RNA–Protein interactions for RNA: ENST00000495460.1

NUP58-214, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-214ENST00000495460 BRWD3Q6RI45 1802 aa22.08■■□□□ 1.12
NUP58-214ENST00000495460 TRPM3Q9HCF6 1732 aaPredicted RBP22.07■■□□□ 1.12
NUP58-214ENST00000495460 WASLO00401 505 aaPredicted RBP22.07■■□□□ 1.12
NUP58-214ENST00000495460 KRT27Q7Z3Y8 459 aa22.07■■□□□ 1.12
NUP58-214ENST00000495460 TULP4Q9NRJ4 1543 aa22.06■■□□□ 1.12
NUP58-214ENST00000495460 SF3B2Q13435 895 aaKnown RBP22.06■■□□□ 1.12
NUP58-214ENST00000495460 SAFB2Q14151 953 aaKnown RBP eCLIP22.06■■□□□ 1.12
NUP58-214ENST00000495460 PMFBP1Q8TBY8 1022 aa22.06■■□□□ 1.12
NUP58-214ENST00000495460 ALS2Q96Q42 1657 aa22.06■■□□□ 1.12
NUP58-214ENST00000495460 TRAK1Q9UPV9 953 aa22.05■■□□□ 1.12
NUP58-214ENST00000495460 LMOD2Q6P5Q4 547 aa22.04■■□□□ 1.12
NUP58-214ENST00000495460 DCAF11Q8TEB1 546 aa22.04■■□□□ 1.12
NUP58-214ENST00000495460 COL14A1Q05707 1796 aaKnown RBP22.03■■□□□ 1.12
NUP58-214ENST00000495460 PRR36Q9H6K5 1346 aa22.02■■□□□ 1.12
NUP58-214ENST00000495460 POTEHQ6S545 545 aa22.01■■□□□ 1.11
NUP58-214ENST00000495460 BTG4Q9NY30 223 aa22.01■■□□□ 1.11
NUP58-214ENST00000495460 NRAPQ86VF7 1730 aa22■■□□□ 1.11
NUP58-214ENST00000495460 CCDC9Q9Y3X0 531 aaKnown RBP22■■□□□ 1.11
NUP58-214ENST00000495460 MINK1Q8N4C8 1332 aaPredicted RBP21.99■■□□□ 1.11
NUP58-214ENST00000495460 ABCB7O75027 752 aa21.98■■□□□ 1.11
NUP58-214ENST00000495460 NGDNQ8NEJ9 315 aaKnown RBP21.98■■□□□ 1.11
NUP58-214ENST00000495460 HIRIP3Q9BW71 556 aaPredicted RBP21.98■■□□□ 1.11
NUP58-214ENST00000495460 SPATA31A5Q5VU36 1347 aa21.98■■□□□ 1.11
NUP58-214ENST00000495460 SPATA31A7Q8IWB4 1347 aa21.98■■□□□ 1.11
NUP58-214ENST00000495460 DEFB132Q7Z7B7 95 aa21.97■■□□□ 1.11
NUP58-214ENST00000495460 KDM2AQ9Y2K7 1162 aa21.97■■□□□ 1.11
NUP58-214ENST00000495460 BAG6P46379 1132 aa21.96■■□□□ 1.11
NUP58-214ENST00000495460 ITSN1Q15811 1721 aa21.95■■□□□ 1.1
NUP58-214ENST00000495460 CRYBG1Q9Y4K1 1723 aa21.95■■□□□ 1.1
NUP58-214ENST00000495460 NUDT16Q96DE0 195 aaKnown RBP21.95■■□□□ 1.1
NUP58-214ENST00000495460 FAM98CQ17RN3 349 aaKnown RBP21.94■■□□□ 1.1
NUP58-214ENST00000495460 POLR3AO14802 1390 aaPredicted RBP21.94■■□□□ 1.1
NUP58-214ENST00000495460 ATP7BP35670 1465 aa21.94■■□□□ 1.1
NUP58-214ENST00000495460 PLEKHG3A1L390 1219 aa21.93■■□□□ 1.1
NUP58-214ENST00000495460 DISP2A7MBM2 1401 aa21.93■■□□□ 1.1
NUP58-214ENST00000495460 ARHGEF28Q8N1W1 1705 aaKnown RBP21.92■■□□□ 1.1
NUP58-214ENST00000495460 CCDC61Q9Y6R9 512 aa21.92■■□□□ 1.1
NUP58-214ENST00000495460 KIAA1210Q9ULL0 1709 aa21.92■■□□□ 1.1
NUP58-214ENST00000495460 PRDM11Q9NQV5 511 aa21.91■■□□□ 1.1
NUP58-214ENST00000495460 LRP5O75197 1615 aa21.91■■□□□ 1.1
NUP58-214ENST00000495460 THSD7AQ9UPZ6 1657 aa21.9■■□□□ 1.1
NUP58-214ENST00000495460 BRD4O60885 1362 aaPredicted RBP21.89■■□□□ 1.1
NUP58-214ENST00000495460 PAK3O75914 559 aaPredicted RBP21.89■■□□□ 1.09
NUP58-214ENST00000495460 CDK19Q9BWU1 502 aa21.89■■□□□ 1.09
NUP58-214ENST00000495460 SPATA31A1Q5TZJ5 1347 aa21.88■■□□□ 1.09
NUP58-214ENST00000495460 NBPF8Q3BBV2 869 aa21.88■■□□□ 1.09
NUP58-214ENST00000495460 RGPD1P0DJD0 1748 aa21.88■■□□□ 1.09
NUP58-214ENST00000495460 PLEKHG5O94827 1062 aa21.86■■□□□ 1.09
NUP58-214ENST00000495460 FAM196AQ6ZSG2 479 aa21.86■■□□□ 1.09
NUP58-214ENST00000495460 BARGINQ6ZT62 677 aa21.86■■□□□ 1.09
NUP58-214ENST00000495460 CPDO75976 1380 aa21.86■■□□□ 1.09
NUP58-214ENST00000495460 KIAA0232Q92628 1395 aa21.86■■□□□ 1.09
NUP58-214ENST00000495460 A0A0G2JS52 829 aa21.85■■□□□ 1.09
NUP58-214ENST00000495460 MYT1Q01538 1121 aa21.85■■□□□ 1.09
NUP58-214ENST00000495460 ACEP12821 1306 aa21.84■■□□□ 1.09
NUP58-214ENST00000495460 ZNF219Q9P2Y4 722 aaPredicted RBP21.84■■□□□ 1.09
NUP58-214ENST00000495460 PARD3Q8TEW0 1356 aa21.84■■□□□ 1.09
NUP58-214ENST00000495460 TOPAZ1Q8N9V7 1692 aa21.83■■□□□ 1.09
NUP58-214ENST00000495460 PHRF1Q9P1Y6 1649 aaKnown RBP21.82■■□□□ 1.08
NUP58-214ENST00000495460 C11orf95C9JLR9 678 aaPredicted RBP21.82■■□□□ 1.08
NUP58-214ENST00000495460 THRAP3Q9Y2W1 955 aaKnown RBP21.81■■□□□ 1.08
NUP58-214ENST00000495460 USP19O94966 1318 aa21.8■■□□□ 1.08
NUP58-214ENST00000495460 EN1Q05925 392 aaPredicted RBP21.79■■□□□ 1.08
NUP58-214ENST00000495460 CAMKK2Q96RR4 588 aa21.79■■□□□ 1.08
NUP58-214ENST00000495460 NLRP13Q86W25 1043 aa21.78■■□□□ 1.08
NUP58-214ENST00000495460 ABTB2Q8N961 1025 aa21.78■■□□□ 1.08
NUP58-214ENST00000495460 EVA1CP58658 441 aa21.77■■□□□ 1.08
NUP58-214ENST00000495460 ZC3H6P61129 1189 aaKnown RBP21.77■■□□□ 1.08
NUP58-214ENST00000495460 SSH2Q76I76 1423 aa21.77■■□□□ 1.08
NUP58-214ENST00000495460 TNS1Q9HBL0 1735 aaKnown RBP21.77■■□□□ 1.08
NUP58-214ENST00000495460 CHRNA2Q15822 529 aa21.76■■□□□ 1.07
NUP58-214ENST00000495460 GCP02774 474 aa21.75■■□□□ 1.07
NUP58-214ENST00000495460 TCP11L2Q8N4U5 519 aa21.75■■□□□ 1.07
NUP58-214ENST00000495460 LMO7Q8WWI1 1683 aa21.75■■□□□ 1.07
NUP58-214ENST00000495460 CAMTA1Q9Y6Y1 1673 aa21.75■■□□□ 1.07
NUP58-214ENST00000495460 NBPF1Q3BBV0 1214 aa21.74■■□□□ 1.07
NUP58-214ENST00000495460 STRN4Q9NRL3 753 aa21.74■■□□□ 1.07
NUP58-214ENST00000495460 CENPJQ9HC77 1338 aaPredicted RBP21.74■■□□□ 1.07
NUP58-214ENST00000495460 PDE3BQ13370 1112 aa21.73■■□□□ 1.07
NUP58-214ENST00000495460 FAM182BQ5T319 152 aa21.73■■□□□ 1.07
NUP58-214ENST00000495460 NRKQ7Z2Y5 1582 aa21.73■■□□□ 1.07
NUP58-214ENST00000495460 PSDA5PKW4 1024 aaPredicted RBP21.72■■□□□ 1.07
NUP58-214ENST00000495460 PPIP5K1Q6PFW1 1433 aa21.72■■□□□ 1.07
NUP58-214ENST00000495460 TRIM37O94972 964 aa21.71■■□□□ 1.07
NUP58-214ENST00000495460 EZH2Q15910 746 aaKnown RBP21.71■■□□□ 1.07
NUP58-214ENST00000495460 SRPK2P78362 688 aaKnown RBP21.7■■□□□ 1.06
NUP58-214ENST00000495460 NUTM2GQ5VZR2 741 aa21.7■■□□□ 1.06
NUP58-214ENST00000495460 LARP1Q6PKG0 1096 aaKnown RBP21.7■■□□□ 1.06
NUP58-214ENST00000495460 APBA3O96018 575 aa21.69■■□□□ 1.06
NUP58-214ENST00000495460 R3HDM1Q15032 1099 aaKnown RBP21.69■■□□□ 1.06
NUP58-214ENST00000495460 AATKQ6ZMQ8 1374 aa21.69■■□□□ 1.06
NUP58-214ENST00000495460 COL5A2P05997 1499 aaPredicted RBP21.67■■□□□ 1.06
NUP58-214ENST00000495460 ZNF692Q9BU19 519 aaPredicted RBP21.67■■□□□ 1.06
NUP58-214ENST00000495460 PARP4Q9UKK3 1724 aaKnown RBP21.66■■□□□ 1.06
NUP58-214ENST00000495460 USP6P35125 1406 aa21.66■■□□□ 1.06
NUP58-214ENST00000495460 CRB1P82279 1406 aa21.66■■□□□ 1.06
NUP58-214ENST00000495460 USP35Q9P2H5 1018 aa21.66■■□□□ 1.06
NUP58-214ENST00000495460 SAMD1Q6SPF0 538 aaPredicted RBP21.65■■□□□ 1.06
NUP58-214ENST00000495460 SLIT3O75094 1523 aa21.65■■□□□ 1.06
NUP58-214ENST00000495460 NBPF14Q5TI25 921 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms