RNA–Protein interactions for RNA: ENST00000495530.5

PTPRE-211, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-211ENST00000495530 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.16■□□□□ 0.82
PTPRE-211ENST00000495530 TMC1Q8TDI8 760 aa20.15■□□□□ 0.82
PTPRE-211ENST00000495530 GJD4Q96KN9 370 aaPredicted RBP20.15■□□□□ 0.82
PTPRE-211ENST00000495530 BCL9LQ86UU0 1499 aa20.14■□□□□ 0.81
PTPRE-211ENST00000495530 YY1P25490 414 aa20.14■□□□□ 0.81
PTPRE-211ENST00000495530 NALCNQ8IZF0 1738 aa20.13■□□□□ 0.81
PTPRE-211ENST00000495530 ANKARQ7Z5J8 1434 aa20.11■□□□□ 0.81
PTPRE-211ENST00000495530 SOS2Q07890 1332 aaPredicted RBP20.11■□□□□ 0.81
PTPRE-211ENST00000495530 SLC12A5Q9H2X9 1139 aa20.11■□□□□ 0.81
PTPRE-211ENST00000495530 TERF2IPQ9NYB0 399 aa20.11■□□□□ 0.81
PTPRE-211ENST00000495530 CABP1Q9NZU7 370 aa20.11■□□□□ 0.81
PTPRE-211ENST00000495530 CDC42BPGQ6DT37 1551 aa20.11■□□□□ 0.81
PTPRE-211ENST00000495530 NUTM2FA1L443 756 aa20.1■□□□□ 0.81
PTPRE-211ENST00000495530 PSDA5PKW4 1024 aaPredicted RBP20.1■□□□□ 0.81
PTPRE-211ENST00000495530 PANK3Q9H999 370 aa20.1■□□□□ 0.81
PTPRE-211ENST00000495530 PLEKHG3A1L390 1219 aa20.09■□□□□ 0.81
PTPRE-211ENST00000495530 HDGFL2Q7Z4V5 671 aaPredicted RBP20.09■□□□□ 0.81
PTPRE-211ENST00000495530 ZNF692Q9BU19 519 aaPredicted RBP20.08■□□□□ 0.81
PTPRE-211ENST00000495530 GLI3P10071 1580 aa20.08■□□□□ 0.8
PTPRE-211ENST00000495530 PRR36Q9H6K5 1346 aa20.07■□□□□ 0.8
PTPRE-211ENST00000495530 C1orf167Q5SNV9 1468 aa20.07■□□□□ 0.8
PTPRE-211ENST00000495530 DIEXFQ68CQ4 756 aaKnown RBP20.07■□□□□ 0.8
PTPRE-211ENST00000495530 PPIP5K1Q6PFW1 1433 aa20.07■□□□□ 0.8
PTPRE-211ENST00000495530 ATP7BP35670 1465 aa20.05■□□□□ 0.8
PTPRE-211ENST00000495530 ESCO1Q5FWF5 840 aa20.05■□□□□ 0.8
PTPRE-211ENST00000495530 FMN2Q9NZ56 1722 aa20.05■□□□□ 0.8
PTPRE-211ENST00000495530 IFFO2Q5TF58 517 aa20.04■□□□□ 0.8
PTPRE-211ENST00000495530 NGDNQ8NEJ9 315 aaKnown RBP20.04■□□□□ 0.8
PTPRE-211ENST00000495530 PHF8Q9UPP1 1060 aa20.04■□□□□ 0.8
PTPRE-211ENST00000495530 KNSTRNQ9Y448 316 aa20.04■□□□□ 0.8
PTPRE-211ENST00000495530 ANKRD36BQ8N2N9 1353 aa20.04■□□□□ 0.8
PTPRE-211ENST00000495530 BAG6P46379 1132 aa20.02■□□□□ 0.8
PTPRE-211ENST00000495530 ACEP12821 1306 aa20.02■□□□□ 0.79
PTPRE-211ENST00000495530 PER1O15534 1290 aaPredicted RBP20.01■□□□□ 0.79
PTPRE-211ENST00000495530 PMFBP1Q8TBY8 1022 aa20.01■□□□□ 0.79
PTPRE-211ENST00000495530 UNC5CLQ8IV45 518 aa19.99■□□□□ 0.79
PTPRE-211ENST00000495530 ORAI2Q96SN7 254 aa19.99■□□□□ 0.79
PTPRE-211ENST00000495530 ITSN1Q15811 1721 aa19.99■□□□□ 0.79
PTPRE-211ENST00000495530 POLR3AO14802 1390 aaPredicted RBP19.98■□□□□ 0.79
PTPRE-211ENST00000495530 KTN1Q86UP2 1357 aaKnown RBP19.98■□□□□ 0.79
PTPRE-211ENST00000495530 MYOM1P52179 1685 aa19.98■□□□□ 0.79
PTPRE-211ENST00000495530 CARD14Q9BXL6 1004 aa19.98■□□□□ 0.79
PTPRE-211ENST00000495530 CPSF1Q10570 1443 aaKnown RBP19.98■□□□□ 0.79
PTPRE-211ENST00000495530 USP32Q8NFA0 1604 aa19.98■□□□□ 0.79
PTPRE-211ENST00000495530 A0A1W2PP64 1363 aa19.97■□□□□ 0.79
PTPRE-211ENST00000495530 PSME1Q06323 249 aa19.97■□□□□ 0.79
PTPRE-211ENST00000495530 SLIT2O94813 1529 aa19.97■□□□□ 0.79
PTPRE-211ENST00000495530 SEPT12Q8IYM1 358 aa19.96■□□□□ 0.79
PTPRE-211ENST00000495530 CGNL1Q0VF96 1302 aa19.96■□□□□ 0.79
PTPRE-211ENST00000495530 RGPD1P0DJD0 1748 aa19.96■□□□□ 0.79
PTPRE-211ENST00000495530 BRD4O60885 1362 aaPredicted RBP19.95■□□□□ 0.79
PTPRE-211ENST00000495530 TOPAZ1Q8N9V7 1692 aa19.95■□□□□ 0.78
PTPRE-211ENST00000495530 CD163L1Q9NR16 1453 aa19.95■□□□□ 0.78
PTPRE-211ENST00000495530 ANP32CO43423 234 aa19.95■□□□□ 0.78
PTPRE-211ENST00000495530 RGPD8O14715 1765 aaPredicted RBP19.94■□□□□ 0.78
PTPRE-211ENST00000495530 R3HDM1Q15032 1099 aaKnown RBP19.94■□□□□ 0.78
PTPRE-211ENST00000495530 KRT27Q7Z3Y8 459 aa19.94■□□□□ 0.78
PTPRE-211ENST00000495530 FOXO3O43524 673 aa19.93■□□□□ 0.78
PTPRE-211ENST00000495530 NPHP3Q7Z494 1330 aa19.93■□□□□ 0.78
PTPRE-211ENST00000495530 EDC4Q6P2E9 1401 aaKnown RBP19.93■□□□□ 0.78
PTPRE-211ENST00000495530 NSD3Q9BZ95 1437 aa19.93■□□□□ 0.78
PTPRE-211ENST00000495530 NPC1L1Q9UHC9 1359 aa19.92■□□□□ 0.78
PTPRE-211ENST00000495530 AMER1Q5JTC6 1135 aaPredicted RBP19.91■□□□□ 0.78
PTPRE-211ENST00000495530 TTC21AQ8NDW8 1320 aa19.91■□□□□ 0.78
PTPRE-211ENST00000495530 USP6P35125 1406 aa19.91■□□□□ 0.78
PTPRE-211ENST00000495530 PXDNQ92626 1479 aa19.91■□□□□ 0.78
PTPRE-211ENST00000495530 KRT28Q7Z3Y7 464 aa19.9■□□□□ 0.78
PTPRE-211ENST00000495530 DCAF8L1A6NGE4 600 aa19.89■□□□□ 0.77
PTPRE-211ENST00000495530 ONECUT3O60422 494 aaPredicted RBP19.89■□□□□ 0.77
PTPRE-211ENST00000495530 NSD2O96028 1365 aa19.89■□□□□ 0.77
PTPRE-211ENST00000495530 KIF1AQ12756 1690 aa19.89■□□□□ 0.77
PTPRE-211ENST00000495530 TTC21BQ7Z4L5 1316 aa19.89■□□□□ 0.77
PTPRE-211ENST00000495530 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.89■□□□□ 0.77
PTPRE-211ENST00000495530 NWD2Q9ULI1 1742 aa19.89■□□□□ 0.77
PTPRE-211ENST00000495530 RALBP1Q15311 655 aa19.88■□□□□ 0.77
PTPRE-211ENST00000495530 CC2D1BQ5T0F9 858 aaKnown RBP19.88■□□□□ 0.77
PTPRE-211ENST00000495530 FYB1O15117 783 aa19.87■□□□□ 0.77
PTPRE-211ENST00000495530 PAK3O75914 559 aaPredicted RBP19.87■□□□□ 0.77
PTPRE-211ENST00000495530 EN1Q05925 392 aaPredicted RBP19.87■□□□□ 0.77
PTPRE-211ENST00000495530 AKAP12Q02952 1782 aa19.87■□□□□ 0.77
PTPRE-211ENST00000495530 VPS72Q15906 364 aa19.86■□□□□ 0.77
PTPRE-211ENST00000495530 PRKRIP1Q9H875 184 aaPredicted RBP19.86■□□□□ 0.77
PTPRE-211ENST00000495530 SSH2Q76I76 1423 aa19.85■□□□□ 0.77
PTPRE-211ENST00000495530 PLCH1Q4KWH8 1693 aa19.85■□□□□ 0.77
PTPRE-211ENST00000495530 CNGB1Q14028 1251 aaPredicted RBP19.84■□□□□ 0.77
PTPRE-211ENST00000495530 MORC1Q86VD1 984 aa19.84■□□□□ 0.77
PTPRE-211ENST00000495530 ABTB2Q8N961 1025 aa19.84■□□□□ 0.77
PTPRE-211ENST00000495530 COG3Q96JB2 828 aa19.84■□□□□ 0.77
PTPRE-211ENST00000495530 TNS1Q9HBL0 1735 aaKnown RBP19.84■□□□□ 0.77
PTPRE-211ENST00000495530 DISP2A7MBM2 1401 aa19.84■□□□□ 0.77
PTPRE-211ENST00000495530 MON2Q7Z3U7 1717 aa19.83■□□□□ 0.77
PTPRE-211ENST00000495530 SENP3-EIF4A1A0A087X0R7 540 aa19.83■□□□□ 0.77
PTPRE-211ENST00000495530 GGNBP2Q9H3C7 697 aa19.83■□□□□ 0.77
PTPRE-211ENST00000495530 NME9Q86XW9 330 aa19.82■□□□□ 0.76
PTPRE-211ENST00000495530 CCDC9Q9Y3X0 531 aaKnown RBP19.82■□□□□ 0.76
PTPRE-211ENST00000495530 SBNO1A3KN83 1393 aa19.82■□□□□ 0.76
PTPRE-211ENST00000495530 XPCQ01831 940 aaPredicted RBP19.81■□□□□ 0.76
PTPRE-211ENST00000495530 NLRP6P59044 892 aa19.8■□□□□ 0.76
PTPRE-211ENST00000495530 NLRP13Q86W25 1043 aa19.8■□□□□ 0.76
PTPRE-211ENST00000495530 A0A0G2JS52 829 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms