RNA–Protein interactions for RNA: ENST00000495519.1

KDM5C-213, Transcript of lysine demethylase 5C, humanhuman

TSL 3

Gene KDM5C, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-213ENST00000495519 SLIT2O94813 1529 aa16.54■□□□□ 0.24
KDM5C-213ENST00000495519 RGS12O14924 1447 aa16.53■□□□□ 0.24
KDM5C-213ENST00000495519 PPIP5K1Q6PFW1 1433 aa16.53■□□□□ 0.24
KDM5C-213ENST00000495519 UNC5CLQ8IV45 518 aa16.53■□□□□ 0.24
KDM5C-213ENST00000495519 CARD11Q9BXL7 1154 aa16.52■□□□□ 0.24
KDM5C-213ENST00000495519 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.52■□□□□ 0.24
KDM5C-213ENST00000495519 RALGAPBQ86X10 1494 aa16.52■□□□□ 0.23
KDM5C-213ENST00000495519 GJD4Q96KN9 370 aaPredicted RBP16.5■□□□□ 0.23
KDM5C-213ENST00000495519 SBNO2Q9Y2G9 1366 aa16.49■□□□□ 0.23
KDM5C-213ENST00000495519 NWD2Q9ULI1 1742 aa16.48■□□□□ 0.23
KDM5C-213ENST00000495519 FAM83GA6ND36 823 aa16.48■□□□□ 0.23
KDM5C-213ENST00000495519 CABP1Q9NZU7 370 aa16.48■□□□□ 0.23
KDM5C-213ENST00000495519 BRD4O60885 1362 aaPredicted RBP16.48■□□□□ 0.23
KDM5C-213ENST00000495519 PLCH1Q4KWH8 1693 aa16.47■□□□□ 0.23
KDM5C-213ENST00000495519 CRYBG1Q9Y4K1 1723 aa16.47■□□□□ 0.23
KDM5C-213ENST00000495519 VPS72Q15906 364 aa16.46■□□□□ 0.23
KDM5C-213ENST00000495519 ABTB2Q8N961 1025 aa16.46■□□□□ 0.23
KDM5C-213ENST00000495519 UPF1Q92900 1129 aaKnown RBP eCLIP16.46■□□□□ 0.23
KDM5C-213ENST00000495519 ATAD2Q6PL18 1390 aa16.46■□□□□ 0.23
KDM5C-213ENST00000495519 CLSPNQ9HAW4 1339 aa16.45■□□□□ 0.22
KDM5C-213ENST00000495519 NUTM2GQ5VZR2 741 aa16.45■□□□□ 0.22
KDM5C-213ENST00000495519 PCGF6Q9BYE7 350 aa16.45■□□□□ 0.22
KDM5C-213ENST00000495519 PRDM11Q9NQV5 511 aa16.45■□□□□ 0.22
KDM5C-213ENST00000495519 COL14A1Q05707 1796 aaKnown RBP16.45■□□□□ 0.22
KDM5C-213ENST00000495519 USP6P35125 1406 aa16.45■□□□□ 0.22
KDM5C-213ENST00000495519 BTG4Q9NY30 223 aa16.44■□□□□ 0.22
KDM5C-213ENST00000495519 CCDC9Q9Y3X0 531 aaKnown RBP16.44■□□□□ 0.22
KDM5C-213ENST00000495519 NLRP13Q86W25 1043 aa16.43■□□□□ 0.22
KDM5C-213ENST00000495519 ZNF692Q9BU19 519 aaPredicted RBP16.43■□□□□ 0.22
KDM5C-213ENST00000495519 GLI3P10071 1580 aa16.43■□□□□ 0.22
KDM5C-213ENST00000495519 PHRF1Q9P1Y6 1649 aaKnown RBP16.42■□□□□ 0.22
KDM5C-213ENST00000495519 TIMELESSQ9UNS1 1208 aa16.42■□□□□ 0.22
KDM5C-213ENST00000495519 KIAA0232Q92628 1395 aa16.41■□□□□ 0.22
KDM5C-213ENST00000495519 NRAPQ86VF7 1730 aa16.41■□□□□ 0.22
KDM5C-213ENST00000495519 USP19O94966 1318 aa16.41■□□□□ 0.22
KDM5C-213ENST00000495519 SSH2Q76I76 1423 aa16.39■□□□□ 0.21
KDM5C-213ENST00000495519 SLC24A1O60721 1099 aa16.39■□□□□ 0.21
KDM5C-213ENST00000495519 ZC3H6P61129 1189 aaKnown RBP16.39■□□□□ 0.21
KDM5C-213ENST00000495519 CPDO75976 1380 aa16.38■□□□□ 0.21
KDM5C-213ENST00000495519 NRKQ7Z2Y5 1582 aa16.38■□□□□ 0.21
KDM5C-213ENST00000495519 ONECUT3O60422 494 aaPredicted RBP16.38■□□□□ 0.21
KDM5C-213ENST00000495519 NLRP6P59044 892 aa16.38■□□□□ 0.21
KDM5C-213ENST00000495519 CHRNA2Q15822 529 aa16.38■□□□□ 0.21
KDM5C-213ENST00000495519 CPSF1Q10570 1443 aaKnown RBP16.37■□□□□ 0.21
KDM5C-213ENST00000495519 AKAP12Q02952 1782 aa16.37■□□□□ 0.21
KDM5C-213ENST00000495519 GCP02774 474 aa16.37■□□□□ 0.21
KDM5C-213ENST00000495519 SEPT12Q8IYM1 358 aa16.37■□□□□ 0.21
KDM5C-213ENST00000495519 PUS7Q96PZ0 661 aaKnown RBP16.37■□□□□ 0.21
KDM5C-213ENST00000495519 TTC21AQ8NDW8 1320 aa16.37■□□□□ 0.21
KDM5C-213ENST00000495519 ST20-MTHFSA0A0A6YYL1 179 aa16.36■□□□□ 0.21
KDM5C-213ENST00000495519 TTC21BQ7Z4L5 1316 aa16.36■□□□□ 0.21
KDM5C-213ENST00000495519 KTN1Q86UP2 1357 aaKnown RBP16.36■□□□□ 0.21
KDM5C-213ENST00000495519 TMC1Q8TDI8 760 aa16.35■□□□□ 0.21
KDM5C-213ENST00000495519 TESK2Q96S53 571 aa16.35■□□□□ 0.21
KDM5C-213ENST00000495519 SPATA31A5Q5VU36 1347 aa16.35■□□□□ 0.21
KDM5C-213ENST00000495519 SPATA31A7Q8IWB4 1347 aa16.35■□□□□ 0.21
KDM5C-213ENST00000495519 PIK3C2AO00443 1686 aa16.34■□□□□ 0.21
KDM5C-213ENST00000495519 A0A0G2JS52 829 aa16.34■□□□□ 0.21
KDM5C-213ENST00000495519 EVA1CP58658 441 aa16.34■□□□□ 0.21
KDM5C-213ENST00000495519 MYT1Q01538 1121 aa16.34■□□□□ 0.21
KDM5C-213ENST00000495519 USP47Q96K76 1375 aa16.34■□□□□ 0.21
KDM5C-213ENST00000495519 SLIT3O75094 1523 aa16.34■□□□□ 0.21
KDM5C-213ENST00000495519 FAM98CQ17RN3 349 aaKnown RBP16.33■□□□□ 0.2
KDM5C-213ENST00000495519 HDGFL2Q7Z4V5 671 aaPredicted RBP16.33■□□□□ 0.2
KDM5C-213ENST00000495519 CCDC125Q86Z20 511 aa16.33■□□□□ 0.2
KDM5C-213ENST00000495519 STRN4Q9NRL3 753 aa16.33■□□□□ 0.2
KDM5C-213ENST00000495519 MON2Q7Z3U7 1717 aa16.32■□□□□ 0.2
KDM5C-213ENST00000495519 KRT27Q7Z3Y8 459 aa16.32■□□□□ 0.2
KDM5C-213ENST00000495519 CCER1Q8TC90 406 aaPredicted RBP16.32■□□□□ 0.2
KDM5C-213ENST00000495519 TERF2IPQ9NYB0 399 aa16.32■□□□□ 0.2
KDM5C-213ENST00000495519 NINLQ9Y2I6 1382 aa16.32■□□□□ 0.2
KDM5C-213ENST00000495519 LMO7Q8WWI1 1683 aa16.31■□□□□ 0.2
KDM5C-213ENST00000495519 CD163L1Q9NR16 1453 aa16.31■□□□□ 0.2
KDM5C-213ENST00000495519 SPATA31A1Q5TZJ5 1347 aa16.31■□□□□ 0.2
KDM5C-213ENST00000495519 KCNH5Q8NCM2 988 aa16.31■□□□□ 0.2
KDM5C-213ENST00000495519 SLC12A5Q9H2X9 1139 aa16.31■□□□□ 0.2
KDM5C-213ENST00000495519 BRWD3Q6RI45 1802 aa16.31■□□□□ 0.2
KDM5C-213ENST00000495519 CAMTA1Q9Y6Y1 1673 aa16.3■□□□□ 0.2
KDM5C-213ENST00000495519 AATKQ6ZMQ8 1374 aa16.3■□□□□ 0.2
KDM5C-213ENST00000495519 ZBTB7CA1YPR0 619 aa16.29■□□□□ 0.2
KDM5C-213ENST00000495519 TMF1P82094 1093 aa16.29■□□□□ 0.2
KDM5C-213ENST00000495519 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.29■□□□□ 0.2
KDM5C-213ENST00000495519 EDC4Q6P2E9 1401 aaKnown RBP16.28■□□□□ 0.2
KDM5C-213ENST00000495519 A0A1W2PP64 1363 aa16.28■□□□□ 0.2
KDM5C-213ENST00000495519 COL5A2P05997 1499 aaPredicted RBP16.28■□□□□ 0.2
KDM5C-213ENST00000495519 BLMP54132 1417 aaPredicted RBP16.28■□□□□ 0.2
KDM5C-213ENST00000495519 USP31Q70CQ4 1352 aa16.27■□□□□ 0.2
KDM5C-213ENST00000495519 LARP1Q6PKG0 1096 aaKnown RBP16.27■□□□□ 0.2
KDM5C-213ENST00000495519 USP35Q9P2H5 1018 aa16.27■□□□□ 0.2
KDM5C-213ENST00000495519 THSD7AQ9UPZ6 1657 aa16.27■□□□□ 0.19
KDM5C-213ENST00000495519 EP400Q96L91 3159 aa16.26■□□□□ 0.19
KDM5C-213ENST00000495519 CDCA8Q53HL2 280 aa16.26■□□□□ 0.19
KDM5C-213ENST00000495519 BARGINQ6ZT62 677 aa16.26■□□□□ 0.19
KDM5C-213ENST00000495519 ARHGEF25Q86VW2 580 aa16.26■□□□□ 0.19
KDM5C-213ENST00000495519 TCP11L2Q8N4U5 519 aa16.26■□□□□ 0.19
KDM5C-213ENST00000495519 SOX12O15370 315 aa16.25■□□□□ 0.19
KDM5C-213ENST00000495519 SF3B2Q13435 895 aaKnown RBP16.25■□□□□ 0.19
KDM5C-213ENST00000495519 NME9Q86XW9 330 aa16.25■□□□□ 0.19
KDM5C-213ENST00000495519 THRAP3Q9Y2W1 955 aaKnown RBP16.25■□□□□ 0.19
KDM5C-213ENST00000495519 CRB1P82279 1406 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms