RNA–Protein interactions for RNA: ENST00000497469.5

RNF220-218, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-218ENST00000497469 SBNO1A3KN83 1393 aa22.19■■□□□ 1.14
RNF220-218ENST00000497469 USP35Q9P2H5 1018 aa22.18■■□□□ 1.14
RNF220-218ENST00000497469 TECPR2O15040 1411 aa22.17■■□□□ 1.14
RNF220-218ENST00000497469 PLEKHH1Q9ULM0 1364 aa22.17■■□□□ 1.14
RNF220-218ENST00000497469 PHF8Q9UPP1 1060 aa22.17■■□□□ 1.14
RNF220-218ENST00000497469 CLTCL1P53675 1640 aa22.17■■□□□ 1.14
RNF220-218ENST00000497469 PELP1Q8IZL8 1130 aaKnown RBP22.16■■□□□ 1.14
RNF220-218ENST00000497469 STRN4Q9NRL3 753 aa22.16■■□□□ 1.14
RNF220-218ENST00000497469 STK26Q9P289 416 aa22.16■■□□□ 1.14
RNF220-218ENST00000497469 VPS8Q8N3P4 1428 aa22.15■■□□□ 1.14
RNF220-218ENST00000497469 NUP155O75694 1391 aa22.15■■□□□ 1.14
RNF220-218ENST00000497469 BCL11BQ9C0K0 894 aaPredicted RBP22.15■■□□□ 1.14
RNF220-218ENST00000497469 RGPD8O14715 1765 aaPredicted RBP22.14■■□□□ 1.13
RNF220-218ENST00000497469 SLC34A2O95436 690 aa22.11■■□□□ 1.13
RNF220-218ENST00000497469 SGIP1Q9BQI5 828 aa22.11■■□□□ 1.13
RNF220-218ENST00000497469 PRDM11Q9NQV5 511 aa22.11■■□□□ 1.13
RNF220-218ENST00000497469 NRXN1Q9ULB1 1477 aa22.1■■□□□ 1.13
RNF220-218ENST00000497469 COL13A1Q5TAT6 717 aaPredicted RBP22.1■■□□□ 1.13
RNF220-218ENST00000497469 VGFO15240 615 aaPredicted RBP22.09■■□□□ 1.13
RNF220-218ENST00000497469 ARXQ96QS3 562 aa22.09■■□□□ 1.13
RNF220-218ENST00000497469 GOLGB1Q14789 3259 aaKnown RBP22.09■■□□□ 1.13
RNF220-218ENST00000497469 FAM50AQ14320 339 aaKnown RBP22.08■■□□□ 1.13
RNF220-218ENST00000497469 CHRNA2Q15822 529 aa22.08■■□□□ 1.13
RNF220-218ENST00000497469 ATP10DQ9P241 1426 aa22.07■■□□□ 1.12
RNF220-218ENST00000497469 KLHL34Q8N239 644 aa22.07■■□□□ 1.12
RNF220-218ENST00000497469 MTFR1LQ9H019 292 aa22.07■■□□□ 1.12
RNF220-218ENST00000497469 PTF1AQ7RTS3 328 aa22.06■■□□□ 1.12
RNF220-218ENST00000497469 PMFBP1Q8TBY8 1022 aa22.06■■□□□ 1.12
RNF220-218ENST00000497469 RGPD3A6NKT7 1758 aaPredicted RBP22.06■■□□□ 1.12
RNF220-218ENST00000497469 RGPD4Q7Z3J3 1758 aa22.06■■□□□ 1.12
RNF220-218ENST00000497469 IFT172Q9UG01 1749 aa22.04■■□□□ 1.12
RNF220-218ENST00000497469 TRPM3Q9HCF6 1732 aaPredicted RBP22.03■■□□□ 1.12
RNF220-218ENST00000497469 MAP3K5Q99683 1374 aa22.03■■□□□ 1.12
RNF220-218ENST00000497469 PROM2Q8N271 834 aa22.03■■□□□ 1.12
RNF220-218ENST00000497469 STK32BQ9NY57 414 aa22.03■■□□□ 1.12
RNF220-218ENST00000497469 KIF1BO60333 1816 aa22.03■■□□□ 1.12
RNF220-218ENST00000497469 PLSCR1O15162 318 aa22.02■■□□□ 1.12
RNF220-218ENST00000497469 PRELPP51888 382 aa22.02■■□□□ 1.12
RNF220-218ENST00000497469 ALS2Q96Q42 1657 aa22.01■■□□□ 1.11
RNF220-218ENST00000497469 KIAA0232Q92628 1395 aa22.01■■□□□ 1.11
RNF220-218ENST00000497469 CRYBG1Q9Y4K1 1723 aa22.01■■□□□ 1.11
RNF220-218ENST00000497469 BARGINQ6ZT62 677 aa22.01■■□□□ 1.11
RNF220-218ENST00000497469 ZNF526Q8TF50 670 aaPredicted RBP22.01■■□□□ 1.11
RNF220-218ENST00000497469 GPBP1L1Q9HC44 474 aaPredicted RBP22■■□□□ 1.11
RNF220-218ENST00000497469 SLC15A2Q16348 729 aa21.98■■□□□ 1.11
RNF220-218ENST00000497469 TNS4Q8IZW8 715 aa21.98■■□□□ 1.11
RNF220-218ENST00000497469 SSH2Q76I76 1423 aa21.97■■□□□ 1.11
RNF220-218ENST00000497469 TMEM132EQ6IEE7 984 aa21.96■■□□□ 1.11
RNF220-218ENST00000497469 PEAK1Q9H792 1746 aa21.96■■□□□ 1.11
RNF220-218ENST00000497469 OVOS2A0A0G2JMS6 1433 aa21.96■■□□□ 1.11
RNF220-218ENST00000497469 OVOS2A0A0J9YW53 1432 aa21.96■■□□□ 1.11
RNF220-218ENST00000497469 OVOS2Q6IE36 1432 aa21.96■■□□□ 1.11
RNF220-218ENST00000497469 LARP1Q6PKG0 1096 aaKnown RBP21.95■■□□□ 1.1
RNF220-218ENST00000497469 EVA1CP58658 441 aa21.94■■□□□ 1.1
RNF220-218ENST00000497469 TCP11L2Q8N4U5 519 aa21.94■■□□□ 1.1
RNF220-218ENST00000497469 KNDC1Q76NI1 1749 aa21.94■■□□□ 1.1
RNF220-218ENST00000497469 PPLO60437 1756 aa21.94■■□□□ 1.1
RNF220-218ENST00000497469 ZC3H6P61129 1189 aaKnown RBP21.93■■□□□ 1.1
RNF220-218ENST00000497469 SBF2Q86WG5 1849 aa21.93■■□□□ 1.1
RNF220-218ENST00000497469 NLGN2Q8NFZ4 835 aa21.93■■□□□ 1.1
RNF220-218ENST00000497469 YBX3P16989 372 aaKnown RBP eCLIP21.92■■□□□ 1.1
RNF220-218ENST00000497469 ABCC11Q96J66 1382 aa21.91■■□□□ 1.1
RNF220-218ENST00000497469 PARP4Q9UKK3 1724 aaKnown RBP21.91■■□□□ 1.1
RNF220-218ENST00000497469 PAK3O75914 559 aaPredicted RBP21.9■■□□□ 1.1
RNF220-218ENST00000497469 TXNRD1Q16881 649 aa21.9■■□□□ 1.1
RNF220-218ENST00000497469 DNAJC5GQ8N7S2 189 aa21.9■■□□□ 1.1
RNF220-218ENST00000497469 ADGRF5Q8IZF2 1346 aa21.89■■□□□ 1.1
RNF220-218ENST00000497469 SAFB2Q14151 953 aaKnown RBP eCLIP21.89■■□□□ 1.09
RNF220-218ENST00000497469 GPRASP1Q5JY77 1395 aa21.88■■□□□ 1.09
RNF220-218ENST00000497469 RPGRIP1LQ68CZ1 1315 aa21.87■■□□□ 1.09
RNF220-218ENST00000497469 ACIN1Q9UKV3 1341 aaKnown RBP21.87■■□□□ 1.09
RNF220-218ENST00000497469 APLP1P51693 650 aa21.87■■□□□ 1.09
RNF220-218ENST00000497469 PHRF1Q9P1Y6 1649 aaKnown RBP21.87■■□□□ 1.09
RNF220-218ENST00000497469 ATP7BP35670 1465 aa21.84■■□□□ 1.09
RNF220-218ENST00000497469 C11orf95C9JLR9 678 aaPredicted RBP21.84■■□□□ 1.09
RNF220-218ENST00000497469 LRRC37A3O60309 1634 aa21.84■■□□□ 1.09
RNF220-218ENST00000497469 YTHDC2Q9H6S0 1430 aaKnown RBP21.83■■□□□ 1.09
RNF220-218ENST00000497469 NUTM2GQ5VZR2 741 aa21.83■■□□□ 1.09
RNF220-218ENST00000497469 GRIN3BO60391 1043 aa21.82■■□□□ 1.08
RNF220-218ENST00000497469 ADCY9O60503 1353 aa21.81■■□□□ 1.08
RNF220-218ENST00000497469 ROCK1Q13464 1354 aa21.81■■□□□ 1.08
RNF220-218ENST00000497469 ANKARQ7Z5J8 1434 aa21.8■■□□□ 1.08
RNF220-218ENST00000497469 APLP2Q06481 763 aa21.8■■□□□ 1.08
RNF220-218ENST00000497469 THRAP3Q9Y2W1 955 aaKnown RBP21.8■■□□□ 1.08
RNF220-218ENST00000497469 DHX57Q6P158 1386 aaKnown RBP21.79■■□□□ 1.08
RNF220-218ENST00000497469 KIF3CO14782 793 aa21.79■■□□□ 1.08
RNF220-218ENST00000497469 TOPAZ1Q8N9V7 1692 aa21.79■■□□□ 1.08
RNF220-218ENST00000497469 DDB1Q16531 1140 aa21.77■■□□□ 1.08
RNF220-218ENST00000497469 ZNF827Q17R98 1081 aa21.77■■□□□ 1.08
RNF220-218ENST00000497469 HTRA3P83110 453 aa21.76■■□□□ 1.07
RNF220-218ENST00000497469 LMO7Q8WWI1 1683 aa21.75■■□□□ 1.07
RNF220-218ENST00000497469 POLD1P28340 1107 aa21.75■■□□□ 1.07
RNF220-218ENST00000497469 MARCH10Q8NA82 808 aaPredicted RBP21.75■■□□□ 1.07
RNF220-218ENST00000497469 PRAM1Q96QH2 718 aa21.75■■□□□ 1.07
RNF220-218ENST00000497469 PAPPAQ13219 1627 aa21.75■■□□□ 1.07
RNF220-218ENST00000497469 PRR36Q9H6K5 1346 aa21.75■■□□□ 1.07
RNF220-218ENST00000497469 NGDNQ8NEJ9 315 aaKnown RBP21.74■■□□□ 1.07
RNF220-218ENST00000497469 ITGAEP38570 1179 aa21.73■■□□□ 1.07
RNF220-218ENST00000497469 HIRIP3Q9BW71 556 aaPredicted RBP21.73■■□□□ 1.07
RNF220-218ENST00000497469 PCDH10Q9P2E7 1040 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms