RNA–Protein interactions for RNA: ENST00000497188.1

CLK2-207, Transcript of CDC like kinase 2, humanhuman

TSL 2

Gene CLK2, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-207ENST00000497188 KIF20BQ96Q89 1820 aa15.67■□□□□ 0.1
CLK2-207ENST00000497188 USP6P35125 1406 aa15.67■□□□□ 0.1
CLK2-207ENST00000497188 POLR3AO14802 1390 aaPredicted RBP15.67■□□□□ 0.1
CLK2-207ENST00000497188 SENP3-EIF4A1A0A087X0R7 540 aa15.67■□□□□ 0.1
CLK2-207ENST00000497188 FOXO3O43524 673 aa15.66■□□□□ 0.1
CLK2-207ENST00000497188 XPCQ01831 940 aaPredicted RBP15.66■□□□□ 0.1
CLK2-207ENST00000497188 NSD2O96028 1365 aa15.65■□□□□ 0.1
CLK2-207ENST00000497188 MSH6P52701 1360 aa15.65■□□□□ 0.1
CLK2-207ENST00000497188 C1orf167Q5SNV9 1468 aa15.64■□□□□ 0.09
CLK2-207ENST00000497188 MTHFSP49914 203 aa15.64■□□□□ 0.09
CLK2-207ENST00000497188 NCOA3Q9Y6Q9 1424 aa15.64■□□□□ 0.09
CLK2-207ENST00000497188 PAK3O75914 559 aaPredicted RBP15.64■□□□□ 0.09
CLK2-207ENST00000497188 DDX17Q92841 729 aaKnown RBP15.64■□□□□ 0.09
CLK2-207ENST00000497188 SSH2Q76I76 1423 aa15.64■□□□□ 0.09
CLK2-207ENST00000497188 NUTM2GQ5VZR2 741 aa15.63■□□□□ 0.09
CLK2-207ENST00000497188 NRKQ7Z2Y5 1582 aa15.63■□□□□ 0.09
CLK2-207ENST00000497188 ANKRD26Q9UPS8 1709 aa15.63■□□□□ 0.09
CLK2-207ENST00000497188 MST1RQ04912 1400 aa15.63■□□□□ 0.09
CLK2-207ENST00000497188 PSME1Q06323 249 aa15.63■□□□□ 0.09
CLK2-207ENST00000497188 CADPS2Q86UW7 1296 aa15.63■□□□□ 0.09
CLK2-207ENST00000497188 COG3Q96JB2 828 aa15.61■□□□□ 0.09
CLK2-207ENST00000497188 MAP2P11137 1827 aaKnown RBP15.61■□□□□ 0.09
CLK2-207ENST00000497188 SOX12O15370 315 aa15.61■□□□□ 0.09
CLK2-207ENST00000497188 HNRNPUQ00839 825 aaKnown RBP eCLIP15.6■□□□□ 0.09
CLK2-207ENST00000497188 DCCP43146 1447 aa15.6■□□□□ 0.09
CLK2-207ENST00000497188 PPM1GO15355 546 aaPredicted RBP15.59■□□□□ 0.09
CLK2-207ENST00000497188 RRS1Q15050 365 aaKnown RBP15.59■□□□□ 0.09
CLK2-207ENST00000497188 ABTB2Q8N961 1025 aa15.59■□□□□ 0.09
CLK2-207ENST00000497188 PLEKHG5O94827 1062 aa15.58■□□□□ 0.08
CLK2-207ENST00000497188 NLRP6P59044 892 aa15.58■□□□□ 0.08
CLK2-207ENST00000497188 ADAMTS8Q9UP79 889 aa15.58■□□□□ 0.08
CLK2-207ENST00000497188 TTC21AQ8NDW8 1320 aa15.58■□□□□ 0.08
CLK2-207ENST00000497188 SLAIN2Q9P270 581 aa15.58■□□□□ 0.08
CLK2-207ENST00000497188 POLKQ9UBT6 870 aa15.58■□□□□ 0.08
CLK2-207ENST00000497188 EMILIN1Q9Y6C2 1016 aa15.58■□□□□ 0.08
CLK2-207ENST00000497188 PIK3C2AO00443 1686 aa15.57■□□□□ 0.08
CLK2-207ENST00000497188 KRT28Q7Z3Y7 464 aa15.57■□□□□ 0.08
CLK2-207ENST00000497188 LMOD2Q6P5Q4 547 aa15.56■□□□□ 0.08
CLK2-207ENST00000497188 OVOS2A0A0J9YW53 1432 aa15.56■□□□□ 0.08
CLK2-207ENST00000497188 OVOS2Q6IE36 1432 aa15.56■□□□□ 0.08
CLK2-207ENST00000497188 BRINP3Q76B58 766 aa15.55■□□□□ 0.08
CLK2-207ENST00000497188 LTBP4Q8N2S1 1624 aa15.55■□□□□ 0.08
CLK2-207ENST00000497188 WDR43Q15061 677 aaKnown RBP eCLIP15.54■□□□□ 0.08
CLK2-207ENST00000497188 SCAF1Q9H7N4 1312 aaKnown RBP15.53■□□□□ 0.08
CLK2-207ENST00000497188 MARF1Q9Y4F3 1742 aaKnown RBP15.52■□□□□ 0.08
CLK2-207ENST00000497188 KIF1AQ12756 1690 aa15.52■□□□□ 0.08
CLK2-207ENST00000497188 CFAP53Q96M91 514 aa15.52■□□□□ 0.08
CLK2-207ENST00000497188 SALL2Q9Y467 1007 aaPredicted RBP15.52■□□□□ 0.08
CLK2-207ENST00000497188 USP31Q70CQ4 1352 aa15.52■□□□□ 0.07
CLK2-207ENST00000497188 CENPBP07199 599 aaPredicted RBP15.51■□□□□ 0.07
CLK2-207ENST00000497188 CCDC146Q8IYE0 955 aa15.51■□□□□ 0.07
CLK2-207ENST00000497188 SHPRHQ149N8 1683 aa15.51■□□□□ 0.07
CLK2-207ENST00000497188 AATKQ6ZMQ8 1374 aa15.51■□□□□ 0.07
CLK2-207ENST00000497188 TRPM3Q9HCF6 1732 aaPredicted RBP15.5■□□□□ 0.07
CLK2-207ENST00000497188 NPHP3Q7Z494 1330 aa15.49■□□□□ 0.07
CLK2-207ENST00000497188 COL3A1P02461 1466 aaPredicted RBP15.49■□□□□ 0.07
CLK2-207ENST00000497188 PNPLA6Q8IY17 1366 aa15.48■□□□□ 0.07
CLK2-207ENST00000497188 MAP3K19Q56UN5 1328 aa15.48■□□□□ 0.07
CLK2-207ENST00000497188 U2SURPO15042 1029 aaKnown RBP15.48■□□□□ 0.07
CLK2-207ENST00000497188 DIAPH1O60610 1272 aaKnown RBP15.47■□□□□ 0.07
CLK2-207ENST00000497188 U2AF1L5P0DN76 240 aaPredicted RBP15.47■□□□□ 0.07
CLK2-207ENST00000497188 U2AF1Q01081 240 aaKnown RBP eCLIP15.47■□□□□ 0.07
CLK2-207ENST00000497188 HSP90AB2PQ58FF8 381 aa15.47■□□□□ 0.07
CLK2-207ENST00000497188 PEAK1Q9H792 1746 aa15.47■□□□□ 0.07
CLK2-207ENST00000497188 CABLES1Q8TDN4 633 aa15.46■□□□□ 0.07
CLK2-207ENST00000497188 PXDNQ92626 1479 aa15.46■□□□□ 0.07
CLK2-207ENST00000497188 ZBTB7CA1YPR0 619 aa15.45■□□□□ 0.06
CLK2-207ENST00000497188 BLMP54132 1417 aaPredicted RBP15.45■□□□□ 0.06
CLK2-207ENST00000497188 SMG6Q86US8 1419 aaKnown RBP15.45■□□□□ 0.06
CLK2-207ENST00000497188 GCP02774 474 aa15.45■□□□□ 0.06
CLK2-207ENST00000497188 ALS2Q96Q42 1657 aa15.44■□□□□ 0.06
CLK2-207ENST00000497188 INSRP06213 1382 aa15.44■□□□□ 0.06
CLK2-207ENST00000497188 IL13P35225 146 aa15.44■□□□□ 0.06
CLK2-207ENST00000497188 AMPHP49418 695 aa15.44■□□□□ 0.06
CLK2-207ENST00000497188 USP54Q70EL1 1684 aa15.44■□□□□ 0.06
CLK2-207ENST00000497188 NUDCQ9Y266 331 aa15.44■□□□□ 0.06
CLK2-207ENST00000497188 SPATA31A3Q5VYP0 1347 aa15.43■□□□□ 0.06
CLK2-207ENST00000497188 ZBED9Q6R2W3 1325 aa15.43■□□□□ 0.06
CLK2-207ENST00000497188 CDK12Q9NYV4 1490 aaPredicted RBP15.43■□□□□ 0.06
CLK2-207ENST00000497188 APAF1O14727 1248 aa15.43■□□□□ 0.06
CLK2-207ENST00000497188 EIF4A2Q14240 407 aaKnown RBP15.43■□□□□ 0.06
CLK2-207ENST00000497188 SBNO1A3KN83 1393 aa15.42■□□□□ 0.06
CLK2-207ENST00000497188 SOS2Q07890 1332 aaPredicted RBP15.42■□□□□ 0.06
CLK2-207ENST00000497188 HMOX1P09601 288 aa15.42■□□□□ 0.06
CLK2-207ENST00000497188 LTN1O94822 1766 aa15.41■□□□□ 0.06
CLK2-207ENST00000497188 ZC3H6P61129 1189 aaKnown RBP15.41■□□□□ 0.06
CLK2-207ENST00000497188 TNS3Q68CZ2 1445 aa15.41■□□□□ 0.06
CLK2-207ENST00000497188 NFAT5O94916 1531 aa15.41■□□□□ 0.06
CLK2-207ENST00000497188 PIP4K2BP78356 416 aa15.41■□□□□ 0.06
CLK2-207ENST00000497188 USP19O94966 1318 aa15.41■□□□□ 0.06
CLK2-207ENST00000497188 MED1Q15648 1581 aaPredicted RBP15.4■□□□□ 0.06
CLK2-207ENST00000497188 ROBO1Q9Y6N7 1651 aa15.4■□□□□ 0.06
CLK2-207ENST00000497188 HOXC9P31274 260 aa15.4■□□□□ 0.06
CLK2-207ENST00000497188 KCNH5Q8NCM2 988 aa15.4■□□□□ 0.06
CLK2-207ENST00000497188 LTV1Q96GA3 475 aaPredicted RBP15.4■□□□□ 0.06
CLK2-207ENST00000497188 RRP7AQ9Y3A4 280 aaKnown RBP15.4■□□□□ 0.06
CLK2-207ENST00000497188 NEUROD2Q15784 382 aa15.39■□□□□ 0.05
CLK2-207ENST00000497188 FLT4P35916 1363 aa15.39■□□□□ 0.05
CLK2-207ENST00000497188 RUNDC1Q96C34 613 aa15.38■□□□□ 0.05
CLK2-207ENST00000497188 ARHGEF25Q86VW2 580 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms