RNA–Protein interactions for RNA: ENST00000497527.1

HPS1-213, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-213ENST00000497527 WDR43Q15061 677 aaKnown RBP eCLIP16.31■□□□□ 0.2
HPS1-213ENST00000497527 GGNBP2Q9H3C7 697 aa16.31■□□□□ 0.2
HPS1-213ENST00000497527 TTC21BQ7Z4L5 1316 aa16.3■□□□□ 0.2
HPS1-213ENST00000497527 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.3■□□□□ 0.2
HPS1-213ENST00000497527 COG3Q96JB2 828 aa16.3■□□□□ 0.2
HPS1-213ENST00000497527 PHF8Q9UPP1 1060 aa16.3■□□□□ 0.2
HPS1-213ENST00000497527 XIRP1Q702N8 1843 aaKnown RBP16.3■□□□□ 0.2
HPS1-213ENST00000497527 USP54Q70EL1 1684 aa16.3■□□□□ 0.2
HPS1-213ENST00000497527 SSH2Q76I76 1423 aa16.28■□□□□ 0.2
HPS1-213ENST00000497527 MSH6P52701 1360 aa16.28■□□□□ 0.2
HPS1-213ENST00000497527 ATF3P18847 181 aa16.28■□□□□ 0.2
HPS1-213ENST00000497527 LRRC7Q96NW7 1537 aa16.28■□□□□ 0.2
HPS1-213ENST00000497527 AATKQ6ZMQ8 1374 aa16.27■□□□□ 0.2
HPS1-213ENST00000497527 PMFBP1Q8TBY8 1022 aa16.27■□□□□ 0.2
HPS1-213ENST00000497527 SHPRHQ149N8 1683 aa16.27■□□□□ 0.19
HPS1-213ENST00000497527 ZBED9Q6R2W3 1325 aa16.26■□□□□ 0.19
HPS1-213ENST00000497527 TNNT2P45379 298 aaPredicted RBP16.26■□□□□ 0.19
HPS1-213ENST00000497527 CADPS2Q86UW7 1296 aa16.26■□□□□ 0.19
HPS1-213ENST00000497527 BLMP54132 1417 aaPredicted RBP16.26■□□□□ 0.19
HPS1-213ENST00000497527 MTHFSP49914 203 aa16.25■□□□□ 0.19
HPS1-213ENST00000497527 NME9Q86XW9 330 aa16.25■□□□□ 0.19
HPS1-213ENST00000497527 RBM33Q96EV2 1170 aaKnown RBP16.25■□□□□ 0.19
HPS1-213ENST00000497527 OVOS2A0A0J9YW53 1432 aa16.25■□□□□ 0.19
HPS1-213ENST00000497527 OVOS2Q6IE36 1432 aa16.25■□□□□ 0.19
HPS1-213ENST00000497527 USP31Q70CQ4 1352 aa16.25■□□□□ 0.19
HPS1-213ENST00000497527 C1orf167Q5SNV9 1468 aa16.24■□□□□ 0.19
HPS1-213ENST00000497527 ESCO1Q5FWF5 840 aa16.24■□□□□ 0.19
HPS1-213ENST00000497527 PIK3C2AO00443 1686 aa16.24■□□□□ 0.19
HPS1-213ENST00000497527 MST1RQ04912 1400 aa16.23■□□□□ 0.19
HPS1-213ENST00000497527 SMG6Q86US8 1419 aaKnown RBP16.23■□□□□ 0.19
HPS1-213ENST00000497527 NUDCQ9Y266 331 aa16.22■□□□□ 0.19
HPS1-213ENST00000497527 CDK12Q9NYV4 1490 aaPredicted RBP16.22■□□□□ 0.19
HPS1-213ENST00000497527 ZNF335Q9H4Z2 1342 aaPredicted RBP16.2■□□□□ 0.18
HPS1-213ENST00000497527 PSME1Q06323 249 aa16.2■□□□□ 0.18
HPS1-213ENST00000497527 COL3A1P02461 1466 aaPredicted RBP16.2■□□□□ 0.18
HPS1-213ENST00000497527 PNPLA6Q8IY17 1366 aa16.19■□□□□ 0.18
HPS1-213ENST00000497527 NGEFQ8N5V2 710 aa16.19■□□□□ 0.18
HPS1-213ENST00000497527 ADAMTS8Q9UP79 889 aa16.19■□□□□ 0.18
HPS1-213ENST00000497527 TRPM3Q9HCF6 1732 aaPredicted RBP16.19■□□□□ 0.18
HPS1-213ENST00000497527 MARF1Q9Y4F3 1742 aaKnown RBP16.19■□□□□ 0.18
HPS1-213ENST00000497527 PNNQ9H307 717 aaKnown RBP16.17■□□□□ 0.18
HPS1-213ENST00000497527 POLKQ9UBT6 870 aa16.17■□□□□ 0.18
HPS1-213ENST00000497527 KIF24Q5T7B8 1368 aa16.16■□□□□ 0.18
HPS1-213ENST00000497527 DIAPH1O60610 1272 aaKnown RBP16.16■□□□□ 0.18
HPS1-213ENST00000497527 ABTB2Q8N961 1025 aa16.16■□□□□ 0.18
HPS1-213ENST00000497527 ORAI2Q96SN7 254 aa16.16■□□□□ 0.18
HPS1-213ENST00000497527 PAK3O75914 559 aaPredicted RBP16.15■□□□□ 0.18
HPS1-213ENST00000497527 NLRP6P59044 892 aa16.15■□□□□ 0.18
HPS1-213ENST00000497527 PDE3BQ13370 1112 aa16.15■□□□□ 0.18
HPS1-213ENST00000497527 ZRANB1Q9UGI0 708 aa16.15■□□□□ 0.18
HPS1-213ENST00000497527 NPHP3Q7Z494 1330 aa16.15■□□□□ 0.18
HPS1-213ENST00000497527 ALS2Q96Q42 1657 aa16.14■□□□□ 0.17
HPS1-213ENST00000497527 LTN1O94822 1766 aa16.13■□□□□ 0.17
HPS1-213ENST00000497527 PPM1GO15355 546 aaPredicted RBP16.12■□□□□ 0.17
HPS1-213ENST00000497527 FOXO3O43524 673 aa16.12■□□□□ 0.17
HPS1-213ENST00000497527 KRT28Q7Z3Y7 464 aa16.12■□□□□ 0.17
HPS1-213ENST00000497527 KCNH5Q8NCM2 988 aa16.12■□□□□ 0.17
HPS1-213ENST00000497527 SBNO1A3KN83 1393 aa16.12■□□□□ 0.17
HPS1-213ENST00000497527 U2AF1L5P0DN76 240 aaPredicted RBP16.11■□□□□ 0.17
HPS1-213ENST00000497527 U2AF1Q01081 240 aaKnown RBP eCLIP16.11■□□□□ 0.17
HPS1-213ENST00000497527 NCBP3Q53F19 620 aaKnown RBP16.11■□□□□ 0.17
HPS1-213ENST00000497527 RUNDC1Q96C34 613 aa16.11■□□□□ 0.17
HPS1-213ENST00000497527 EMILIN1Q9Y6C2 1016 aa16.11■□□□□ 0.17
HPS1-213ENST00000497527 PHRF1Q9P1Y6 1649 aaKnown RBP16.11■□□□□ 0.17
HPS1-213ENST00000497527 FLT4P35916 1363 aa16.11■□□□□ 0.17
HPS1-213ENST00000497527 SLIT3O75094 1523 aa16.1■□□□□ 0.17
HPS1-213ENST00000497527 NEFMP07197 916 aa16.1■□□□□ 0.17
HPS1-213ENST00000497527 PEAK1Q9H792 1746 aa16.1■□□□□ 0.17
HPS1-213ENST00000497527 RTL1A6NKG5 1358 aa16.1■□□□□ 0.17
HPS1-213ENST00000497527 LTBP4Q8N2S1 1624 aa16.09■□□□□ 0.17
HPS1-213ENST00000497527 U2SURPO15042 1029 aaKnown RBP16.09■□□□□ 0.17
HPS1-213ENST00000497527 RRS1Q15050 365 aaKnown RBP16.09■□□□□ 0.17
HPS1-213ENST00000497527 NHSL1Q5SYE7 1610 aa16.08■□□□□ 0.17
HPS1-213ENST00000497527 SLAIN2Q9P270 581 aa16.08■□□□□ 0.16
HPS1-213ENST00000497527 FCHSD2O94868 740 aa16.07■□□□□ 0.16
HPS1-213ENST00000497527 CCDC146Q8IYE0 955 aa16.07■□□□□ 0.16
HPS1-213ENST00000497527 MAPK8IP3Q9UPT6 1336 aa16.07■□□□□ 0.16
HPS1-213ENST00000497527 TNS3Q68CZ2 1445 aa16.07■□□□□ 0.16
HPS1-213ENST00000497527 NFAT5O94916 1531 aa16.07■□□□□ 0.16
HPS1-213ENST00000497527 IQSEC2Q5JU85 1478 aa16.06■□□□□ 0.16
HPS1-213ENST00000497527 PXDNQ92626 1479 aa16.06■□□□□ 0.16
HPS1-213ENST00000497527 ARHGEF10O15013 1369 aa16.06■□□□□ 0.16
HPS1-213ENST00000497527 MAP3K19Q56UN5 1328 aa16.06■□□□□ 0.16
HPS1-213ENST00000497527 IL13P35225 146 aa16.06■□□□□ 0.16
HPS1-213ENST00000497527 AMPHP49418 695 aa16.06■□□□□ 0.16
HPS1-213ENST00000497527 RGPD1P0DJD0 1748 aa16.05■□□□□ 0.16
HPS1-213ENST00000497527 USP19O94966 1318 aa16.05■□□□□ 0.16
HPS1-213ENST00000497527 APAF1O14727 1248 aa16.05■□□□□ 0.16
HPS1-213ENST00000497527 FBLN1P23142 703 aa16.05■□□□□ 0.16
HPS1-213ENST00000497527 BRINP3Q76B58 766 aa16.05■□□□□ 0.16
HPS1-213ENST00000497527 MED1Q15648 1581 aaPredicted RBP16.04■□□□□ 0.16
HPS1-213ENST00000497527 SOX12O15370 315 aa16.04■□□□□ 0.16
HPS1-213ENST00000497527 NUTM2GQ5VZR2 741 aa16.04■□□□□ 0.16
HPS1-213ENST00000497527 XPCQ01831 940 aaPredicted RBP16.03■□□□□ 0.16
HPS1-213ENST00000497527 LMOD2Q6P5Q4 547 aa16.03■□□□□ 0.16
HPS1-213ENST00000497527 CCDC27Q2M243 656 aa16.02■□□□□ 0.16
HPS1-213ENST00000497527 TCP11L2Q8N4U5 519 aa16.02■□□□□ 0.16
HPS1-213ENST00000497527 SALL2Q9Y467 1007 aaPredicted RBP16.02■□□□□ 0.16
HPS1-213ENST00000497527 ABCC6O95255 1503 aa16.02■□□□□ 0.15
HPS1-213ENST00000497527 CRYBG1Q9Y4K1 1723 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms