RNA–Protein interactions for RNA: ENST00000497282.1

EFNA1-205, Transcript of ephrin A1, human

TSL 2

Gene EFNA1, Length 719 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFNA1-205	ENST00000497282	ARHGEF10	O15013	1369 aa		11.28	□□□□□ -0.6
EFNA1-205	ENST00000497282	USP54	Q70EL1	1684 aa		11.27	□□□□□ -0.6
EFNA1-205	ENST00000497282	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.27	□□□□□ -0.61
EFNA1-205	ENST00000497282	NUTM2E	B1AL46	878 aa	Predicted RBP	11.27	□□□□□ -0.61
EFNA1-205	ENST00000497282	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.27	□□□□□ -0.61
EFNA1-205	ENST00000497282	SLC12A5	Q9H2X9	1139 aa		11.27	□□□□□ -0.61
EFNA1-205	ENST00000497282	NINL	Q9Y2I6	1382 aa		11.27	□□□□□ -0.61
EFNA1-205	ENST00000497282	SLC24A1	O60721	1099 aa		11.26	□□□□□ -0.61
EFNA1-205	ENST00000497282	KTN1	Q86UP2	1357 aa	Known RBP	11.26	□□□□□ -0.61
EFNA1-205	ENST00000497282	PLCH1	Q4KWH8	1693 aa		11.25	□□□□□ -0.61
EFNA1-205	ENST00000497282	C11orf95	C9JLR9	678 aa	Predicted RBP	11.25	□□□□□ -0.61
EFNA1-205	ENST00000497282	PAK3	O75914	559 aa	Predicted RBP	11.25	□□□□□ -0.61
EFNA1-205	ENST00000497282	LMOD2	Q6P5Q4	547 aa		11.25	□□□□□ -0.61
EFNA1-205	ENST00000497282	TMC1	Q8TDI8	760 aa		11.25	□□□□□ -0.61
EFNA1-205	ENST00000497282	CABLES1	Q8TDN4	633 aa		11.25	□□□□□ -0.61
EFNA1-205	ENST00000497282	BRD4	O60885	1362 aa	Predicted RBP	11.25	□□□□□ -0.61
EFNA1-205	ENST00000497282	ANKRD36B	Q8N2N9	1353 aa		11.25	□□□□□ -0.61
EFNA1-205	ENST00000497282	SLIT3	O75094	1523 aa		11.25	□□□□□ -0.61
EFNA1-205	ENST00000497282	PLEKHG5	O94827	1062 aa		11.24	□□□□□ -0.61
EFNA1-205	ENST00000497282	EDC4	Q6P2E9	1401 aa	Known RBP	11.24	□□□□□ -0.61
EFNA1-205	ENST00000497282	KIF20B	Q96Q89	1820 aa		11.23	□□□□□ -0.61
EFNA1-205	ENST00000497282	ADAMTS2	O95450	1211 aa		11.23	□□□□□ -0.61
EFNA1-205	ENST00000497282	NUTM2G	Q5VZR2	741 aa		11.23	□□□□□ -0.61
EFNA1-205	ENST00000497282	USP19	O94966	1318 aa		11.23	□□□□□ -0.61
EFNA1-205	ENST00000497282	TTC21B	Q7Z4L5	1316 aa		11.23	□□□□□ -0.61
EFNA1-205	ENST00000497282	CDCA8	Q53HL2	280 aa		11.22	□□□□□ -0.61
EFNA1-205	ENST00000497282	NRAP	Q86VF7	1730 aa		11.22	□□□□□ -0.61
EFNA1-205	ENST00000497282	ZNF692	Q9BU19	519 aa	Predicted RBP	11.22	□□□□□ -0.61
EFNA1-205	ENST00000497282	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	11.22	□□□□□ -0.61
EFNA1-205	ENST00000497282	RGS17	Q9UGC6	210 aa	Predicted RBP	11.22	□□□□□ -0.61
EFNA1-205	ENST00000497282	COL14A1	Q05707	1796 aa	Known RBP	11.21	□□□□□ -0.61
EFNA1-205	ENST00000497282	KIF7	Q2M1P5	1343 aa		11.21	□□□□□ -0.61
EFNA1-205	ENST00000497282	TTC21A	Q8NDW8	1320 aa		11.21	□□□□□ -0.61
EFNA1-205	ENST00000497282	MEX3C	Q5U5Q3	659 aa	Known RBP	11.21	□□□□□ -0.61
EFNA1-205	ENST00000497282	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	11.21	□□□□□ -0.61
EFNA1-205	ENST00000497282	ABTB2	Q8N961	1025 aa		11.21	□□□□□ -0.61
EFNA1-205	ENST00000497282	TERF2IP	Q9NYB0	399 aa		11.21	□□□□□ -0.61
EFNA1-205	ENST00000497282	NWD2	Q9ULI1	1742 aa		11.21	□□□□□ -0.62
EFNA1-205	ENST00000497282	LMO7	Q8WWI1	1683 aa		11.2	□□□□□ -0.62
EFNA1-205	ENST00000497282	NFAT5	O94916	1531 aa		11.2	□□□□□ -0.62
EFNA1-205	ENST00000497282	OVOS2	A0A0J9YW53	1432 aa		11.2	□□□□□ -0.62
EFNA1-205	ENST00000497282	OVOS2	Q6IE36	1432 aa		11.2	□□□□□ -0.62
EFNA1-205	ENST00000497282	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
EFNA1-205	ENST00000497282	C8orf37	Q96NL8	207 aa		11.2	□□□□□ -0.62
EFNA1-205	ENST00000497282	POLR3GL	Q9BT43	218 aa		11.2	□□□□□ -0.62
EFNA1-205	ENST00000497282	SLIT2	O94813	1529 aa		11.19	□□□□□ -0.62
EFNA1-205	ENST00000497282	NME9	Q86XW9	330 aa		11.19	□□□□□ -0.62
EFNA1-205	ENST00000497282	PHF23	Q9BUL5	403 aa	Predicted RBP	11.19	□□□□□ -0.62
EFNA1-205	ENST00000497282	ZRANB1	Q9UGI0	708 aa		11.19	□□□□□ -0.62
EFNA1-205	ENST00000497282	NSD3	Q9BZ95	1437 aa		11.18	□□□□□ -0.62
EFNA1-205	ENST00000497282	ANKRD26	Q9UPS8	1709 aa		11.18	□□□□□ -0.62
EFNA1-205	ENST00000497282	USP31	Q70CQ4	1352 aa		11.18	□□□□□ -0.62
EFNA1-205	ENST00000497282	CCDC7	Q96M83	1385 aa		11.18	□□□□□ -0.62
EFNA1-205	ENST00000497282	AFF2	P51816	1311 aa		11.18	□□□□□ -0.62
EFNA1-205	ENST00000497282	HAP1	P54257	671 aa	Predicted RBP	11.18	□□□□□ -0.62
EFNA1-205	ENST00000497282	NLRP6	P59044	892 aa		11.18	□□□□□ -0.62
EFNA1-205	ENST00000497282	CARD14	Q9BXL6	1004 aa		11.18	□□□□□ -0.62
EFNA1-205	ENST00000497282	LTN1	O94822	1766 aa		11.18	□□□□□ -0.62
EFNA1-205	ENST00000497282	COL18A1	P39060	1754 aa		11.18	□□□□□ -0.62
EFNA1-205	ENST00000497282	BCL9L	Q86UU0	1499 aa		11.18	□□□□□ -0.62
EFNA1-205	ENST00000497282	KIAA0232	Q92628	1395 aa		11.17	□□□□□ -0.62
EFNA1-205	ENST00000497282	WASHC2A	Q641Q2	1341 aa		11.17	□□□□□ -0.62
EFNA1-205	ENST00000497282	NLRP13	Q86W25	1043 aa		11.17	□□□□□ -0.62
EFNA1-205	ENST00000497282	POTEA	Q6S8J7	498 aa		11.16	□□□□□ -0.62
EFNA1-205	ENST00000497282	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.16	□□□□□ -0.62
EFNA1-205	ENST00000497282	NGLY1	Q96IV0	654 aa		11.16	□□□□□ -0.62
EFNA1-205	ENST00000497282	RGPD5	Q99666	1765 aa		11.16	□□□□□ -0.62
EFNA1-205	ENST00000497282	CPD	O75976	1380 aa		11.16	□□□□□ -0.62
EFNA1-205	ENST00000497282	CAMTA1	Q9Y6Y1	1673 aa		11.15	□□□□□ -0.62
EFNA1-205	ENST00000497282	FAM83G	A6ND36	823 aa		11.15	□□□□□ -0.62
EFNA1-205	ENST00000497282	GC	P02774	474 aa		11.15	□□□□□ -0.62
EFNA1-205	ENST00000497282	ZEB1	P37275	1124 aa	Predicted RBP	11.15	□□□□□ -0.62
EFNA1-205	ENST00000497282	ZC3H6	P61129	1189 aa	Known RBP	11.15	□□□□□ -0.62
EFNA1-205	ENST00000497282	GLI3	P10071	1580 aa		11.15	□□□□□ -0.62
EFNA1-205	ENST00000497282	CHRNA2	Q15822	529 aa		11.14	□□□□□ -0.63
EFNA1-205	ENST00000497282	PRDM11	Q9NQV5	511 aa		11.14	□□□□□ -0.63
EFNA1-205	ENST00000497282	ATRN	O75882	1429 aa		11.14	□□□□□ -0.63
EFNA1-205	ENST00000497282	FYB1	O15117	783 aa		11.13	□□□□□ -0.63
EFNA1-205	ENST00000497282	SOX12	O15370	315 aa		11.13	□□□□□ -0.63
EFNA1-205	ENST00000497282	ZNF772	Q68DY9	489 aa	Predicted RBP	11.13	□□□□□ -0.63
EFNA1-205	ENST00000497282	ILDR2	Q71H61	639 aa		11.13	□□□□□ -0.63
EFNA1-205	ENST00000497282	PANK3	Q9H999	370 aa		11.13	□□□□□ -0.63
EFNA1-205	ENST00000497282	USP21	Q9UK80	565 aa		11.13	□□□□□ -0.63
EFNA1-205	ENST00000497282	ABCC6	O95255	1503 aa		11.13	□□□□□ -0.63
EFNA1-205	ENST00000497282	PEAK1	Q9H792	1746 aa		11.12	□□□□□ -0.63
EFNA1-205	ENST00000497282	GGNBP2	Q9H3C7	697 aa		11.12	□□□□□ -0.63
EFNA1-205	ENST00000497282	COL5A2	P05997	1499 aa	Predicted RBP	11.12	□□□□□ -0.63
EFNA1-205	ENST00000497282	ARHGEF25	Q86VW2	580 aa		11.11	□□□□□ -0.63
EFNA1-205	ENST00000497282	BTG4	Q9NY30	223 aa		11.11	□□□□□ -0.63
EFNA1-205	ENST00000497282	FBLN1	P23142	703 aa		11.1	□□□□□ -0.63
EFNA1-205	ENST00000497282	UNC5CL	Q8IV45	518 aa		11.1	□□□□□ -0.63
EFNA1-205	ENST00000497282	KCNH5	Q8NCM2	988 aa		11.1	□□□□□ -0.63
EFNA1-205	ENST00000497282	COG3	Q96JB2	828 aa		11.1	□□□□□ -0.63
EFNA1-205	ENST00000497282	AATK	Q6ZMQ8	1374 aa		11.1	□□□□□ -0.63
EFNA1-205	ENST00000497282	CGNL1	Q0VF96	1302 aa		11.09	□□□□□ -0.63
EFNA1-205	ENST00000497282	RGS12	O14924	1447 aa		11.09	□□□□□ -0.63
EFNA1-205	ENST00000497282	WNK3	Q9BYP7	1800 aa		11.09	□□□□□ -0.63
EFNA1-205	ENST00000497282	ZBTB7C	A1YPR0	619 aa		11.09	□□□□□ -0.63
EFNA1-205	ENST00000497282	QTRT2	Q9H974	415 aa	Known RBP	11.09	□□□□□ -0.63
EFNA1-205	ENST00000497282	TRPC5	Q9UL62	973 aa	Predicted RBP	11.09	□□□□□ -0.63

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