RNA–Protein interactions for RNA: ENST00000496908.5

MECP2-211, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 342 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-211ENST00000496908 NRAPQ86VF7 1730 aa19.99■□□□□ 0.79
MECP2-211ENST00000496908 CENPJQ9HC77 1338 aaPredicted RBP19.99■□□□□ 0.79
MECP2-211ENST00000496908 POLR3AO14802 1390 aaPredicted RBP19.98■□□□□ 0.79
MECP2-211ENST00000496908 PAK3O75914 559 aaPredicted RBP19.98■□□□□ 0.79
MECP2-211ENST00000496908 NEUROD1Q13562 356 aa19.98■□□□□ 0.79
MECP2-211ENST00000496908 VPS72Q15906 364 aa19.97■□□□□ 0.79
MECP2-211ENST00000496908 COL14A1Q05707 1796 aaKnown RBP19.96■□□□□ 0.79
MECP2-211ENST00000496908 CCDC61Q9Y6R9 512 aa19.96■□□□□ 0.79
MECP2-211ENST00000496908 BRWD3Q6RI45 1802 aa19.96■□□□□ 0.79
MECP2-211ENST00000496908 ACEP12821 1306 aa19.96■□□□□ 0.79
MECP2-211ENST00000496908 PHRF1Q9P1Y6 1649 aaKnown RBP19.95■□□□□ 0.78
MECP2-211ENST00000496908 PLEKHG3A1L390 1219 aa19.94■□□□□ 0.78
MECP2-211ENST00000496908 NBPF8Q3BBV2 869 aa19.94■□□□□ 0.78
MECP2-211ENST00000496908 CABP2Q9NPB3 220 aa19.93■□□□□ 0.78
MECP2-211ENST00000496908 BTG4Q9NY30 223 aa19.93■□□□□ 0.78
MECP2-211ENST00000496908 SRPK2P78362 688 aaKnown RBP19.92■□□□□ 0.78
MECP2-211ENST00000496908 CCDC9Q9Y3X0 531 aaKnown RBP19.92■□□□□ 0.78
MECP2-211ENST00000496908 PPIP5K1Q6PFW1 1433 aa19.92■□□□□ 0.78
MECP2-211ENST00000496908 NUTM2GQ5VZR2 741 aa19.91■□□□□ 0.78
MECP2-211ENST00000496908 SEPT12Q8IYM1 358 aa19.91■□□□□ 0.78
MECP2-211ENST00000496908 ROCK2O75116 1388 aaKnown RBP19.9■□□□□ 0.78
MECP2-211ENST00000496908 ONECUT3O60422 494 aaPredicted RBP19.89■□□□□ 0.77
MECP2-211ENST00000496908 KIAA0232Q92628 1395 aa19.89■□□□□ 0.77
MECP2-211ENST00000496908 NRKQ7Z2Y5 1582 aa19.88■□□□□ 0.77
MECP2-211ENST00000496908 PRDM11Q9NQV5 511 aa19.88■□□□□ 0.77
MECP2-211ENST00000496908 CHRNA2Q15822 529 aa19.86■□□□□ 0.77
MECP2-211ENST00000496908 USP19O94966 1318 aa19.85■□□□□ 0.77
MECP2-211ENST00000496908 ZC3H6P61129 1189 aaKnown RBP19.85■□□□□ 0.77
MECP2-211ENST00000496908 FAM98CQ17RN3 349 aaKnown RBP19.85■□□□□ 0.77
MECP2-211ENST00000496908 CABP1Q9NZU7 370 aa19.85■□□□□ 0.77
MECP2-211ENST00000496908 SPATA31A5Q5VU36 1347 aa19.84■□□□□ 0.77
MECP2-211ENST00000496908 SPATA31A7Q8IWB4 1347 aa19.84■□□□□ 0.77
MECP2-211ENST00000496908 ABTB2Q8N961 1025 aa19.84■□□□□ 0.77
MECP2-211ENST00000496908 USP6P35125 1406 aa19.84■□□□□ 0.77
MECP2-211ENST00000496908 BLMP54132 1417 aaPredicted RBP19.83■□□□□ 0.76
MECP2-211ENST00000496908 EVC2Q86UK5 1308 aa19.82■□□□□ 0.76
MECP2-211ENST00000496908 THSD7AQ9UPZ6 1657 aa19.82■□□□□ 0.76
MECP2-211ENST00000496908 KRT27Q7Z3Y8 459 aa19.82■□□□□ 0.76
MECP2-211ENST00000496908 CCDC125Q86Z20 511 aa19.82■□□□□ 0.76
MECP2-211ENST00000496908 A0A0G2JS52 829 aa19.81■□□□□ 0.76
MECP2-211ENST00000496908 MYT1Q01538 1121 aa19.81■□□□□ 0.76
MECP2-211ENST00000496908 SSH2Q76I76 1423 aa19.81■□□□□ 0.76
MECP2-211ENST00000496908 LMO7Q8WWI1 1683 aa19.81■□□□□ 0.76
MECP2-211ENST00000496908 CAMTA1Q9Y6Y1 1673 aa19.8■□□□□ 0.76
MECP2-211ENST00000496908 BRD4O60885 1362 aaPredicted RBP19.8■□□□□ 0.76
MECP2-211ENST00000496908 CPDO75976 1380 aa19.8■□□□□ 0.76
MECP2-211ENST00000496908 PIK3C2AO00443 1686 aa19.79■□□□□ 0.76
MECP2-211ENST00000496908 STRN4Q9NRL3 753 aa19.79■□□□□ 0.76
MECP2-211ENST00000496908 SPATA31A1Q5TZJ5 1347 aa19.78■□□□□ 0.76
MECP2-211ENST00000496908 TRIM26Q12899 539 aaPredicted RBP19.78■□□□□ 0.76
MECP2-211ENST00000496908 NLRP13Q86W25 1043 aa19.78■□□□□ 0.76
MECP2-211ENST00000496908 TONSLQ96HA7 1378 aa19.78■□□□□ 0.76
MECP2-211ENST00000496908 AKAP12Q02952 1782 aa19.78■□□□□ 0.76
MECP2-211ENST00000496908 SLIT3O75094 1523 aa19.77■□□□□ 0.76
MECP2-211ENST00000496908 GCP02774 474 aa19.77■□□□□ 0.76
MECP2-211ENST00000496908 DEFB132Q7Z7B7 95 aa19.77■□□□□ 0.76
MECP2-211ENST00000496908 SBNO2Q9Y2G9 1366 aa19.76■□□□□ 0.75
MECP2-211ENST00000496908 CARD11Q9BXL7 1154 aa19.76■□□□□ 0.75
MECP2-211ENST00000496908 SRCAPQ6ZRS2 3230 aa19.76■□□□□ 0.75
MECP2-211ENST00000496908 FAM182BQ5T319 152 aa19.75■□□□□ 0.75
MECP2-211ENST00000496908 NLRP6P59044 892 aa19.73■□□□□ 0.75
MECP2-211ENST00000496908 LARP1Q6PKG0 1096 aaKnown RBP19.73■□□□□ 0.75
MECP2-211ENST00000496908 CPSF1Q10570 1443 aaKnown RBP19.73■□□□□ 0.75
MECP2-211ENST00000496908 USP35Q9P2H5 1018 aa19.72■□□□□ 0.75
MECP2-211ENST00000496908 COL5A2P05997 1499 aaPredicted RBP19.72■□□□□ 0.75
MECP2-211ENST00000496908 TTC21BQ7Z4L5 1316 aa19.72■□□□□ 0.75
MECP2-211ENST00000496908 EVA1CP58658 441 aa19.71■□□□□ 0.75
MECP2-211ENST00000496908 MON2Q7Z3U7 1717 aa19.71■□□□□ 0.75
MECP2-211ENST00000496908 SF3B2Q13435 895 aaKnown RBP19.7■□□□□ 0.74
MECP2-211ENST00000496908 ZRANB1Q9UGI0 708 aa19.7■□□□□ 0.74
MECP2-211ENST00000496908 COL18A1P39060 1754 aa19.7■□□□□ 0.74
MECP2-211ENST00000496908 CD163L1Q9NR16 1453 aa19.69■□□□□ 0.74
MECP2-211ENST00000496908 ZBTB7CA1YPR0 619 aa19.69■□□□□ 0.74
MECP2-211ENST00000496908 ZNF692Q9BU19 519 aaPredicted RBP19.69■□□□□ 0.74
MECP2-211ENST00000496908 RGPD1P0DJD0 1748 aa19.68■□□□□ 0.74
MECP2-211ENST00000496908 BARGINQ6ZT62 677 aa19.68■□□□□ 0.74
MECP2-211ENST00000496908 AATKQ6ZMQ8 1374 aa19.68■□□□□ 0.74
MECP2-211ENST00000496908 KTN1Q86UP2 1357 aaKnown RBP19.68■□□□□ 0.74
MECP2-211ENST00000496908 TNS1Q9HBL0 1735 aaKnown RBP19.68■□□□□ 0.74
MECP2-211ENST00000496908 TCP11L2Q8N4U5 519 aa19.66■□□□□ 0.74
MECP2-211ENST00000496908 TTC21AQ8NDW8 1320 aa19.66■□□□□ 0.74
MECP2-211ENST00000496908 NFAT5O94916 1531 aa19.66■□□□□ 0.74
MECP2-211ENST00000496908 CRB1P82279 1406 aa19.65■□□□□ 0.74
MECP2-211ENST00000496908 AXIN2Q9Y2T1 843 aa19.64■□□□□ 0.73
MECP2-211ENST00000496908 RGPD5Q99666 1765 aa19.63■□□□□ 0.73
MECP2-211ENST00000496908 PARP4Q9UKK3 1724 aaKnown RBP19.63■□□□□ 0.73
MECP2-211ENST00000496908 SOX12O15370 315 aa19.63■□□□□ 0.73
MECP2-211ENST00000496908 BAG6P46379 1132 aa19.63■□□□□ 0.73
MECP2-211ENST00000496908 ARHGEF25Q86VW2 580 aa19.63■□□□□ 0.73
MECP2-211ENST00000496908 TESK2Q96S53 571 aa19.63■□□□□ 0.73
MECP2-211ENST00000496908 USP54Q70EL1 1684 aa19.62■□□□□ 0.73
MECP2-211ENST00000496908 SLC12A5Q9H2X9 1139 aa19.62■□□□□ 0.73
MECP2-211ENST00000496908 DISP2A7MBM2 1401 aa19.61■□□□□ 0.73
MECP2-211ENST00000496908 EN1Q05925 392 aaPredicted RBP19.61■□□□□ 0.73
MECP2-211ENST00000496908 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.61■□□□□ 0.735e-7■■■■□ 20.4
MECP2-211ENST00000496908 TMC1Q8TDI8 760 aa19.61■□□□□ 0.73
MECP2-211ENST00000496908 THRAP3Q9Y2W1 955 aaKnown RBP19.61■□□□□ 0.73
MECP2-211ENST00000496908 ST20-MTHFSA0A0A6YYL1 179 aa19.6■□□□□ 0.73
MECP2-211ENST00000496908 FAM196AQ6ZSG2 479 aa19.6■□□□□ 0.73
MECP2-211ENST00000496908 NME9Q86XW9 330 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms