RNA–Protein interactions for RNA: ENST00000496358.1

COPS6-210, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 2

Gene COPS6, Length 610 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-210ENST00000496358 ST20-MTHFSA0A0A6YYL1 179 aa25.88■■□□□ 1.73
COPS6-210ENST00000496358 ATAD2Q6PL18 1390 aa25.86■■□□□ 1.73
COPS6-210ENST00000496358 USP21Q9UK80 565 aa25.85■■□□□ 1.73
COPS6-210ENST00000496358 USP47Q96K76 1375 aa25.84■■□□□ 1.73
COPS6-210ENST00000496358 FNBP4Q8N3X1 1017 aaPredicted RBP25.84■■□□□ 1.73
COPS6-210ENST00000496358 QTRT2Q9H974 415 aaKnown RBP25.84■■□□□ 1.73
COPS6-210ENST00000496358 SLC24A1O60721 1099 aa25.82■■□□□ 1.72
COPS6-210ENST00000496358 RXRBP28702 533 aa25.82■■□□□ 1.72
COPS6-210ENST00000496358 TESK2Q96S53 571 aa25.82■■□□□ 1.72
COPS6-210ENST00000496358 NUTM2GQ5VZR2 741 aa25.81■■□□□ 1.72
COPS6-210ENST00000496358 ABTB2Q8N961 1025 aa25.81■■□□□ 1.72
COPS6-210ENST00000496358 BRD4O60885 1362 aaPredicted RBP25.81■■□□□ 1.72
COPS6-210ENST00000496358 CRYBG1Q9Y4K1 1723 aa25.8■■□□□ 1.72
COPS6-210ENST00000496358 USP6P35125 1406 aa25.8■■□□□ 1.72
COPS6-210ENST00000496358 AKAP12Q02952 1782 aa25.79■■□□□ 1.72
COPS6-210ENST00000496358 ZNF692Q9BU19 519 aaPredicted RBP25.79■■□□□ 1.72
COPS6-210ENST00000496358 TMC1Q8TDI8 760 aa25.78■■□□□ 1.72
COPS6-210ENST00000496358 TRPC5Q9UL62 973 aaPredicted RBP25.78■■□□□ 1.72
COPS6-210ENST00000496358 PUS7Q96PZ0 661 aaKnown RBP25.77■■□□□ 1.72
COPS6-210ENST00000496358 RBM6P78332 1123 aaKnown RBP25.76■■□□□ 1.71
COPS6-210ENST00000496358 BCL9LQ86UU0 1499 aa25.76■■□□□ 1.71
COPS6-210ENST00000496358 PLCH1Q4KWH8 1693 aa25.75■■□□□ 1.71
COPS6-210ENST00000496358 PHRF1Q9P1Y6 1649 aaKnown RBP25.75■■□□□ 1.71
COPS6-210ENST00000496358 SLIT2O94813 1529 aa25.75■■□□□ 1.71
COPS6-210ENST00000496358 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.74■■□□□ 1.71
COPS6-210ENST00000496358 FAM83GA6ND36 823 aa25.74■■□□□ 1.71
COPS6-210ENST00000496358 NLRP13Q86W25 1043 aa25.74■■□□□ 1.71
COPS6-210ENST00000496358 CPSF1Q10570 1443 aaKnown RBP25.73■■□□□ 1.71
COPS6-210ENST00000496358 KTN1Q86UP2 1357 aaKnown RBP25.73■■□□□ 1.71
COPS6-210ENST00000496358 TMF1P82094 1093 aa25.73■■□□□ 1.71
COPS6-210ENST00000496358 UNC5CLQ8IV45 518 aa25.73■■□□□ 1.71
COPS6-210ENST00000496358 NWD2Q9ULI1 1742 aa25.73■■□□□ 1.71
COPS6-210ENST00000496358 ATRNO75882 1429 aa25.72■■□□□ 1.71
COPS6-210ENST00000496358 UPF1Q92900 1129 aaKnown RBP eCLIP25.72■■□□□ 1.71
COPS6-210ENST00000496358 SLC12A5Q9H2X9 1139 aa25.72■■□□□ 1.71
COPS6-210ENST00000496358 SSH2Q76I76 1423 aa25.71■■□□□ 1.71
COPS6-210ENST00000496358 COL14A1Q05707 1796 aaKnown RBP25.71■■□□□ 1.71
COPS6-210ENST00000496358 MON2Q7Z3U7 1717 aa25.71■■□□□ 1.71
COPS6-210ENST00000496358 TTC21BQ7Z4L5 1316 aa25.7■■□□□ 1.71
COPS6-210ENST00000496358 NLRP6P59044 892 aa25.7■■□□□ 1.7
COPS6-210ENST00000496358 HDGFL2Q7Z4V5 671 aaPredicted RBP25.7■■□□□ 1.7
COPS6-210ENST00000496358 CDK12Q9NYV4 1490 aaPredicted RBP25.69■■□□□ 1.7
COPS6-210ENST00000496358 PRDM11Q9NQV5 511 aa25.69■■□□□ 1.7
COPS6-210ENST00000496358 ZC3H6P61129 1189 aaKnown RBP25.68■■□□□ 1.7
COPS6-210ENST00000496358 TERF2IPQ9NYB0 399 aa25.68■■□□□ 1.7
COPS6-210ENST00000496358 PIK3C2AO00443 1686 aa25.68■■□□□ 1.7
COPS6-210ENST00000496358 USP19O94966 1318 aa25.67■■□□□ 1.7
COPS6-210ENST00000496358 TTC21AQ8NDW8 1320 aa25.67■■□□□ 1.7
COPS6-210ENST00000496358 CD163L1Q9NR16 1453 aa25.67■■□□□ 1.7
COPS6-210ENST00000496358 NRKQ7Z2Y5 1582 aa25.67■■□□□ 1.7
COPS6-210ENST00000496358 BTG4Q9NY30 223 aa25.67■■□□□ 1.7
COPS6-210ENST00000496358 KIAA0232Q92628 1395 aa25.67■■□□□ 1.7
COPS6-210ENST00000496358 CDCA8Q53HL2 280 aa25.66■■□□□ 1.7
COPS6-210ENST00000496358 GJD4Q96KN9 370 aaPredicted RBP25.66■■□□□ 1.7
COPS6-210ENST00000496358 NINLQ9Y2I6 1382 aa25.66■■□□□ 1.7
COPS6-210ENST00000496358 GCP02774 474 aa25.65■■□□□ 1.7
COPS6-210ENST00000496358 EIF4G2P78344 907 aaKnown RBP eCLIP25.64■■□□□ 1.7
COPS6-210ENST00000496358 CHRNA2Q15822 529 aa25.64■■□□□ 1.7
COPS6-210ENST00000496358 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.64■■□□□ 1.7
COPS6-210ENST00000496358 RGS12O14924 1447 aa25.63■■□□□ 1.69
COPS6-210ENST00000496358 VPS72Q15906 364 aa25.63■■□□□ 1.69
COPS6-210ENST00000496358 CCDC9Q9Y3X0 531 aaKnown RBP25.63■■□□□ 1.69
COPS6-210ENST00000496358 NRAPQ86VF7 1730 aa25.63■■□□□ 1.69
COPS6-210ENST00000496358 A0A1W2PP64 1363 aa25.62■■□□□ 1.69
COPS6-210ENST00000496358 SLIT3O75094 1523 aa25.6■■□□□ 1.69
COPS6-210ENST00000496358 EDC4Q6P2E9 1401 aaKnown RBP25.6■■□□□ 1.69
COPS6-210ENST00000496358 CPDO75976 1380 aa25.59■■□□□ 1.69
COPS6-210ENST00000496358 HSPA5P11021 654 aaKnown RBP25.59■■□□□ 1.69
COPS6-210ENST00000496358 GLI3P10071 1580 aa25.59■■□□□ 1.69
COPS6-210ENST00000496358 ZBTB7CA1YPR0 619 aa25.57■■□□□ 1.68
COPS6-210ENST00000496358 NME9Q86XW9 330 aa25.56■■□□□ 1.68
COPS6-210ENST00000496358 KCNH5Q8NCM2 988 aa25.56■■□□□ 1.68
COPS6-210ENST00000496358 SRCAPQ6ZRS2 3230 aa25.55■■□□□ 1.68
COPS6-210ENST00000496358 SOX12O15370 315 aa25.55■■□□□ 1.68
COPS6-210ENST00000496358 STRN4Q9NRL3 753 aa25.55■■□□□ 1.68
COPS6-210ENST00000496358 ZRANB1Q9UGI0 708 aa25.55■■□□□ 1.68
COPS6-210ENST00000496358 ANKRD36BQ8N2N9 1353 aa25.55■■□□□ 1.68
COPS6-210ENST00000496358 EVA1CP58658 441 aa25.54■■□□□ 1.68
COPS6-210ENST00000496358 USP31Q70CQ4 1352 aa25.54■■□□□ 1.68
COPS6-210ENST00000496358 USP54Q70EL1 1684 aa25.52■■□□□ 1.68
COPS6-210ENST00000496358 LMO7Q8WWI1 1683 aa25.52■■□□□ 1.68
COPS6-210ENST00000496358 POLR3GLQ9BT43 218 aa25.52■■□□□ 1.68
COPS6-210ENST00000496358 CAMTA1Q9Y6Y1 1673 aa25.52■■□□□ 1.68
COPS6-210ENST00000496358 MYOM1P52179 1685 aa25.5■■□□□ 1.67
COPS6-210ENST00000496358 SPATA31A5Q5VU36 1347 aa25.5■■□□□ 1.67
COPS6-210ENST00000496358 SPATA31A7Q8IWB4 1347 aa25.5■■□□□ 1.67
COPS6-210ENST00000496358 AATKQ6ZMQ8 1374 aa25.48■■□□□ 1.67
COPS6-210ENST00000496358 SEPT12Q8IYM1 358 aa25.48■■□□□ 1.67
COPS6-210ENST00000496358 BRWD3Q6RI45 1802 aa25.47■■□□□ 1.67
COPS6-210ENST00000496358 A0A0G2JS52 829 aa25.47■■□□□ 1.67
COPS6-210ENST00000496358 ONECUT3O60422 494 aaPredicted RBP25.47■■□□□ 1.67
COPS6-210ENST00000496358 MYT1Q01538 1121 aa25.47■■□□□ 1.67
COPS6-210ENST00000496358 FAM98CQ17RN3 349 aaKnown RBP25.47■■□□□ 1.67
COPS6-210ENST00000496358 ARHGEF25Q86VW2 580 aa25.47■■□□□ 1.67
COPS6-210ENST00000496358 NFAT5O94916 1531 aa25.47■■□□□ 1.67
COPS6-210ENST00000496358 COL18A1P39060 1754 aa25.46■■□□□ 1.67
COPS6-210ENST00000496358 SPATA31A1Q5TZJ5 1347 aa25.45■■□□□ 1.66
COPS6-210ENST00000496358 RGPD5Q99666 1765 aa25.45■■□□□ 1.66
COPS6-210ENST00000496358 LARP1Q6PKG0 1096 aaKnown RBP25.44■■□□□ 1.66
COPS6-210ENST00000496358 COG3Q96JB2 828 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms