RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, human

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-223	ENST00000496296	MON2	Q7Z3U7	1717 aa		28.03	■■■□□ 2.08
FGFR1-223	ENST00000496296	CFAP53	Q96M91	514 aa		28.03	■■■□□ 2.08
FGFR1-223	ENST00000496296	ACE	P12821	1306 aa		28.02	■■■□□ 2.08
FGFR1-223	ENST00000496296	MTHFS	P49914	203 aa		28.01	■■■□□ 2.07
FGFR1-223	ENST00000496296	ADAMTS8	Q9UP79	889 aa		28.01	■■■□□ 2.07
FGFR1-223	ENST00000496296	CERK	Q8TCT0	537 aa		28	■■■□□ 2.07
FGFR1-223	ENST00000496296	ADGRL3	Q9HAR2	1447 aa		27.99	■■■□□ 2.07
FGFR1-223	ENST00000496296	FMN2	Q9NZ56	1722 aa		27.99	■■■□□ 2.07
FGFR1-223	ENST00000496296	NALCN	Q8IZF0	1738 aa		27.99	■■■□□ 2.07
FGFR1-223	ENST00000496296	C14orf37	Q86TY3	774 aa		27.98	■■■□□ 2.07
FGFR1-223	ENST00000496296	LTBP4	Q8N2S1	1624 aa		27.97	■■■□□ 2.07
FGFR1-223	ENST00000496296	NKTR	P30414	1462 aa	Known RBP	27.97	■■■□□ 2.07
FGFR1-223	ENST00000496296	NGDN	Q8NEJ9	315 aa	Known RBP	27.95	■■■□□ 2.07
FGFR1-223	ENST00000496296	USP6	P35125	1406 aa		27.95	■■■□□ 2.07
FGFR1-223	ENST00000496296	PROSER2	Q86WR7	435 aa	Predicted RBP	27.95	■■■□□ 2.06
FGFR1-223	ENST00000496296	NME9	Q86XW9	330 aa		27.94	■■■□□ 2.06
FGFR1-223	ENST00000496296	PMFBP1	Q8TBY8	1022 aa		27.94	■■■□□ 2.06
FGFR1-223	ENST00000496296	COG3	Q96JB2	828 aa		27.94	■■■□□ 2.06
FGFR1-223	ENST00000496296	RBM33	Q96EV2	1170 aa	Known RBP	27.93	■■■□□ 2.06
FGFR1-223	ENST00000496296	TTC21B	Q7Z4L5	1316 aa		27.92	■■■□□ 2.06
FGFR1-223	ENST00000496296	RGPD8	O14715	1765 aa	Predicted RBP	27.91	■■■□□ 2.06
FGFR1-223	ENST00000496296	NRK	Q7Z2Y5	1582 aa		27.9	■■■□□ 2.06
FGFR1-223	ENST00000496296	TTC21A	Q8NDW8	1320 aa		27.89	■■■□□ 2.05
FGFR1-223	ENST00000496296	ILDR1	Q86SU0	546 aa	Predicted RBP	27.89	■■■□□ 2.05
FGFR1-223	ENST00000496296	RCAN3	Q9UKA8	241 aa		27.88	■■■□□ 2.05
FGFR1-223	ENST00000496296	RRP1	P56182	461 aa	Known RBP	27.87	■■■□□ 2.05
FGFR1-223	ENST00000496296	SENP3-EIF4A1	A0A087X0R7	540 aa		27.87	■■■□□ 2.05
FGFR1-223	ENST00000496296	ZNF521	Q96K83	1311 aa		27.86	■■■□□ 2.05
FGFR1-223	ENST00000496296	STRCP1	A6NGW2	1772 aa		27.86	■■■□□ 2.05
FGFR1-223	ENST00000496296	SSH2	Q76I76	1423 aa		27.85	■■■□□ 2.05
FGFR1-223	ENST00000496296	SHPRH	Q149N8	1683 aa		27.85	■■■□□ 2.05
FGFR1-223	ENST00000496296	PHF8	Q9UPP1	1060 aa		27.85	■■■□□ 2.05
FGFR1-223	ENST00000496296	AATK	Q6ZMQ8	1374 aa		27.84	■■■□□ 2.05
FGFR1-223	ENST00000496296	B4GALNT3	Q6L9W6	998 aa		27.84	■■■□□ 2.05
FGFR1-223	ENST00000496296	FBXO41	Q8TF61	875 aa		27.83	■■■□□ 2.05
FGFR1-223	ENST00000496296	C19orf44	Q9H6X5	657 aa		27.83	■■■□□ 2.05
FGFR1-223	ENST00000496296	ZRANB1	Q9UGI0	708 aa		27.83	■■■□□ 2.05
FGFR1-223	ENST00000496296	SALL2	Q9Y467	1007 aa	Predicted RBP	27.83	■■■□□ 2.05
FGFR1-223	ENST00000496296	RBM19	Q9Y4C8	960 aa	Known RBP	27.83	■■■□□ 2.05
FGFR1-223	ENST00000496296	NCOA3	Q9Y6Q9	1424 aa		27.83	■■■□□ 2.05
FGFR1-223	ENST00000496296	CDCA7L	Q96GN5	454 aa		27.81	■■■□□ 2.04
FGFR1-223	ENST00000496296	POLK	Q9UBT6	870 aa		27.81	■■■□□ 2.04
FGFR1-223	ENST00000496296	ESCO1	Q5FWF5	840 aa		27.81	■■■□□ 2.04
FGFR1-223	ENST00000496296	NGEF	Q8N5V2	710 aa		27.81	■■■□□ 2.04
FGFR1-223	ENST00000496296	PNPLA6	Q8IY17	1366 aa		27.8	■■■□□ 2.04
FGFR1-223	ENST00000496296	CCDC146	Q8IYE0	955 aa		27.8	■■■□□ 2.04
FGFR1-223	ENST00000496296	TMEM94	Q12767	1356 aa		27.79	■■■□□ 2.04
FGFR1-223	ENST00000496296	OVOS2	A0A0J9YW53	1432 aa		27.79	■■■□□ 2.04
FGFR1-223	ENST00000496296	OVOS2	Q6IE36	1432 aa		27.79	■■■□□ 2.04
FGFR1-223	ENST00000496296	PPM1G	O15355	546 aa	Predicted RBP	27.78	■■■□□ 2.04
FGFR1-223	ENST00000496296	COL3A1	P02461	1466 aa	Predicted RBP	27.78	■■■□□ 2.04
FGFR1-223	ENST00000496296	DIAPH1	O60610	1272 aa	Known RBP	27.78	■■■□□ 2.04
FGFR1-223	ENST00000496296	U2AF1L5	P0DN76	240 aa	Predicted RBP	27.77	■■■□□ 2.04
FGFR1-223	ENST00000496296	U2AF1	Q01081	240 aa	Known RBP eCLIP	27.77	■■■□□ 2.04
FGFR1-223	ENST00000496296	MAP2	P11137	1827 aa	Known RBP	27.75	■■■□□ 2.03
FGFR1-223	ENST00000496296	ATF3	P18847	181 aa		27.75	■■■□□ 2.03
FGFR1-223	ENST00000496296	RUNDC1	Q96C34	613 aa		27.75	■■■□□ 2.03
FGFR1-223	ENST00000496296	FBLN1	P23142	703 aa		27.74	■■■□□ 2.03
FGFR1-223	ENST00000496296	USP31	Q70CQ4	1352 aa		27.74	■■■□□ 2.03
FGFR1-223	ENST00000496296	DCC	P43146	1447 aa		27.74	■■■□□ 2.03
FGFR1-223	ENST00000496296	APAF1	O14727	1248 aa		27.74	■■■□□ 2.03
FGFR1-223	ENST00000496296	U2SURP	O15042	1029 aa	Known RBP	27.74	■■■□□ 2.03
FGFR1-223	ENST00000496296	CDK12	Q9NYV4	1490 aa	Predicted RBP	27.73	■■■□□ 2.03
FGFR1-223	ENST00000496296	EMILIN1	Q9Y6C2	1016 aa		27.73	■■■□□ 2.03
FGFR1-223	ENST00000496296	PSME1	Q06323	249 aa		27.72	■■■□□ 2.03
FGFR1-223	ENST00000496296	PAK3	O75914	559 aa	Predicted RBP	27.71	■■■□□ 2.03
FGFR1-223	ENST00000496296	CCDC136	Q96JN2	1154 aa		27.71	■■■□□ 2.03
FGFR1-223	ENST00000496296	IQSEC2	Q5JU85	1478 aa		27.71	■■■□□ 2.03
FGFR1-223	ENST00000496296	RRS1	Q15050	365 aa	Known RBP	27.7	■■■□□ 2.03
FGFR1-223	ENST00000496296	TRMT2A	Q8IZ69	625 aa	Known RBP	27.7	■■■□□ 2.03
FGFR1-223	ENST00000496296	PNN	Q9H307	717 aa	Known RBP	27.7	■■■□□ 2.03
FGFR1-223	ENST00000496296	DUSP27	Q5VZP5	1158 aa		27.7	■■■□□ 2.02
FGFR1-223	ENST00000496296	LRRC7	Q96NW7	1537 aa		27.69	■■■□□ 2.02
FGFR1-223	ENST00000496296	NLRP6	P59044	892 aa		27.69	■■■□□ 2.02
FGFR1-223	ENST00000496296	ABTB2	Q8N961	1025 aa		27.69	■■■□□ 2.02
FGFR1-223	ENST00000496296	C1orf167	Q5SNV9	1468 aa		27.69	■■■□□ 2.02
FGFR1-223	ENST00000496296	GOLGA2	Q08379	1002 aa		27.68	■■■□□ 2.02
FGFR1-223	ENST00000496296	CADPS2	Q86UW7	1296 aa		27.68	■■■□□ 2.02
FGFR1-223	ENST00000496296	ORAI2	Q96SN7	254 aa		27.68	■■■□□ 2.02
FGFR1-223	ENST00000496296	PIK3C2A	O00443	1686 aa		27.68	■■■□□ 2.02
FGFR1-223	ENST00000496296	MSH6	P52701	1360 aa		27.68	■■■□□ 2.02
FGFR1-223	ENST00000496296	KIF1A	Q12756	1690 aa		27.66	■■■□□ 2.02
FGFR1-223	ENST00000496296	SLFN5	Q08AF3	891 aa		27.66	■■■□□ 2.02
FGFR1-223	ENST00000496296	XIRP1	Q702N8	1843 aa	Known RBP	27.65	■■■□□ 2.02
FGFR1-223	ENST00000496296	UBAP1L	F5GYI3	381 aa		27.64	■■■□□ 2.01
FGFR1-223	ENST00000496296	TCP11L2	Q8N4U5	519 aa		27.64	■■■□□ 2.01
FGFR1-223	ENST00000496296	MST1R	Q04912	1400 aa		27.63	■■■□□ 2.01
FGFR1-223	ENST00000496296	FOXO3	O43524	673 aa		27.62	■■■□□ 2.01
FGFR1-223	ENST00000496296	USP54	Q70EL1	1684 aa		27.62	■■■□□ 2.01
FGFR1-223	ENST00000496296	SOX12	O15370	315 aa		27.61	■■■□□ 2.01
FGFR1-223	ENST00000496296	FCHSD2	O94868	740 aa		27.61	■■■□□ 2.01
FGFR1-223	ENST00000496296	IL13	P35225	146 aa		27.61	■■■□□ 2.01
FGFR1-223	ENST00000496296	NCBP3	Q53F19	620 aa	Known RBP	27.61	■■■□□ 2.01
FGFR1-223	ENST00000496296	EXOC6	Q8TAG9	804 aa		27.61	■■■□□ 2.01
FGFR1-223	ENST00000496296	FANCI	Q9NVI1	1328 aa		27.61	■■■□□ 2.01
FGFR1-223	ENST00000496296	MAPK8IP3	Q9UPT6	1336 aa		27.61	■■■□□ 2.01
FGFR1-223	ENST00000496296	NEFM	P07197	916 aa		27.59	■■■□□ 2.01
FGFR1-223	ENST00000496296	NUTM2G	Q5VZR2	741 aa		27.59	■■■□□ 2.01
FGFR1-223	ENST00000496296	PLEKHF1	Q96S99	279 aa		27.58	■■■□□ 2.01
FGFR1-223	ENST00000496296	MAP3K19	Q56UN5	1328 aa		27.57	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms