RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 NWD2Q9ULI1 1742 aa15.79■□□□□ 0.12
RNF220-217ENST00000496262 NUTM2GQ5VZR2 741 aa15.78■□□□□ 0.12
RNF220-217ENST00000496262 ZRANB1Q9UGI0 708 aa15.78■□□□□ 0.12
RNF220-217ENST00000496262 FAM98CQ17RN3 349 aaKnown RBP15.77■□□□□ 0.12
RNF220-217ENST00000496262 NBPF1Q3BBV0 1214 aa15.77■□□□□ 0.12
RNF220-217ENST00000496262 BRWD3Q6RI45 1802 aa15.77■□□□□ 0.11
RNF220-217ENST00000496262 SRCAPQ6ZRS2 3230 aa15.77■□□□□ 0.11
RNF220-217ENST00000496262 ITSN1Q15811 1721 aa15.77■□□□□ 0.11
RNF220-217ENST00000496262 BLMP54132 1417 aaPredicted RBP15.77■□□□□ 0.11
RNF220-217ENST00000496262 KRT27Q7Z3Y8 459 aa15.76■□□□□ 0.11
RNF220-217ENST00000496262 PRDM11Q9NQV5 511 aa15.76■□□□□ 0.11
RNF220-217ENST00000496262 NRAPQ86VF7 1730 aa15.76■□□□□ 0.11
RNF220-217ENST00000496262 COL14A1Q05707 1796 aaKnown RBP15.75■□□□□ 0.11
RNF220-217ENST00000496262 SF3B2Q13435 895 aaKnown RBP15.75■□□□□ 0.11
RNF220-217ENST00000496262 DEFB132Q7Z7B7 95 aa15.75■□□□□ 0.11
RNF220-217ENST00000496262 ACEP12821 1306 aa15.73■□□□□ 0.11
RNF220-217ENST00000496262 SRPK2P78362 688 aaKnown RBP15.73■□□□□ 0.11
RNF220-217ENST00000496262 CHRNA2Q15822 529 aa15.73■□□□□ 0.11
RNF220-217ENST00000496262 KIAA1210Q9ULL0 1709 aa15.73■□□□□ 0.11
RNF220-217ENST00000496262 CRYBG1Q9Y4K1 1723 aa15.73■□□□□ 0.11
RNF220-217ENST00000496262 KIAA0232Q92628 1395 aa15.73■□□□□ 0.11
RNF220-217ENST00000496262 ONECUT3O60422 494 aaPredicted RBP15.72■□□□□ 0.11
RNF220-217ENST00000496262 ZC3H6P61129 1189 aaKnown RBP15.72■□□□□ 0.11
RNF220-217ENST00000496262 STRN4Q9NRL3 753 aa15.72■□□□□ 0.11
RNF220-217ENST00000496262 TOPAZ1Q8N9V7 1692 aa15.71■□□□□ 0.11
RNF220-217ENST00000496262 FAM182BQ5T319 152 aa15.71■□□□□ 0.11
RNF220-217ENST00000496262 CCDC61Q9Y6R9 512 aa15.71■□□□□ 0.11
RNF220-217ENST00000496262 CENPJQ9HC77 1338 aaPredicted RBP15.7■□□□□ 0.1
RNF220-217ENST00000496262 ZEB1P37275 1124 aaPredicted RBP15.7■□□□□ 0.1
RNF220-217ENST00000496262 NBPF8Q3BBV2 869 aa15.7■□□□□ 0.1
RNF220-217ENST00000496262 CABP2Q9NPB3 220 aa15.7■□□□□ 0.1
RNF220-217ENST00000496262 POLR3AO14802 1390 aaPredicted RBP15.7■□□□□ 0.1
RNF220-217ENST00000496262 SPATA31A5Q5VU36 1347 aa15.69■□□□□ 0.1
RNF220-217ENST00000496262 SPATA31A7Q8IWB4 1347 aa15.69■□□□□ 0.1
RNF220-217ENST00000496262 PHRF1Q9P1Y6 1649 aaKnown RBP15.69■□□□□ 0.1
RNF220-217ENST00000496262 ABTB2Q8N961 1025 aa15.69■□□□□ 0.1
RNF220-217ENST00000496262 PPIP5K1Q6PFW1 1433 aa15.68■□□□□ 0.1
RNF220-217ENST00000496262 NEUROD1Q13562 356 aa15.68■□□□□ 0.1
RNF220-217ENST00000496262 L3MBTL2Q969R5 705 aa15.68■□□□□ 0.1
RNF220-217ENST00000496262 SIN3AQ96ST3 1273 aa15.68■□□□□ 0.1
RNF220-217ENST00000496262 USP35Q9P2H5 1018 aa15.68■□□□□ 0.1
RNF220-217ENST00000496262 PLEKHG3A1L390 1219 aa15.67■□□□□ 0.1
RNF220-217ENST00000496262 ZBTB7CA1YPR0 619 aa15.66■□□□□ 0.1
RNF220-217ENST00000496262 QRICH2Q9H0J4 1663 aa15.66■□□□□ 0.1
RNF220-217ENST00000496262 NRKQ7Z2Y5 1582 aa15.66■□□□□ 0.1
RNF220-217ENST00000496262 SPATA31A1Q5TZJ5 1347 aa15.66■□□□□ 0.1
RNF220-217ENST00000496262 BAG6P46379 1132 aa15.65■□□□□ 0.1
RNF220-217ENST00000496262 EVA1CP58658 441 aa15.65■□□□□ 0.1
RNF220-217ENST00000496262 THSD7AQ9UPZ6 1657 aa15.64■□□□□ 0.09
RNF220-217ENST00000496262 CABP1Q9NZU7 370 aa15.63■□□□□ 0.09
RNF220-217ENST00000496262 SSH2Q76I76 1423 aa15.62■□□□□ 0.09
RNF220-217ENST00000496262 PSDA5PKW4 1024 aaPredicted RBP15.62■□□□□ 0.09
RNF220-217ENST00000496262 EN1Q05925 392 aaPredicted RBP15.62■□□□□ 0.09
RNF220-217ENST00000496262 LARP1Q6PKG0 1096 aaKnown RBP15.62■□□□□ 0.09
RNF220-217ENST00000496262 NLRP13Q86W25 1043 aa15.62■□□□□ 0.09
RNF220-217ENST00000496262 USP19O94966 1318 aa15.62■□□□□ 0.09
RNF220-217ENST00000496262 ROCK2O75116 1388 aaKnown RBP15.62■□□□□ 0.09
RNF220-217ENST00000496262 CAMTA1Q9Y6Y1 1673 aa15.6■□□□□ 0.09
RNF220-217ENST00000496262 EVC2Q86UK5 1308 aa15.6■□□□□ 0.09
RNF220-217ENST00000496262 TRPM1Q7Z4N2 1603 aa15.6■□□□□ 0.09
RNF220-217ENST00000496262 USP6P35125 1406 aa15.6■□□□□ 0.09
RNF220-217ENST00000496262 TRIM37O94972 964 aa15.59■□□□□ 0.09
RNF220-217ENST00000496262 GCP02774 474 aa15.59■□□□□ 0.09
RNF220-217ENST00000496262 NLRP6P59044 892 aa15.59■□□□□ 0.09
RNF220-217ENST00000496262 RGPD1P0DJD0 1748 aa15.59■□□□□ 0.09
RNF220-217ENST00000496262 CPDO75976 1380 aa15.59■□□□□ 0.09
RNF220-217ENST00000496262 PDE3BQ13370 1112 aa15.57■□□□□ 0.08
RNF220-217ENST00000496262 TCP11L2Q8N4U5 519 aa15.57■□□□□ 0.08
RNF220-217ENST00000496262 LMO7Q8WWI1 1683 aa15.57■□□□□ 0.08
RNF220-217ENST00000496262 SOX12O15370 315 aa15.56■□□□□ 0.08
RNF220-217ENST00000496262 FAM196AQ6ZSG2 479 aa15.56■□□□□ 0.08
RNF220-217ENST00000496262 BARGINQ6ZT62 677 aa15.56■□□□□ 0.08
RNF220-217ENST00000496262 COL5A2P05997 1499 aaPredicted RBP15.56■□□□□ 0.08
RNF220-217ENST00000496262 TNS1Q9HBL0 1735 aaKnown RBP15.55■□□□□ 0.08
RNF220-217ENST00000496262 EZH2Q15910 746 aaKnown RBP15.55■□□□□ 0.08
RNF220-217ENST00000496262 BRD4O60885 1362 aaPredicted RBP15.54■□□□□ 0.08
RNF220-217ENST00000496262 APBA3O96018 575 aa15.54■□□□□ 0.08
RNF220-217ENST00000496262 R3HDM1Q15032 1099 aaKnown RBP15.54■□□□□ 0.08
RNF220-217ENST00000496262 PIK3C2AO00443 1686 aa15.54■□□□□ 0.08
RNF220-217ENST00000496262 SLIT3O75094 1523 aa15.53■□□□□ 0.08
RNF220-217ENST00000496262 DISP2A7MBM2 1401 aa15.51■□□□□ 0.07
RNF220-217ENST00000496262 CRB1P82279 1406 aa15.51■□□□□ 0.07
RNF220-217ENST00000496262 TTC21BQ7Z4L5 1316 aa15.51■□□□□ 0.07
RNF220-217ENST00000496262 TOM1L2Q6ZVM7 507 aa15.51■□□□□ 0.07
RNF220-217ENST00000496262 AATKQ6ZMQ8 1374 aa15.5■□□□□ 0.07
RNF220-217ENST00000496262 CAMKK2Q96RR4 588 aa15.5■□□□□ 0.07
RNF220-217ENST00000496262 CARD11Q9BXL7 1154 aa15.5■□□□□ 0.07
RNF220-217ENST00000496262 THRAP3Q9Y2W1 955 aaKnown RBP15.5■□□□□ 0.07
RNF220-217ENST00000496262 LRP5O75197 1615 aa15.5■□□□□ 0.07
RNF220-217ENST00000496262 KTN1Q86UP2 1357 aaKnown RBP15.49■□□□□ 0.07
RNF220-217ENST00000496262 AXIN2Q9Y2T1 843 aa15.49■□□□□ 0.07
RNF220-217ENST00000496262 CPSF1Q10570 1443 aaKnown RBP15.49■□□□□ 0.07
RNF220-217ENST00000496262 TONSLQ96HA7 1378 aa15.49■□□□□ 0.07
RNF220-217ENST00000496262 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.48■□□□□ 0.07
RNF220-217ENST00000496262 ZNF692Q9BU19 519 aaPredicted RBP15.48■□□□□ 0.07
RNF220-217ENST00000496262 CSB-PGBD3P0DP91 1061 aa15.47■□□□□ 0.07
RNF220-217ENST00000496262 TMC1Q8TDI8 760 aa15.47■□□□□ 0.07
RNF220-217ENST00000496262 AKAP12Q02952 1782 aa15.47■□□□□ 0.07
RNF220-217ENST00000496262 TTC21AQ8NDW8 1320 aa15.46■□□□□ 0.07
RNF220-217ENST00000496262 PARP4Q9UKK3 1724 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms