RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 NRKQ7Z2Y5 1582 aa27.09■■□□□ 1.93
SCAMP3-209ENST00000497470 CGNL1Q0VF96 1302 aa27.08■■□□□ 1.93
SCAMP3-209ENST00000497470 TTC21BQ7Z4L5 1316 aa27.08■■□□□ 1.93
SCAMP3-209ENST00000497470 NSD3Q9BZ95 1437 aa27.06■■□□□ 1.92
SCAMP3-209ENST00000497470 TRPM3Q9HCF6 1732 aaPredicted RBP27.04■■□□□ 1.92
SCAMP3-209ENST00000497470 USP31Q70CQ4 1352 aa27.04■■□□□ 1.92
SCAMP3-209ENST00000497470 AMER1Q5JTC6 1135 aaPredicted RBP27.03■■□□□ 1.92
SCAMP3-209ENST00000497470 ARHGEF10O15013 1369 aa27.02■■□□□ 1.92
SCAMP3-209ENST00000497470 SPATA31A3Q5VYP0 1347 aa27.02■■□□□ 1.92
SCAMP3-209ENST00000497470 LRRC59Q96AG4 307 aaKnown RBP27.02■■□□□ 1.92
SCAMP3-209ENST00000497470 USP54Q70EL1 1684 aa27.01■■□□□ 1.91
SCAMP3-209ENST00000497470 TNS3Q68CZ2 1445 aa27■■□□□ 1.91
SCAMP3-209ENST00000497470 FYB1O15117 783 aa27■■□□□ 1.91
SCAMP3-209ENST00000497470 PIP4K2BP78356 416 aa26.99■■□□□ 1.91
SCAMP3-209ENST00000497470 ALS2Q96Q42 1657 aa26.98■■□□□ 1.91
SCAMP3-209ENST00000497470 SCAF1Q9H7N4 1312 aaKnown RBP26.97■■□□□ 1.91
SCAMP3-209ENST00000497470 NLRP13Q86W25 1043 aa26.96■■□□□ 1.91
SCAMP3-209ENST00000497470 FBXO41Q8TF61 875 aa26.96■■□□□ 1.91
SCAMP3-209ENST00000497470 COL16A1Q07092 1604 aaPredicted RBP26.95■■□□□ 1.91
SCAMP3-209ENST00000497470 OVOS2A0A0J9YW53 1432 aa26.94■■□□□ 1.9
SCAMP3-209ENST00000497470 OVOS2Q6IE36 1432 aa26.94■■□□□ 1.9
SCAMP3-209ENST00000497470 ABTB2Q8N961 1025 aa26.94■■□□□ 1.9
SCAMP3-209ENST00000497470 PHLPP1O60346 1717 aa26.93■■□□□ 1.9
SCAMP3-209ENST00000497470 MED1Q15648 1581 aaPredicted RBP26.93■■□□□ 1.9
SCAMP3-209ENST00000497470 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.92■■□□□ 1.9
SCAMP3-209ENST00000497470 DDX17Q92841 729 aaKnown RBP26.92■■□□□ 1.9
SCAMP3-209ENST00000497470 KIF20BQ96Q89 1820 aa26.92■■□□□ 1.9
SCAMP3-209ENST00000497470 PIK3C2AO00443 1686 aa26.92■■□□□ 1.9
SCAMP3-209ENST00000497470 USP19O94966 1318 aa26.91■■□□□ 1.9
SCAMP3-209ENST00000497470 PAK3O75914 559 aaPredicted RBP26.91■■□□□ 1.9
SCAMP3-209ENST00000497470 COG3Q96JB2 828 aa26.91■■□□□ 1.9
SCAMP3-209ENST00000497470 ANKRD26Q9UPS8 1709 aa26.9■■□□□ 1.9
SCAMP3-209ENST00000497470 RALBP1Q15311 655 aa26.9■■□□□ 1.9
SCAMP3-209ENST00000497470 NLRP6P59044 892 aa26.89■■□□□ 1.9
SCAMP3-209ENST00000497470 XPCQ01831 940 aaPredicted RBP26.89■■□□□ 1.9
SCAMP3-209ENST00000497470 NME9Q86XW9 330 aa26.89■■□□□ 1.9
SCAMP3-209ENST00000497470 COL22A1Q8NFW1 1626 aaPredicted RBP26.88■■□□□ 1.89
SCAMP3-209ENST00000497470 KCNH5Q8NCM2 988 aa26.88■■□□□ 1.89
SCAMP3-209ENST00000497470 AATKQ6ZMQ8 1374 aa26.87■■□□□ 1.89
SCAMP3-209ENST00000497470 PARD3Q8TEW0 1356 aa26.87■■□□□ 1.89
SCAMP3-209ENST00000497470 JCADQ9P266 1359 aa26.86■■□□□ 1.89
SCAMP3-209ENST00000497470 SLIT3O75094 1523 aa26.86■■□□□ 1.89
SCAMP3-209ENST00000497470 PNPLA6Q8IY17 1366 aa26.85■■□□□ 1.89
SCAMP3-209ENST00000497470 GGNBP2Q9H3C7 697 aa26.85■■□□□ 1.89
SCAMP3-209ENST00000497470 DIEXFQ68CQ4 756 aaKnown RBP26.84■■□□□ 1.89
SCAMP3-209ENST00000497470 MORC1Q86VD1 984 aa26.83■■□□□ 1.89
SCAMP3-209ENST00000497470 PRKRIP1Q9H875 184 aaPredicted RBP26.83■■□□□ 1.89
SCAMP3-209ENST00000497470 KIF24Q5T7B8 1368 aa26.83■■□□□ 1.88
SCAMP3-209ENST00000497470 SHPRHQ149N8 1683 aa26.82■■□□□ 1.88
SCAMP3-209ENST00000497470 MARF1Q9Y4F3 1742 aaKnown RBP26.82■■□□□ 1.88
SCAMP3-209ENST00000497470 ANP32CO43423 234 aa26.81■■□□□ 1.88
SCAMP3-209ENST00000497470 HSPA1LP34931 641 aa26.8■■□□□ 1.88
SCAMP3-209ENST00000497470 CC2D1BQ5T0F9 858 aaKnown RBP26.8■■□□□ 1.88
SCAMP3-209ENST00000497470 SPATA31A6Q5VVP1 1343 aa26.8■■□□□ 1.88
SCAMP3-209ENST00000497470 CRYBG1Q9Y4K1 1723 aa26.79■■□□□ 1.88
SCAMP3-209ENST00000497470 GCP02774 474 aa26.79■■□□□ 1.88
SCAMP3-209ENST00000497470 LMOD2Q6P5Q4 547 aa26.78■■□□□ 1.88
SCAMP3-209ENST00000497470 CPDO75976 1380 aa26.78■■□□□ 1.88
SCAMP3-209ENST00000497470 ZRANB1Q9UGI0 708 aa26.76■■□□□ 1.87
SCAMP3-209ENST00000497470 NFAT5O94916 1531 aa26.75■■□□□ 1.87
SCAMP3-209ENST00000497470 ABCC6O95255 1503 aa26.75■■□□□ 1.87
SCAMP3-209ENST00000497470 SMG6Q86US8 1419 aaKnown RBP26.74■■□□□ 1.87
SCAMP3-209ENST00000497470 PHRF1Q9P1Y6 1649 aaKnown RBP26.73■■□□□ 1.87
SCAMP3-209ENST00000497470 MYBBP1AQ9BQG0 1328 aaKnown RBP26.73■■□□□ 1.87
SCAMP3-209ENST00000497470 INSRP06213 1382 aa26.72■■□□□ 1.87
SCAMP3-209ENST00000497470 NUTM2GQ5VZR2 741 aa26.72■■□□□ 1.87
SCAMP3-209ENST00000497470 ARHGEF25Q86VW2 580 aa26.72■■□□□ 1.87
SCAMP3-209ENST00000497470 RTL1A6NKG5 1358 aa26.71■■□□□ 1.87
SCAMP3-209ENST00000497470 ABCA3Q99758 1704 aa26.7■■□□□ 1.87
SCAMP3-209ENST00000497470 PPP2R1AP30153 589 aa26.69■■□□□ 1.86
SCAMP3-209ENST00000497470 POLKQ9UBT6 870 aa26.69■■□□□ 1.86
SCAMP3-209ENST00000497470 MAP3K19Q56UN5 1328 aa26.65■■□□□ 1.86
SCAMP3-209ENST00000497470 CDK12Q9NYV4 1490 aaPredicted RBP26.64■■□□□ 1.86
SCAMP3-209ENST00000497470 FLT4P35916 1363 aa26.64■■□□□ 1.86
SCAMP3-209ENST00000497470 HAP1P54257 671 aaPredicted RBP26.64■■□□□ 1.86
SCAMP3-209ENST00000497470 CABLES1Q8TDN4 633 aa26.64■■□□□ 1.86
SCAMP3-209ENST00000497470 MAP2P11137 1827 aaKnown RBP26.63■■□□□ 1.85
SCAMP3-209ENST00000497470 CCER2I3L3R5 266 aa26.63■■□□□ 1.85
SCAMP3-209ENST00000497470 IP6K1Q92551 441 aa26.63■■□□□ 1.85
SCAMP3-209ENST00000497470 BLMP54132 1417 aaPredicted RBP26.63■■□□□ 1.85
SCAMP3-209ENST00000497470 MTHFSP49914 203 aa26.62■■□□□ 1.85
SCAMP3-209ENST00000497470 KIAA0232Q92628 1395 aa26.6■■□□□ 1.85
SCAMP3-209ENST00000497470 CFAP53Q96M91 514 aa26.59■■□□□ 1.85
SCAMP3-209ENST00000497470 TNNT2P45379 298 aaPredicted RBP26.58■■□□□ 1.85
SCAMP3-209ENST00000497470 RRS1Q15050 365 aaKnown RBP26.58■■□□□ 1.85
SCAMP3-209ENST00000497470 PRDM11Q9NQV5 511 aa26.58■■□□□ 1.85
SCAMP3-209ENST00000497470 LTN1O94822 1766 aa26.57■■□□□ 1.84
SCAMP3-209ENST00000497470 COL18A1P39060 1754 aa26.57■■□□□ 1.84
SCAMP3-209ENST00000497470 HOXC9P31274 260 aa26.57■■□□□ 1.84
SCAMP3-209ENST00000497470 AMPHP49418 695 aa26.57■■□□□ 1.84
SCAMP3-209ENST00000497470 ZC3H6P61129 1189 aaKnown RBP26.57■■□□□ 1.84
SCAMP3-209ENST00000497470 EMILIN1Q9Y6C2 1016 aa26.57■■□□□ 1.84
SCAMP3-209ENST00000497470 COL14A1Q05707 1796 aaKnown RBP26.56■■□□□ 1.84
SCAMP3-209ENST00000497470 LMO7Q8WWI1 1683 aa26.56■■□□□ 1.84
SCAMP3-209ENST00000497470 FBLN1P23142 703 aa26.54■■□□□ 1.84
SCAMP3-209ENST00000497470 FAM83GA6ND36 823 aa26.53■■□□□ 1.84
SCAMP3-209ENST00000497470 PEAK1Q9H792 1746 aa26.53■■□□□ 1.84
SCAMP3-209ENST00000497470 SOX12O15370 315 aa26.52■■□□□ 1.84
SCAMP3-209ENST00000497470 CNGB1Q14028 1251 aaPredicted RBP26.52■■□□□ 1.84
SCAMP3-209ENST00000497470 FNBP4Q8N3X1 1017 aaPredicted RBP26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms