3-208ENST00000497700 ROCK2O75116 1388 aaKnown RBP25.65■■□□□ 1.7
ELL3-208ENST00000497700 TOM1L2Q6ZVM7 507 aa25.63■■□□□ 1.69
ELL3-208ENST00000497700 CPSF1Q10570 1443 aaKnown RBP25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms