RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 ABCC11Q96J66 1382 aa17.77■□□□□ 0.43
ATG3-209ENST00000496423 LOC105371045A0A1W2PR82 267 aa17.76■□□□□ 0.43
ATG3-209ENST00000496423 RGPD8O14715 1765 aaPredicted RBP17.76■□□□□ 0.43
ATG3-209ENST00000496423 PPLO60437 1756 aa17.76■□□□□ 0.43
ATG3-209ENST00000496423 PRDM11Q9NQV5 511 aa17.75■□□□□ 0.43
ATG3-209ENST00000496423 NRXN1Q9ULB1 1477 aa17.75■□□□□ 0.43
ATG3-209ENST00000496423 SPATA31A1Q5TZJ5 1347 aa17.74■□□□□ 0.43
ATG3-209ENST00000496423 SIRT1Q96EB6 747 aa17.74■□□□□ 0.43
ATG3-209ENST00000496423 GIGYF1O75420 1035 aaPredicted RBP17.73■□□□□ 0.43
ATG3-209ENST00000496423 ITGAEP38570 1179 aa17.73■□□□□ 0.43
ATG3-209ENST00000496423 GPRASP1Q5JY77 1395 aa17.73■□□□□ 0.43
ATG3-209ENST00000496423 IFT172Q9UG01 1749 aa17.72■□□□□ 0.43
ATG3-209ENST00000496423 EVA1CP58658 441 aa17.71■□□□□ 0.43
ATG3-209ENST00000496423 PMFBP1Q8TBY8 1022 aa17.71■□□□□ 0.43
ATG3-209ENST00000496423 KNDC1Q76NI1 1749 aa17.71■□□□□ 0.43
ATG3-209ENST00000496423 PLEKHH1Q9ULM0 1364 aa17.7■□□□□ 0.42
ATG3-209ENST00000496423 STRN4Q9NRL3 753 aa17.7■□□□□ 0.42
ATG3-209ENST00000496423 TMEM132EQ6IEE7 984 aa17.69■□□□□ 0.42
ATG3-209ENST00000496423 BARGINQ6ZT62 677 aa17.69■□□□□ 0.42
ATG3-209ENST00000496423 USP35Q9P2H5 1018 aa17.68■□□□□ 0.42
ATG3-209ENST00000496423 SYT17Q9BSW7 474 aa17.67■□□□□ 0.42
ATG3-209ENST00000496423 NRKQ7Z2Y5 1582 aa17.66■□□□□ 0.42
ATG3-209ENST00000496423 PLSCR1O15162 318 aa17.66■□□□□ 0.42
ATG3-209ENST00000496423 ADGRF5Q8IZF2 1346 aa17.66■□□□□ 0.42
ATG3-209ENST00000496423 YTHDC2Q9H6S0 1430 aaKnown RBP17.65■□□□□ 0.42
ATG3-209ENST00000496423 PAK3O75914 559 aaPredicted RBP17.65■□□□□ 0.42
ATG3-209ENST00000496423 BCL11BQ9C0K0 894 aaPredicted RBP17.65■□□□□ 0.42
ATG3-209ENST00000496423 ANKRD30BQ9BXX2 1392 aa17.65■□□□□ 0.42
ATG3-209ENST00000496423 ZBTB7AO95365 584 aa17.64■□□□□ 0.41
ATG3-209ENST00000496423 FHDC1Q9C0D6 1143 aaPredicted RBP17.64■□□□□ 0.41
ATG3-209ENST00000496423 ANKARQ7Z5J8 1434 aa17.64■□□□□ 0.41
ATG3-209ENST00000496423 ATF5Q9Y2D1 282 aaPredicted RBP17.63■□□□□ 0.41
ATG3-209ENST00000496423 ALS2Q96Q42 1657 aa17.63■□□□□ 0.41
ATG3-209ENST00000496423 TCP11L2Q8N4U5 519 aa17.62■□□□□ 0.41
ATG3-209ENST00000496423 THRAP3Q9Y2W1 955 aaKnown RBP17.62■□□□□ 0.41
ATG3-209ENST00000496423 DHX57Q6P158 1386 aaKnown RBP17.62■□□□□ 0.41
ATG3-209ENST00000496423 TRPM3Q9HCF6 1732 aaPredicted RBP17.61■□□□□ 0.41
ATG3-209ENST00000496423 RGL3Q3MIN7 710 aa17.61■□□□□ 0.41
ATG3-209ENST00000496423 NGDNQ8NEJ9 315 aaKnown RBP17.61■□□□□ 0.41
ATG3-209ENST00000496423 POGKQ9P215 609 aa17.61■□□□□ 0.41
ATG3-209ENST00000496423 RGPD3A6NKT7 1758 aaPredicted RBP17.61■□□□□ 0.41
ATG3-209ENST00000496423 RGPD4Q7Z3J3 1758 aa17.61■□□□□ 0.41
ATG3-209ENST00000496423 CASZ1Q86V15 1759 aa17.61■□□□□ 0.41
ATG3-209ENST00000496423 PTGER2P43116 358 aa17.6■□□□□ 0.41
ATG3-209ENST00000496423 CHRNA2Q15822 529 aa17.6■□□□□ 0.41
ATG3-209ENST00000496423 GPR162Q16538 588 aa17.6■□□□□ 0.41
ATG3-209ENST00000496423 STK32BQ9NY57 414 aa17.6■□□□□ 0.41
ATG3-209ENST00000496423 ACIN1Q9UKV3 1341 aaKnown RBP17.6■□□□□ 0.41
ATG3-209ENST00000496423 EIF3AQ14152 1382 aaKnown RBP17.6■□□□□ 0.41
ATG3-209ENST00000496423 KIAA0232Q92628 1395 aa17.6■□□□□ 0.41
ATG3-209ENST00000496423 MYOM1P52179 1685 aa17.6■□□□□ 0.41
ATG3-209ENST00000496423 SAFB2Q14151 953 aaKnown RBP eCLIP17.59■□□□□ 0.41
ATG3-209ENST00000496423 SLC4A1APQ9BWU0 796 aaKnown RBP17.59■□□□□ 0.41
ATG3-209ENST00000496423 DLC1Q96QB1 1528 aa17.58■□□□□ 0.41
ATG3-209ENST00000496423 PRAM1Q96QH2 718 aa17.58■□□□□ 0.4
ATG3-209ENST00000496423 MTFR1LQ9H019 292 aa17.58■□□□□ 0.4
ATG3-209ENST00000496423 ZC3H6P61129 1189 aaKnown RBP17.57■□□□□ 0.4
ATG3-209ENST00000496423 MAPK8IP2Q13387 824 aaPredicted RBP17.56■□□□□ 0.4
ATG3-209ENST00000496423 OVOS2A0A0G2JMS6 1433 aa17.55■□□□□ 0.4
ATG3-209ENST00000496423 OVOS2A0A0J9YW53 1432 aa17.55■□□□□ 0.4
ATG3-209ENST00000496423 OVOS2Q6IE36 1432 aa17.55■□□□□ 0.4
ATG3-209ENST00000496423 SSH2Q76I76 1423 aa17.55■□□□□ 0.4
ATG3-209ENST00000496423 ARXQ96QS3 562 aa17.55■□□□□ 0.4
ATG3-209ENST00000496423 ANO8Q9HCE9 1232 aaPredicted RBP17.55■□□□□ 0.4
ATG3-209ENST00000496423 CRYBG1Q9Y4K1 1723 aa17.55■□□□□ 0.4
ATG3-209ENST00000496423 PIK3C2GO75747 1445 aa17.54■□□□□ 0.4
ATG3-209ENST00000496423 SLC15A2Q16348 729 aa17.53■□□□□ 0.4
ATG3-209ENST00000496423 NCBP3Q53F19 620 aaKnown RBP17.53■□□□□ 0.4
ATG3-209ENST00000496423 LARP1Q6PKG0 1096 aaKnown RBP17.53■□□□□ 0.4
ATG3-209ENST00000496423 PDGFDQ9GZP0 370 aaPredicted RBP17.53■□□□□ 0.4
ATG3-209ENST00000496423 C14orf93Q9H972 538 aaKnown RBP17.53■□□□□ 0.4
ATG3-209ENST00000496423 PARP4Q9UKK3 1724 aaKnown RBP17.51■□□□□ 0.39
ATG3-209ENST00000496423 DDB1Q16531 1140 aa17.5■□□□□ 0.39
ATG3-209ENST00000496423 MAP3K5Q99683 1374 aa17.5■□□□□ 0.39
ATG3-209ENST00000496423 SBF2Q86WG5 1849 aa17.49■□□□□ 0.39
ATG3-209ENST00000496423 PHRF1Q9P1Y6 1649 aaKnown RBP17.48■□□□□ 0.39
ATG3-209ENST00000496423 PELP1Q8IZL8 1130 aaKnown RBP17.48■□□□□ 0.39
ATG3-209ENST00000496423 TXNRD1Q16881 649 aa17.47■□□□□ 0.39
ATG3-209ENST00000496423 PROM2Q8N271 834 aa17.47■□□□□ 0.39
ATG3-209ENST00000496423 HIRIP3Q9BW71 556 aaPredicted RBP17.47■□□□□ 0.39
ATG3-209ENST00000496423 ATP7BP35670 1465 aa17.47■□□□□ 0.39
ATG3-209ENST00000496423 WASLO00401 505 aaPredicted RBP17.46■□□□□ 0.39
ATG3-209ENST00000496423 CFAP70Q5T0N1 1121 aa17.46■□□□□ 0.39
ATG3-209ENST00000496423 SGIP1Q9BQI5 828 aa17.46■□□□□ 0.39
ATG3-209ENST00000496423 TULP4Q9NRJ4 1543 aa17.46■□□□□ 0.39
ATG3-209ENST00000496423 HSPA6P17066 643 aa17.45■□□□□ 0.38
ATG3-209ENST00000496423 NUTM2GQ5VZR2 741 aa17.45■□□□□ 0.38
ATG3-209ENST00000496423 SPATA31E1Q6ZUB1 1445 aa17.45■□□□□ 0.38
ATG3-209ENST00000496423 GRIN3BO60391 1043 aa17.44■□□□□ 0.38
ATG3-209ENST00000496423 UTRNP46939 3433 aa17.44■□□□□ 0.38
ATG3-209ENST00000496423 MINK1Q8N4C8 1332 aaPredicted RBP17.44■□□□□ 0.38
ATG3-209ENST00000496423 CEP350Q5VT06 3117 aa17.43■□□□□ 0.38
ATG3-209ENST00000496423 CPDO75976 1380 aa17.43■□□□□ 0.38
ATG3-209ENST00000496423 NPM3O75607 178 aaKnown RBP17.43■□□□□ 0.38
ATG3-209ENST00000496423 POLD1P28340 1107 aa17.43■□□□□ 0.38
ATG3-209ENST00000496423 KLHL34Q8N239 644 aa17.43■□□□□ 0.38
ATG3-209ENST00000496423 CNKSR2Q8WXI2 1034 aa17.43■□□□□ 0.38
ATG3-209ENST00000496423 CDCA7Q9BWT1 371 aaPredicted RBP17.43■□□□□ 0.38
ATG3-209ENST00000496423 CRB1P82279 1406 aa17.43■□□□□ 0.38
ATG3-209ENST00000496423 PEAK1Q9H792 1746 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms