RNA–Protein interactions for RNA: ENST00000495491.5

HCLS1-211, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 2

Gene HCLS1, Length 1,219 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-211ENST00000495491 BRD4O60885 1362 aaPredicted RBP18.59■□□□□ 0.57
HCLS1-211ENST00000495491 ITSN1Q15811 1721 aa18.59■□□□□ 0.57
HCLS1-211ENST00000495491 PLCH1Q4KWH8 1693 aa18.59■□□□□ 0.57
HCLS1-211ENST00000495491 COL14A1Q05707 1796 aaKnown RBP18.58■□□□□ 0.56
HCLS1-211ENST00000495491 NBPF8Q3BBV2 869 aa18.57■□□□□ 0.56
HCLS1-211ENST00000495491 BTG4Q9NY30 223 aa18.57■□□□□ 0.56
HCLS1-211ENST00000495491 CRYBG1Q9Y4K1 1723 aa18.57■□□□□ 0.56
HCLS1-211ENST00000495491 ACEP12821 1306 aa18.56■□□□□ 0.56
HCLS1-211ENST00000495491 NRAPQ86VF7 1730 aa18.56■□□□□ 0.56
HCLS1-211ENST00000495491 TOPAZ1Q8N9V7 1692 aa18.56■□□□□ 0.56
HCLS1-211ENST00000495491 SPATA31A5Q5VU36 1347 aa18.55■□□□□ 0.56
HCLS1-211ENST00000495491 SPATA31A7Q8IWB4 1347 aa18.55■□□□□ 0.56
HCLS1-211ENST00000495491 CENPJQ9HC77 1338 aaPredicted RBP18.55■□□□□ 0.56
HCLS1-211ENST00000495491 KRT27Q7Z3Y8 459 aa18.55■□□□□ 0.56
HCLS1-211ENST00000495491 L3MBTL2Q969R5 705 aa18.54■□□□□ 0.56
HCLS1-211ENST00000495491 ZRANB1Q9UGI0 708 aa18.54■□□□□ 0.56
HCLS1-211ENST00000495491 USP19O94966 1318 aa18.53■□□□□ 0.56
HCLS1-211ENST00000495491 PAK3O75914 559 aaPredicted RBP18.53■□□□□ 0.56
HCLS1-211ENST00000495491 PRDM11Q9NQV5 511 aa18.53■□□□□ 0.56
HCLS1-211ENST00000495491 CPDO75976 1380 aa18.53■□□□□ 0.56
HCLS1-211ENST00000495491 CCDC9Q9Y3X0 531 aaKnown RBP18.51■□□□□ 0.55
HCLS1-211ENST00000495491 KIAA0232Q92628 1395 aa18.51■□□□□ 0.55
HCLS1-211ENST00000495491 BRWD3Q6RI45 1802 aa18.49■□□□□ 0.55
HCLS1-211ENST00000495491 FAM98CQ17RN3 349 aaKnown RBP18.49■□□□□ 0.55
HCLS1-211ENST00000495491 SPATA31A1Q5TZJ5 1347 aa18.49■□□□□ 0.55
HCLS1-211ENST00000495491 PPIP5K1Q6PFW1 1433 aa18.48■□□□□ 0.55
HCLS1-211ENST00000495491 SSH2Q76I76 1423 aa18.47■□□□□ 0.55
HCLS1-211ENST00000495491 THSD7AQ9UPZ6 1657 aa18.47■□□□□ 0.55
HCLS1-211ENST00000495491 PLEKHG5O94827 1062 aa18.46■□□□□ 0.55
HCLS1-211ENST00000495491 SRPK2P78362 688 aaKnown RBP18.46■□□□□ 0.55
HCLS1-211ENST00000495491 SF3B2Q13435 895 aaKnown RBP18.46■□□□□ 0.55
HCLS1-211ENST00000495491 BARGINQ6ZT62 677 aa18.46■□□□□ 0.55
HCLS1-211ENST00000495491 NLRP13Q86W25 1043 aa18.46■□□□□ 0.55
HCLS1-211ENST00000495491 ABTB2Q8N961 1025 aa18.46■□□□□ 0.55
HCLS1-211ENST00000495491 DISP2A7MBM2 1401 aa18.46■□□□□ 0.55
HCLS1-211ENST00000495491 PHRF1Q9P1Y6 1649 aaKnown RBP18.45■□□□□ 0.54
HCLS1-211ENST00000495491 USP6P35125 1406 aa18.44■□□□□ 0.54
HCLS1-211ENST00000495491 CABP2Q9NPB3 220 aa18.44■□□□□ 0.54
HCLS1-211ENST00000495491 EVC2Q86UK5 1308 aa18.44■□□□□ 0.54
HCLS1-211ENST00000495491 SBNO2Q9Y2G9 1366 aa18.43■□□□□ 0.54
HCLS1-211ENST00000495491 NRKQ7Z2Y5 1582 aa18.43■□□□□ 0.54
HCLS1-211ENST00000495491 GCP02774 474 aa18.43■□□□□ 0.54
HCLS1-211ENST00000495491 DEFB132Q7Z7B7 95 aa18.43■□□□□ 0.54
HCLS1-211ENST00000495491 SIN3AQ96ST3 1273 aa18.43■□□□□ 0.54
HCLS1-211ENST00000495491 TRPM1Q7Z4N2 1603 aa18.42■□□□□ 0.54
HCLS1-211ENST00000495491 ZC3H6P61129 1189 aaKnown RBP18.42■□□□□ 0.54
HCLS1-211ENST00000495491 CHRNA2Q15822 529 aa18.42■□□□□ 0.54
HCLS1-211ENST00000495491 CABP1Q9NZU7 370 aa18.42■□□□□ 0.54
HCLS1-211ENST00000495491 LMO7Q8WWI1 1683 aa18.41■□□□□ 0.54
HCLS1-211ENST00000495491 BAG6P46379 1132 aa18.41■□□□□ 0.54
HCLS1-211ENST00000495491 ZNF692Q9BU19 519 aaPredicted RBP18.41■□□□□ 0.54
HCLS1-211ENST00000495491 THRAP3Q9Y2W1 955 aaKnown RBP18.41■□□□□ 0.54
HCLS1-211ENST00000495491 ROCK2O75116 1388 aaKnown RBP18.41■□□□□ 0.54
HCLS1-211ENST00000495491 QRICH2Q9H0J4 1663 aa18.41■□□□□ 0.54
HCLS1-211ENST00000495491 CAMTA1Q9Y6Y1 1673 aa18.41■□□□□ 0.54
HCLS1-211ENST00000495491 NUTM2GQ5VZR2 741 aa18.4■□□□□ 0.54
HCLS1-211ENST00000495491 AATKQ6ZMQ8 1374 aa18.4■□□□□ 0.54
HCLS1-211ENST00000495491 SLIT3O75094 1523 aa18.39■□□□□ 0.54
HCLS1-211ENST00000495491 A0A0G2JS52 829 aa18.38■□□□□ 0.53
HCLS1-211ENST00000495491 MYT1Q01538 1121 aa18.38■□□□□ 0.53
HCLS1-211ENST00000495491 FAM196AQ6ZSG2 479 aa18.38■□□□□ 0.53
HCLS1-211ENST00000495491 TCP11L2Q8N4U5 519 aa18.37■□□□□ 0.53
HCLS1-211ENST00000495491 CPSF1Q10570 1443 aaKnown RBP18.37■□□□□ 0.53
HCLS1-211ENST00000495491 C11orf95C9JLR9 678 aaPredicted RBP18.36■□□□□ 0.53
HCLS1-211ENST00000495491 COL5A2P05997 1499 aaPredicted RBP18.36■□□□□ 0.53
HCLS1-211ENST00000495491 EVA1CP58658 441 aa18.36■□□□□ 0.53
HCLS1-211ENST00000495491 LARP1Q6PKG0 1096 aaKnown RBP18.36■□□□□ 0.53
HCLS1-211ENST00000495491 TTC21AQ8NDW8 1320 aa18.36■□□□□ 0.53
HCLS1-211ENST00000495491 PARD3Q8TEW0 1356 aa18.36■□□□□ 0.53
HCLS1-211ENST00000495491 STRN4Q9NRL3 753 aa18.36■□□□□ 0.53
HCLS1-211ENST00000495491 NLRP6P59044 892 aa18.35■□□□□ 0.53
HCLS1-211ENST00000495491 PUS7Q96PZ0 661 aaKnown RBP18.35■□□□□ 0.53
HCLS1-211ENST00000495491 NEUROD1Q13562 356 aa18.34■□□□□ 0.53
HCLS1-211ENST00000495491 TTC21BQ7Z4L5 1316 aa18.33■□□□□ 0.53
HCLS1-211ENST00000495491 RGPD1P0DJD0 1748 aa18.33■□□□□ 0.52
HCLS1-211ENST00000495491 CRB1P82279 1406 aa18.32■□□□□ 0.52
HCLS1-211ENST00000495491 KCNH5Q8NCM2 988 aa18.32■□□□□ 0.52
HCLS1-211ENST00000495491 ARHGEF25Q86VW2 580 aa18.31■□□□□ 0.52
HCLS1-211ENST00000495491 CAMKK2Q96RR4 588 aa18.31■□□□□ 0.52
HCLS1-211ENST00000495491 EN1Q05925 392 aaPredicted RBP18.3■□□□□ 0.52
HCLS1-211ENST00000495491 PIK3C2AO00443 1686 aa18.3■□□□□ 0.52
HCLS1-211ENST00000495491 USP31Q70CQ4 1352 aa18.3■□□□□ 0.52
HCLS1-211ENST00000495491 ABCC6O95255 1503 aa18.29■□□□□ 0.52
HCLS1-211ENST00000495491 PDE3BQ13370 1112 aa18.29■□□□□ 0.52
HCLS1-211ENST00000495491 FAM182BQ5T319 152 aa18.29■□□□□ 0.52
HCLS1-211ENST00000495491 BCL9O00512 1426 aa18.29■□□□□ 0.52
HCLS1-211ENST00000495491 LRP5O75197 1615 aa18.28■□□□□ 0.52
HCLS1-211ENST00000495491 CDCA7Q9BWT1 371 aaPredicted RBP18.28■□□□□ 0.52
HCLS1-211ENST00000495491 TNS1Q9HBL0 1735 aaKnown RBP18.28■□□□□ 0.52
HCLS1-211ENST00000495491 COL18A1P39060 1754 aa18.27■□□□□ 0.52
HCLS1-211ENST00000495491 WDR17Q8IZU2 1322 aa18.27■□□□□ 0.52
HCLS1-211ENST00000495491 CARD11Q9BXL7 1154 aa18.27■□□□□ 0.52
HCLS1-211ENST00000495491 USP35Q9P2H5 1018 aa18.27■□□□□ 0.52
HCLS1-211ENST00000495491 PARP4Q9UKK3 1724 aaKnown RBP18.26■□□□□ 0.51
HCLS1-211ENST00000495491 SLC24A1O60721 1099 aa18.26■□□□□ 0.51
HCLS1-211ENST00000495491 TRIM37O94972 964 aa18.26■□□□□ 0.51
HCLS1-211ENST00000495491 AKAP12Q02952 1782 aa18.26■□□□□ 0.51
HCLS1-211ENST00000495491 KTN1Q86UP2 1357 aaKnown RBP18.26■□□□□ 0.51
HCLS1-211ENST00000495491 AXIN2Q9Y2T1 843 aa18.25■□□□□ 0.51
HCLS1-211ENST00000495491 CD163L1Q9NR16 1453 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms