RNA–Protein interactions for RNA: ENST00000495952.5

SURF1-204, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 2

Gene SURF1, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-204ENST00000495952 PANK1Q8TE04 598 aa12.59□□□□□ -0.39
SURF1-204ENST00000495952 ZNF428Q96B54 188 aa12.59□□□□□ -0.39
SURF1-204ENST00000495952 PPP6R1Q9UPN7 881 aa12.59□□□□□ -0.39
SURF1-204ENST00000495952 FAM135BQ49AJ0 1406 aa12.59□□□□□ -0.39
SURF1-204ENST00000495952 CPS1P31327 1500 aa12.58□□□□□ -0.4
SURF1-204ENST00000495952 C3P01024 1663 aa12.58□□□□□ -0.4
SURF1-204ENST00000495952 GSE1Q14687 1217 aa12.58□□□□□ -0.4
SURF1-204ENST00000495952 TMEM132EQ6IEE7 984 aa12.58□□□□□ -0.4
SURF1-204ENST00000495952 PLEKHF1Q96S99 279 aa12.58□□□□□ -0.4
SURF1-204ENST00000495952 UPF2Q9HAU5 1272 aaKnown RBP12.58□□□□□ -0.4
SURF1-204ENST00000495952 YEATS2Q9ULM3 1422 aa12.58□□□□□ -0.4
SURF1-204ENST00000495952 CDK12Q9NYV4 1490 aaPredicted RBP12.58□□□□□ -0.4
SURF1-204ENST00000495952 KIF16BQ96L93 1317 aa12.58□□□□□ -0.4
SURF1-204ENST00000495952 HDAC1Q13547 482 aaPredicted RBP12.56□□□□□ -0.4
SURF1-204ENST00000495952 TOPAZ1Q8N9V7 1692 aa12.56□□□□□ -0.4
SURF1-204ENST00000495952 U2AF1L5P0DN76 240 aaPredicted RBP12.55□□□□□ -0.4
SURF1-204ENST00000495952 TMPOP42166 694 aaKnown RBP12.55□□□□□ -0.4
SURF1-204ENST00000495952 BRPF1P55201 1214 aaPredicted RBP12.55□□□□□ -0.4
SURF1-204ENST00000495952 U2AF1Q01081 240 aaKnown RBP eCLIP12.55□□□□□ -0.4
SURF1-204ENST00000495952 IDI1Q13907 227 aa12.55□□□□□ -0.4
SURF1-204ENST00000495952 ALDH1L2Q3SY69 923 aa12.55□□□□□ -0.4
SURF1-204ENST00000495952 HDGFL2Q7Z4V5 671 aaPredicted RBP12.55□□□□□ -0.4
SURF1-204ENST00000495952 DZIP1LQ8IYY4 767 aaKnown RBP12.55□□□□□ -0.4
SURF1-204ENST00000495952 FRAT1Q92837 279 aaPredicted RBP12.55□□□□□ -0.4
SURF1-204ENST00000495952 TBC1D32Q96NH3 1257 aa12.55□□□□□ -0.4
SURF1-204ENST00000495952 DDX19BQ9UMR2 479 aa12.55□□□□□ -0.4
SURF1-204ENST00000495952 NALCNQ8IZF0 1738 aa12.54□□□□□ -0.4
SURF1-204ENST00000495952 A2ML1A8K2U0 1454 aa12.54□□□□□ -0.4
SURF1-204ENST00000495952 PDZRN3Q9UPQ7 1066 aa12.54□□□□□ -0.4
SURF1-204ENST00000495952 PCDHB15Q9Y5E8 787 aa12.54□□□□□ -0.4
SURF1-204ENST00000495952 PTCH1Q13635 1447 aa12.54□□□□□ -0.4
SURF1-204ENST00000495952 EDC4Q6P2E9 1401 aaKnown RBP12.54□□□□□ -0.4
SURF1-204ENST00000495952 RLBP1P12271 317 aa12.53□□□□□ -0.4
SURF1-204ENST00000495952 FTSJ3Q8IY81 847 aaKnown RBP12.53□□□□□ -0.4
SURF1-204ENST00000495952 CHMP4BQ9H444 224 aaKnown RBP12.53□□□□□ -0.4
SURF1-204ENST00000495952 CABP2Q9NPB3 220 aa12.53□□□□□ -0.4
SURF1-204ENST00000495952 RRP7AQ9Y3A4 280 aaKnown RBP12.53□□□□□ -0.4
SURF1-204ENST00000495952 RIMS1Q86UR5 1692 aaKnown RBP12.53□□□□□ -0.4
SURF1-204ENST00000495952 PIK3R4Q99570 1358 aa12.53□□□□□ -0.4
SURF1-204ENST00000495952 TECPR2O15040 1411 aa12.53□□□□□ -0.4
SURF1-204ENST00000495952 TNNT2P45379 298 aaPredicted RBP12.52□□□□□ -0.41
SURF1-204ENST00000495952 SRPK2P78362 688 aaKnown RBP12.52□□□□□ -0.41
SURF1-204ENST00000495952 AATKQ6ZMQ8 1374 aa12.52□□□□□ -0.41
SURF1-204ENST00000495952 IPO8O15397 1037 aaKnown RBP12.51□□□□□ -0.41
SURF1-204ENST00000495952 CALD1Q05682 793 aaKnown RBP12.51□□□□□ -0.41
SURF1-204ENST00000495952 NEUROD2Q15784 382 aa12.51□□□□□ -0.41
SURF1-204ENST00000495952 TRIM35Q9UPQ4 493 aa12.51□□□□□ -0.41
SURF1-204ENST00000495952 CPSF1Q10570 1443 aaKnown RBP12.51□□□□□ -0.41
SURF1-204ENST00000495952 FMN2Q9NZ56 1722 aa12.51□□□□□ -0.41
SURF1-204ENST00000495952 FYB1O15117 783 aa12.5□□□□□ -0.41
SURF1-204ENST00000495952 DIAPH1O60610 1272 aaKnown RBP12.5□□□□□ -0.41
SURF1-204ENST00000495952 FCHSD2O94868 740 aa12.5□□□□□ -0.41
SURF1-204ENST00000495952 ATF7IPQ6VMQ6 1270 aa12.5□□□□□ -0.41
SURF1-204ENST00000495952 SMC5Q8IY18 1101 aa12.5□□□□□ -0.41
SURF1-204ENST00000495952 SMC4Q9NTJ3 1288 aa12.5□□□□□ -0.41
SURF1-204ENST00000495952 RGPD1P0DJD0 1748 aa12.49□□□□□ -0.41
SURF1-204ENST00000495952 RIMS2Q9UQ26 1411 aa12.49□□□□□ -0.41
SURF1-204ENST00000495952 KIF24Q5T7B8 1368 aa12.49□□□□□ -0.41
SURF1-204ENST00000495952 RAPGEF3O95398 923 aa12.49□□□□□ -0.41
SURF1-204ENST00000495952 N4BP2Q86UW6 1770 aaPredicted RBP12.48□□□□□ -0.41
SURF1-204ENST00000495952 TRIM27P14373 513 aa12.48□□□□□ -0.41
SURF1-204ENST00000495952 EXOSC9Q06265 439 aaKnown RBP12.48□□□□□ -0.41
SURF1-204ENST00000495952 PRAM1Q96QH2 718 aa12.48□□□□□ -0.41
SURF1-204ENST00000495952 UBR1Q8IWV7 1749 aa12.48□□□□□ -0.41
SURF1-204ENST00000495952 NCOA3Q9Y6Q9 1424 aa12.47□□□□□ -0.41
SURF1-204ENST00000495952 EIF5BO60841 1220 aaKnown RBP12.47□□□□□ -0.41
SURF1-204ENST00000495952 SLC4A3P48751 1232 aa12.47□□□□□ -0.41
SURF1-204ENST00000495952 ARHGAP45Q92619 1136 aa12.47□□□□□ -0.41
SURF1-204ENST00000495952 ANTXR1Q9H6X2 564 aa12.47□□□□□ -0.41
SURF1-204ENST00000495952 POGKQ9P215 609 aa12.47□□□□□ -0.41
SURF1-204ENST00000495952 TSPOAP1O95153 1857 aa12.46□□□□□ -0.41
SURF1-204ENST00000495952 U2SURPO15042 1029 aaKnown RBP12.46□□□□□ -0.41
SURF1-204ENST00000495952 SEC24BO95487 1268 aa12.46□□□□□ -0.41
SURF1-204ENST00000495952 SSH1Q8WYL5 1049 aa12.46□□□□□ -0.41
SURF1-204ENST00000495952 SIRT1Q96EB6 747 aa12.46□□□□□ -0.41
SURF1-204ENST00000495952 GGNBP2Q9H3C7 697 aa12.46□□□□□ -0.41
SURF1-204ENST00000495952 TNNQ9UQP3 1299 aa12.46□□□□□ -0.41
SURF1-204ENST00000495952 USP54Q70EL1 1684 aa12.45□□□□□ -0.42
SURF1-204ENST00000495952 MINK1Q8N4C8 1332 aaPredicted RBP12.45□□□□□ -0.42
SURF1-204ENST00000495952 FRAT2O75474 233 aaPredicted RBP12.45□□□□□ -0.42
SURF1-204ENST00000495952 LMOD3Q0VAK6 560 aa12.45□□□□□ -0.42
SURF1-204ENST00000495952 BCL2L13Q9BXK5 485 aa12.45□□□□□ -0.42
SURF1-204ENST00000495952 RSPH6AQ9H0K4 717 aa12.45□□□□□ -0.42
SURF1-204ENST00000495952 ZBTB40Q9NUA8 1239 aa12.45□□□□□ -0.42
SURF1-204ENST00000495952 RIPK4P57078 832 aa12.44□□□□□ -0.42
SURF1-204ENST00000495952 TSR2Q969E8 191 aaKnown RBP12.44□□□□□ -0.42
SURF1-204ENST00000495952 CDK19Q9BWU1 502 aa12.44□□□□□ -0.42
SURF1-204ENST00000495952 KIF13AQ9H1H9 1805 aa12.44□□□□□ -0.42
SURF1-204ENST00000495952 NFE2L2Q16236 605 aa12.43□□□□□ -0.42
SURF1-204ENST00000495952 L1TD1Q5T7N2 865 aaKnown RBP12.43□□□□□ -0.42
SURF1-204ENST00000495952 ITPRIPQ8IWB1 547 aa12.43□□□□□ -0.42
SURF1-204ENST00000495952 CFAP44Q96MT7 982 aa12.43□□□□□ -0.42
SURF1-204ENST00000495952 TBC1D2Q9BYX2 928 aa12.43□□□□□ -0.42
SURF1-204ENST00000495952 RBM25P49756 843 aaKnown RBP12.42□□□□□ -0.42
SURF1-204ENST00000495952 GNAI1P63096 354 aa12.42□□□□□ -0.42
SURF1-204ENST00000495952 NUCB1Q02818 461 aa12.42□□□□□ -0.42
SURF1-204ENST00000495952 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.42□□□□□ -0.42
SURF1-204ENST00000495952 GCC1Q96CN9 775 aa12.42□□□□□ -0.42
SURF1-204ENST00000495952 IFT57Q9NWB7 429 aa12.42□□□□□ -0.42
SURF1-204ENST00000495952 CACNA1FO60840 1977 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms