RNA–Protein interactions for RNA: ENST00000495288.5

PSMB4-206, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 986 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-206ENST00000495288 ZRANB1Q9UGI0 708 aa23.63■■□□□ 1.37
PSMB4-206ENST00000495288 AKAP12Q02952 1782 aa23.63■■□□□ 1.37
PSMB4-206ENST00000495288 USP6P35125 1406 aa23.62■■□□□ 1.37
PSMB4-206ENST00000495288 MON2Q7Z3U7 1717 aa23.6■■□□□ 1.37
PSMB4-206ENST00000495288 COG3Q96JB2 828 aa23.6■■□□□ 1.37
PSMB4-206ENST00000495288 C1orf167Q5SNV9 1468 aa23.6■■□□□ 1.37
PSMB4-206ENST00000495288 DCCP43146 1447 aa23.59■■□□□ 1.37
PSMB4-206ENST00000495288 PAK3O75914 559 aaPredicted RBP23.59■■□□□ 1.37
PSMB4-206ENST00000495288 FOXO3O43524 673 aa23.58■■□□□ 1.37
PSMB4-206ENST00000495288 TTC21AQ8NDW8 1320 aa23.58■■□□□ 1.36
PSMB4-206ENST00000495288 PNISRQ8TF01 805 aaKnown RBP23.57■■□□□ 1.36
PSMB4-206ENST00000495288 MST1RQ04912 1400 aa23.57■■□□□ 1.36
PSMB4-206ENST00000495288 XIRP1Q702N8 1843 aaKnown RBP23.56■■□□□ 1.36
PSMB4-206ENST00000495288 KIF20BQ96Q89 1820 aa23.56■■□□□ 1.36
PSMB4-206ENST00000495288 MTHFSP49914 203 aa23.55■■□□□ 1.36
PSMB4-206ENST00000495288 SSH2Q76I76 1423 aa23.54■■□□□ 1.36
PSMB4-206ENST00000495288 XPCQ01831 940 aaPredicted RBP23.54■■□□□ 1.36
PSMB4-206ENST00000495288 KRT28Q7Z3Y7 464 aa23.53■■□□□ 1.36
PSMB4-206ENST00000495288 SLAIN2Q9P270 581 aa23.53■■□□□ 1.36
PSMB4-206ENST00000495288 NUTM2GQ5VZR2 741 aa23.52■■□□□ 1.36
PSMB4-206ENST00000495288 ABTB2Q8N961 1025 aa23.52■■□□□ 1.36
PSMB4-206ENST00000495288 CFAP53Q96M91 514 aa23.52■■□□□ 1.36
PSMB4-206ENST00000495288 FBLN1P23142 703 aa23.51■■□□□ 1.35
PSMB4-206ENST00000495288 NLRP6P59044 892 aa23.51■■□□□ 1.35
PSMB4-206ENST00000495288 ANKRD26Q9UPS8 1709 aa23.5■■□□□ 1.35
PSMB4-206ENST00000495288 NRKQ7Z2Y5 1582 aa23.49■■□□□ 1.35
PSMB4-206ENST00000495288 PPM1GO15355 546 aaPredicted RBP23.48■■□□□ 1.35
PSMB4-206ENST00000495288 SOX12O15370 315 aa23.48■■□□□ 1.35
PSMB4-206ENST00000495288 WDR43Q15061 677 aaKnown RBP eCLIP23.48■■□□□ 1.35
PSMB4-206ENST00000495288 LMOD2Q6P5Q4 547 aa23.48■■□□□ 1.35
PSMB4-206ENST00000495288 SCAF1Q9H7N4 1312 aaKnown RBP23.48■■□□□ 1.35
PSMB4-206ENST00000495288 DDX17Q92841 729 aaKnown RBP23.47■■□□□ 1.35
PSMB4-206ENST00000495288 KIF1AQ12756 1690 aa23.46■■□□□ 1.35
PSMB4-206ENST00000495288 BRINP3Q76B58 766 aa23.46■■□□□ 1.35
PSMB4-206ENST00000495288 LTBP4Q8N2S1 1624 aa23.45■■□□□ 1.34
PSMB4-206ENST00000495288 USP31Q70CQ4 1352 aa23.45■■□□□ 1.34
PSMB4-206ENST00000495288 HNRNPUQ00839 825 aaKnown RBP eCLIP23.45■■□□□ 1.34
PSMB4-206ENST00000495288 POLKQ9UBT6 870 aa23.45■■□□□ 1.34
PSMB4-206ENST00000495288 NPHP3Q7Z494 1330 aa23.43■■□□□ 1.34
PSMB4-206ENST00000495288 PLEKHG5O94827 1062 aa23.43■■□□□ 1.34
PSMB4-206ENST00000495288 OVOS2A0A0J9YW53 1432 aa23.42■■□□□ 1.34
PSMB4-206ENST00000495288 OVOS2Q6IE36 1432 aa23.42■■□□□ 1.34
PSMB4-206ENST00000495288 RRS1Q15050 365 aaKnown RBP23.42■■□□□ 1.34
PSMB4-206ENST00000495288 ADAMTS8Q9UP79 889 aa23.42■■□□□ 1.34
PSMB4-206ENST00000495288 EMILIN1Q9Y6C2 1016 aa23.42■■□□□ 1.34
PSMB4-206ENST00000495288 AATKQ6ZMQ8 1374 aa23.41■■□□□ 1.34
PSMB4-206ENST00000495288 CENPBP07199 599 aaPredicted RBP23.41■■□□□ 1.34
PSMB4-206ENST00000495288 PIK3C2AO00443 1686 aa23.39■■□□□ 1.34
PSMB4-206ENST00000495288 NUDCQ9Y266 331 aa23.38■■□□□ 1.33
PSMB4-206ENST00000495288 SENP3-EIF4A1A0A087X0R7 540 aa23.36■■□□□ 1.33
PSMB4-206ENST00000495288 DIAPH1O60610 1272 aaKnown RBP23.36■■□□□ 1.33
PSMB4-206ENST00000495288 U2SURPO15042 1029 aaKnown RBP23.35■■□□□ 1.33
PSMB4-206ENST00000495288 AMPHP49418 695 aa23.34■■□□□ 1.33
PSMB4-206ENST00000495288 SBNO1A3KN83 1393 aa23.34■■□□□ 1.33
PSMB4-206ENST00000495288 MAP2P11137 1827 aaKnown RBP23.33■■□□□ 1.33
PSMB4-206ENST00000495288 ZBTB7CA1YPR0 619 aa23.33■■□□□ 1.33
PSMB4-206ENST00000495288 U2AF1L5P0DN76 240 aaPredicted RBP23.33■■□□□ 1.33
PSMB4-206ENST00000495288 U2AF1Q01081 240 aaKnown RBP eCLIP23.33■■□□□ 1.337e-7■■■■□ 21.2
PSMB4-206ENST00000495288 MAP3K19Q56UN5 1328 aa23.33■■□□□ 1.32
PSMB4-206ENST00000495288 KCNH5Q8NCM2 988 aa23.32■■□□□ 1.32
PSMB4-206ENST00000495288 TRPM3Q9HCF6 1732 aaPredicted RBP23.32■■□□□ 1.32
PSMB4-206ENST00000495288 PNPLA6Q8IY17 1366 aa23.31■■□□□ 1.32
PSMB4-206ENST00000495288 CCDC146Q8IYE0 955 aa23.31■■□□□ 1.32
PSMB4-206ENST00000495288 SPATA31A3Q5VYP0 1347 aa23.31■■□□□ 1.32
PSMB4-206ENST00000495288 INSRP06213 1382 aa23.3■■□□□ 1.32
PSMB4-206ENST00000495288 TOM1O60784 492 aa23.3■■□□□ 1.32
PSMB4-206ENST00000495288 PXDNQ92626 1479 aa23.3■■□□□ 1.32
PSMB4-206ENST00000495288 GCP02774 474 aa23.29■■□□□ 1.32
PSMB4-206ENST00000495288 SMG6Q86US8 1419 aaKnown RBP23.29■■□□□ 1.32
PSMB4-206ENST00000495288 SALL2Q9Y467 1007 aaPredicted RBP23.29■■□□□ 1.32
PSMB4-206ENST00000495288 SOS2Q07890 1332 aaPredicted RBP23.29■■□□□ 1.32
PSMB4-206ENST00000495288 COL3A1P02461 1466 aaPredicted RBP23.28■■□□□ 1.32
PSMB4-206ENST00000495288 CDK12Q9NYV4 1490 aaPredicted RBP23.28■■□□□ 1.32
PSMB4-206ENST00000495288 TNS3Q68CZ2 1445 aa23.27■■□□□ 1.32
PSMB4-206ENST00000495288 PIP4K2BP78356 416 aa23.27■■□□□ 1.32
PSMB4-206ENST00000495288 HSP90AB2PQ58FF8 381 aa23.27■■□□□ 1.32
PSMB4-206ENST00000495288 MARF1Q9Y4F3 1742 aaKnown RBP23.26■■□□□ 1.31
PSMB4-206ENST00000495288 UBAP1LF5GYI3 381 aa23.26■■□□□ 1.31
PSMB4-206ENST00000495288 IL13P35225 146 aa23.26■■□□□ 1.31
PSMB4-206ENST00000495288 ARHGEF10O15013 1369 aa23.26■■□□□ 1.31
PSMB4-206ENST00000495288 USP54Q70EL1 1684 aa23.25■■□□□ 1.31
PSMB4-206ENST00000495288 BLMP54132 1417 aaPredicted RBP23.25■■□□□ 1.31
PSMB4-206ENST00000495288 CABLES1Q8TDN4 633 aa23.25■■□□□ 1.31
PSMB4-206ENST00000495288 USP19O94966 1318 aa23.25■■□□□ 1.31
PSMB4-206ENST00000495288 SHPRHQ149N8 1683 aa23.25■■□□□ 1.31
PSMB4-206ENST00000495288 ALS2Q96Q42 1657 aa23.23■■□□□ 1.31
PSMB4-206ENST00000495288 EIF4A2Q14240 407 aaKnown RBP23.23■■□□□ 1.31
PSMB4-206ENST00000495288 RUNDC1Q96C34 613 aa23.23■■□□□ 1.31
PSMB4-206ENST00000495288 ZBED9Q6R2W3 1325 aa23.23■■□□□ 1.31
PSMB4-206ENST00000495288 FLT4P35916 1363 aa23.23■■□□□ 1.31
PSMB4-206ENST00000495288 HOXC9P31274 260 aa23.22■■□□□ 1.31
PSMB4-206ENST00000495288 ZC3H6P61129 1189 aaKnown RBP23.22■■□□□ 1.31
PSMB4-206ENST00000495288 CERKQ8TCT0 537 aa23.22■■□□□ 1.31
PSMB4-206ENST00000495288 APAF1O14727 1248 aa23.21■■□□□ 1.31
PSMB4-206ENST00000495288 IP6K1Q92551 441 aa23.21■■□□□ 1.31
PSMB4-206ENST00000495288 LTV1Q96GA3 475 aaPredicted RBP23.21■■□□□ 1.31
PSMB4-206ENST00000495288 PEAK1Q9H792 1746 aa23.2■■□□□ 1.3
PSMB4-206ENST00000495288 SLIT3O75094 1523 aa23.2■■□□□ 1.3
PSMB4-206ENST00000495288 HAP1P54257 671 aaPredicted RBP23.2■■□□□ 1.3
PSMB4-206ENST00000495288 PNNQ9H307 717 aaKnown RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms